RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
TRIM47-202ENST00000585333 OSCARQ8IYS5 282 aa20.81■□□□□ 0.92
TRIM47-202ENST00000585333 IQGAP2Q13576 1575 aa20.79■□□□□ 0.92
TRIM47-202ENST00000585333 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
TRIM47-202ENST00000585333 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
TRIM47-202ENST00000585333 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
TRIM47-202ENST00000585333 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
TRIM47-202ENST00000585333 CLASP1Q7Z460 1538 aa20.71■□□□□ 0.91
TRIM47-202ENST00000585333 UGGT2Q9NYU1 1516 aa20.69■□□□□ 0.9
TRIM47-202ENST00000585333 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
TRIM47-202ENST00000585333 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
TRIM47-202ENST00000585333 JPH4Q96JJ6 628 aa20.66■□□□□ 0.9
TRIM47-202ENST00000585333 CLIP1P30622 1438 aa20.66■□□□□ 0.9
TRIM47-202ENST00000585333 SHROOM2Q13796 1616 aa20.64■□□□□ 0.89
TRIM47-202ENST00000585333 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
TRIM47-202ENST00000585333 PRG4Q92954 1404 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-202ENST00000585333 KIAA0556O60303 1618 aa20.55■□□□□ 0.88
TRIM47-202ENST00000585333 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
TRIM47-202ENST00000585333 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-202ENST00000585333 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
TRIM47-202ENST00000585333 FMN1Q68DA7 1419 aa20.52■□□□□ 0.87
TRIM47-202ENST00000585333 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
TRIM47-202ENST00000585333 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
TRIM47-202ENST00000585333 PTPRGP23470 1445 aa20.43■□□□□ 0.86
TRIM47-202ENST00000585333 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
TRIM47-202ENST00000585333 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
TRIM47-202ENST00000585333 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
TRIM47-202ENST00000585333 FYCO1Q9BQS8 1478 aa20.36■□□□□ 0.85
TRIM47-202ENST00000585333 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
TRIM47-202ENST00000585333 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
TRIM47-202ENST00000585333 HECW1Q76N89 1606 aa20.32■□□□□ 0.84
TRIM47-202ENST00000585333 APLP2Q06481 763 aa20.32■□□□□ 0.84
TRIM47-202ENST00000585333 UACAQ9BZF9 1416 aa20.31■□□□□ 0.84
TRIM47-202ENST00000585333 RIMBP3CA6NJZ7 1639 aa20.31■□□□□ 0.84
TRIM47-202ENST00000585333 RIMBP3BA6NNM3 1639 aa20.31■□□□□ 0.84
TRIM47-202ENST00000585333 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
TRIM47-202ENST00000585333 RIMBP3Q9UFD9 1639 aa20.31■□□□□ 0.84
TRIM47-202ENST00000585333 UHRF1BP1LA0JNW5 1464 aa20.29■□□□□ 0.84
TRIM47-202ENST00000585333 CCDC18Q5T9S5 1454 aa20.28■□□□□ 0.84
TRIM47-202ENST00000585333 ABCA8O94911 1581 aa20.28■□□□□ 0.84
TRIM47-202ENST00000585333 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
TRIM47-202ENST00000585333 PCF11O94913 1555 aaKnown RBP20.27■□□□□ 0.84
TRIM47-202ENST00000585333 ABCC2Q92887 1545 aa20.27■□□□□ 0.83
TRIM47-202ENST00000585333 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
TRIM47-202ENST00000585333 MAP3K1Q13233 1512 aa20.24■□□□□ 0.83
TRIM47-202ENST00000585333 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-202ENST00000585333 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-202ENST00000585333 NPM1P06748 294 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRIM47-202ENST00000585333 NUP153P49790 1475 aaKnown RBP20.19■□□□□ 0.82
TRIM47-202ENST00000585333 EPRSP07814 1512 aaKnown RBP20.18■□□□□ 0.82
TRIM47-202ENST00000585333 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
TRIM47-202ENST00000585333 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
TRIM47-202ENST00000585333 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
TRIM47-202ENST00000585333 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
TRIM47-202ENST00000585333 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
TRIM47-202ENST00000585333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
TRIM47-202ENST00000585333 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
TRIM47-202ENST00000585333 ATP10BO94823 1461 aa20.1■□□□□ 0.81
TRIM47-202ENST00000585333 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
TRIM47-202ENST00000585333 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.81
TRIM47-202ENST00000585333 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
TRIM47-202ENST00000585333 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
TRIM47-202ENST00000585333 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
TRIM47-202ENST00000585333 LRRC9Q6ZRR7 1453 aa20.04■□□□□ 0.8
TRIM47-202ENST00000585333 TROQ12816 1431 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-202ENST00000585333 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
TRIM47-202ENST00000585333 MAPKBP1O60336 1514 aa20.02■□□□□ 0.79
TRIM47-202ENST00000585333 ARID3CA6NKF2 412 aa20■□□□□ 0.79
TRIM47-202ENST00000585333 WDR7Q9Y4E6 1490 aa19.99■□□□□ 0.79
TRIM47-202ENST00000585333 KIF14Q15058 1648 aa19.97■□□□□ 0.79
TRIM47-202ENST00000585333 SUPT6HQ7KZ85 1726 aaKnown RBP19.96■□□□□ 0.79
TRIM47-202ENST00000585333 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
TRIM47-202ENST00000585333 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
TRIM47-202ENST00000585333 MAGI3Q5TCQ9 1506 aa19.9■□□□□ 0.78
TRIM47-202ENST00000585333 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
TRIM47-202ENST00000585333 CCNB3Q8WWL7 1395 aa19.86■□□□□ 0.77
TRIM47-202ENST00000585333 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-202ENST00000585333 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
TRIM47-202ENST00000585333 ITSN2Q9NZM3 1697 aa19.84■□□□□ 0.77
TRIM47-202ENST00000585333 GLI2P10070 1586 aa19.83■□□□□ 0.76
TRIM47-202ENST00000585333 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
TRIM47-202ENST00000585333 ABCA9Q8IUA7 1624 aa19.82■□□□□ 0.76
TRIM47-202ENST00000585333 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
TRIM47-202ENST00000585333 MIA2Q96PC5 1412 aa19.81■□□□□ 0.76
TRIM47-202ENST00000585333 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
TRIM47-202ENST00000585333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.8■□□□□ 0.76
TRIM47-202ENST00000585333 MYO5CQ9NQX4 1742 aa19.77■□□□□ 0.76
TRIM47-202ENST00000585333 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
TRIM47-202ENST00000585333 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
TRIM47-202ENST00000585333 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
TRIM47-202ENST00000585333 PHLDB1Q86UU1 1377 aa19.75■□□□□ 0.75
TRIM47-202ENST00000585333 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
TRIM47-202ENST00000585333 GPATCH8Q9UKJ3 1502 aaKnown RBP19.75■□□□□ 0.75
TRIM47-202ENST00000585333 PLCH2O75038 1416 aa19.75■□□□□ 0.75
TRIM47-202ENST00000585333 PREX2Q70Z35 1606 aa19.74■□□□□ 0.75
TRIM47-202ENST00000585333 CD109Q6YHK3 1445 aa19.74■□□□□ 0.75
TRIM47-202ENST00000585333 FGD6Q6ZV73 1430 aa19.74■□□□□ 0.75
TRIM47-202ENST00000585333 CFAP74Q9C0B2 1584 aa19.74■□□□□ 0.75
TRIM47-202ENST00000585333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.73■□□□□ 0.75
TRIM47-202ENST00000585333 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms