RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TNIKQ9UKE5 1360 aa14.88□□□□□ -0.03
CASC3-209ENST00000583902 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
CASC3-209ENST00000583902 SNAPC4Q5SXM2 1469 aa14.85□□□□□ -0.03
CASC3-209ENST00000583902 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
CASC3-209ENST00000583902 CHMP7Q8WUX9 453 aaPredicted RBP14.8□□□□□ -0.04
CASC3-209ENST00000583902 GRIN2AQ12879 1464 aa14.8□□□□□ -0.04
CASC3-209ENST00000583902 CTTNBP2Q8WZ74 1663 aa14.78□□□□□ -0.04
CASC3-209ENST00000583902 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
CASC3-209ENST00000583902 NUP160Q12769 1436 aa14.75□□□□□ -0.05
CASC3-209ENST00000583902 KIAA0586Q9BVV6 1533 aa14.74□□□□□ -0.05
CASC3-209ENST00000583902 CHD1O14646 1710 aa14.7□□□□□ -0.06
CASC3-209ENST00000583902 IQGAP2Q13576 1575 aa14.7□□□□□ -0.06
CASC3-209ENST00000583902 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
CASC3-209ENST00000583902 EFCAB5A4FU69 1503 aa14.7□□□□□ -0.06
CASC3-209ENST00000583902 FBLN2P98095 1184 aa14.67□□□□□ -0.06
CASC3-209ENST00000583902 CLIP1P30622 1438 aa14.66□□□□□ -0.06
CASC3-209ENST00000583902 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
CASC3-209ENST00000583902 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
CASC3-209ENST00000583902 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
CASC3-209ENST00000583902 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
CASC3-209ENST00000583902 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
CASC3-209ENST00000583902 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
CASC3-209ENST00000583902 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
CASC3-209ENST00000583902 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
CASC3-209ENST00000583902 CARMIL2Q6F5E8 1435 aa14.59□□□□□ -0.07
CASC3-209ENST00000583902 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
CASC3-209ENST00000583902 SHROOM2Q13796 1616 aa14.58□□□□□ -0.08
CASC3-209ENST00000583902 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
CASC3-209ENST00000583902 JPH4Q96JJ6 628 aa14.57□□□□□ -0.08
CASC3-209ENST00000583902 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
CASC3-209ENST00000583902 FMN1Q68DA7 1419 aa14.56□□□□□ -0.08
CASC3-209ENST00000583902 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
CASC3-209ENST00000583902 KIAA0556O60303 1618 aa14.52□□□□□ -0.08
CASC3-209ENST00000583902 DISP1Q96F81 1524 aa14.51□□□□□ -0.09
CASC3-209ENST00000583902 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
CASC3-209ENST00000583902 PRG4Q92954 1404 aaPredicted RBP14.48□□□□□ -0.09
CASC3-209ENST00000583902 MAP3K1Q13233 1512 aa14.46□□□□□ -0.1
CASC3-209ENST00000583902 FYCO1Q9BQS8 1478 aa14.45□□□□□ -0.1
CASC3-209ENST00000583902 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
CASC3-209ENST00000583902 CASKIN1Q8WXD9 1431 aa14.45□□□□□ -0.1
CASC3-209ENST00000583902 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
CASC3-209ENST00000583902 APLP2Q06481 763 aa14.44□□□□□ -0.1
CASC3-209ENST00000583902 PTPRGP23470 1445 aa14.4□□□□□ -0.1
CASC3-209ENST00000583902 CCDC18Q5T9S5 1454 aa14.39□□□□□ -0.11
CASC3-209ENST00000583902 HECW1Q76N89 1606 aa14.39□□□□□ -0.11
CASC3-209ENST00000583902 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
CASC3-209ENST00000583902 RAPGEF6Q8TEU7 1601 aa14.37□□□□□ -0.11
CASC3-209ENST00000583902 ABCA8O94911 1581 aa14.35□□□□□ -0.11
CASC3-209ENST00000583902 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
CASC3-209ENST00000583902 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
CASC3-209ENST00000583902 UHRF1BP1LA0JNW5 1464 aa14.34□□□□□ -0.11
CASC3-209ENST00000583902 UACAQ9BZF9 1416 aa14.33□□□□□ -0.11
CASC3-209ENST00000583902 CDK11AQ9UQ88 783 aaPredicted RBP14.32□□□□□ -0.12
CASC3-209ENST00000583902 CFAP43Q8NDM7 1665 aa14.32□□□□□ -0.12
CASC3-209ENST00000583902 TIAM1Q13009 1591 aa14.31□□□□□ -0.12
CASC3-209ENST00000583902 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
CASC3-209ENST00000583902 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
CASC3-209ENST00000583902 EPRSP07814 1512 aaKnown RBP14.3□□□□□ -0.12
CASC3-209ENST00000583902 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
CASC3-209ENST00000583902 NUP153P49790 1475 aaKnown RBP14.28□□□□□ -0.12
CASC3-209ENST00000583902 PLB1Q6P1J6 1458 aa14.27□□□□□ -0.12
CASC3-209ENST00000583902 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
CASC3-209ENST00000583902 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
CASC3-209ENST00000583902 KDM5BQ9UGL1 1544 aa14.24□□□□□ -0.13
CASC3-209ENST00000583902 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
CASC3-209ENST00000583902 EHBP1L1Q8N3D4 1523 aa14.23□□□□□ -0.13
CASC3-209ENST00000583902 LRRIQ1Q96JM4 1722 aa14.23□□□□□ -0.13
CASC3-209ENST00000583902 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
CASC3-209ENST00000583902 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
CASC3-209ENST00000583902 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
CASC3-209ENST00000583902 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
CASC3-209ENST00000583902 ATP10BO94823 1461 aa14.21□□□□□ -0.13
CASC3-209ENST00000583902 PLEKHD1A6NEE1 506 aa14.2□□□□□ -0.14
CASC3-209ENST00000583902 SUPT6HQ7KZ85 1726 aaKnown RBP14.19□□□□□ -0.14
CASC3-209ENST00000583902 TROQ12816 1431 aaPredicted RBP14.18□□□□□ -0.14
CASC3-209ENST00000583902 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
CASC3-209ENST00000583902 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
CASC3-209ENST00000583902 ADCY10Q96PN6 1610 aa14.18□□□□□ -0.14
CASC3-209ENST00000583902 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
CASC3-209ENST00000583902 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
CASC3-209ENST00000583902 CDK13Q14004 1512 aaKnown RBP14.16□□□□□ -0.14
CASC3-209ENST00000583902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
CASC3-209ENST00000583902 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
CASC3-209ENST00000583902 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
CASC3-209ENST00000583902 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
CASC3-209ENST00000583902 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
CASC3-209ENST00000583902 KIF14Q15058 1648 aa14.12□□□□□ -0.15
CASC3-209ENST00000583902 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
CASC3-209ENST00000583902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.1□□□□□ -0.15
CASC3-209ENST00000583902 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
CASC3-209ENST00000583902 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
CASC3-209ENST00000583902 WDR7Q9Y4E6 1490 aa14.09□□□□□ -0.15
CASC3-209ENST00000583902 MAGI3Q5TCQ9 1506 aa14.09□□□□□ -0.15
CASC3-209ENST00000583902 MIA2Q96PC5 1412 aa14.08□□□□□ -0.15
CASC3-209ENST00000583902 ITSN2Q9NZM3 1697 aa14.08□□□□□ -0.16
CASC3-209ENST00000583902 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
CASC3-209ENST00000583902 MYOM3Q5VTT5 1437 aa14.07□□□□□ -0.16
CASC3-209ENST00000583902 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
CASC3-209ENST00000583902 ASXL2Q76L83 1435 aa14.05□□□□□ -0.16
CASC3-209ENST00000583902 ARAP3Q8WWN8 1544 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms