RNA–Protein interactions for RNA: ENST00000583389.5

EIF4A1-228, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-228ENST00000583389 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
EIF4A1-228ENST00000583389 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
EIF4A1-228ENST00000583389 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
EIF4A1-228ENST00000583389 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
EIF4A1-228ENST00000583389 ARHGEF11O15085 1522 aa23.9■■□□□ 1.42
EIF4A1-228ENST00000583389 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
EIF4A1-228ENST00000583389 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
EIF4A1-228ENST00000583389 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
EIF4A1-228ENST00000583389 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
EIF4A1-228ENST00000583389 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
EIF4A1-228ENST00000583389 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
EIF4A1-228ENST00000583389 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
EIF4A1-228ENST00000583389 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
EIF4A1-228ENST00000583389 ERCC6L2Q5T890 1561 aa23.75■■□□□ 1.39
EIF4A1-228ENST00000583389 KIAA0556O60303 1618 aa23.73■■□□□ 1.39
EIF4A1-228ENST00000583389 DISP1Q96F81 1524 aa23.72■■□□□ 1.39
EIF4A1-228ENST00000583389 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
EIF4A1-228ENST00000583389 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
EIF4A1-228ENST00000583389 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
EIF4A1-228ENST00000583389 EFCAB5A4FU69 1503 aa23.68■■□□□ 1.38
EIF4A1-228ENST00000583389 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
EIF4A1-228ENST00000583389 PTPRGP23470 1445 aa23.58■■□□□ 1.36
EIF4A1-228ENST00000583389 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
EIF4A1-228ENST00000583389 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
EIF4A1-228ENST00000583389 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
EIF4A1-228ENST00000583389 LOC105371045A0A1W2PR82 267 aa23.49■■□□□ 1.35
EIF4A1-228ENST00000583389 CLIP1P30622 1438 aa23.48■■□□□ 1.35
EIF4A1-228ENST00000583389 FHOD3Q2V2M9 1422 aa23.47■■□□□ 1.35
EIF4A1-228ENST00000583389 UHRF1BP1LA0JNW5 1464 aa23.45■■□□□ 1.34
EIF4A1-228ENST00000583389 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
EIF4A1-228ENST00000583389 UACAQ9BZF9 1416 aa23.45■■□□□ 1.34
EIF4A1-228ENST00000583389 P3H3Q8IVL6 736 aa23.45■■□□□ 1.34
EIF4A1-228ENST00000583389 ADCY10Q96PN6 1610 aa23.44■■□□□ 1.34
EIF4A1-228ENST00000583389 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
EIF4A1-228ENST00000583389 ABCA8O94911 1581 aa23.43■■□□□ 1.34
EIF4A1-228ENST00000583389 TTBK1Q5TCY1 1321 aaPredicted RBP23.42■■□□□ 1.34
EIF4A1-228ENST00000583389 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
EIF4A1-228ENST00000583389 RAPGEF6Q8TEU7 1601 aa23.39■■□□□ 1.33
EIF4A1-228ENST00000583389 PLB1Q6P1J6 1458 aa23.38■■□□□ 1.33
EIF4A1-228ENST00000583389 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
EIF4A1-228ENST00000583389 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
EIF4A1-228ENST00000583389 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
EIF4A1-228ENST00000583389 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
EIF4A1-228ENST00000583389 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
EIF4A1-228ENST00000583389 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
EIF4A1-228ENST00000583389 CASKIN1Q8WXD9 1431 aa23.25■■□□□ 1.31
EIF4A1-228ENST00000583389 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
EIF4A1-228ENST00000583389 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
EIF4A1-228ENST00000583389 ATP10BO94823 1461 aa23.19■■□□□ 1.3
EIF4A1-228ENST00000583389 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
EIF4A1-228ENST00000583389 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
EIF4A1-228ENST00000583389 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
EIF4A1-228ENST00000583389 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
EIF4A1-228ENST00000583389 ASXL2Q76L83 1435 aa23.15■■□□□ 1.3
EIF4A1-228ENST00000583389 WDR7Q9Y4E6 1490 aa23.12■■□□□ 1.29
EIF4A1-228ENST00000583389 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
EIF4A1-228ENST00000583389 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
EIF4A1-228ENST00000583389 ABCC10Q5T3U5 1492 aa23.09■■□□□ 1.29
EIF4A1-228ENST00000583389 DIP2BQ9P265 1576 aa23.09■■□□□ 1.29
EIF4A1-228ENST00000583389 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.29
EIF4A1-228ENST00000583389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
EIF4A1-228ENST00000583389 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
EIF4A1-228ENST00000583389 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
EIF4A1-228ENST00000583389 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
EIF4A1-228ENST00000583389 GLI2P10070 1586 aa23.05■■□□□ 1.28
EIF4A1-228ENST00000583389 PLEKHD1A6NEE1 506 aa23.03■■□□□ 1.28
EIF4A1-228ENST00000583389 CFAP43Q8NDM7 1665 aa23.03■■□□□ 1.28
EIF4A1-228ENST00000583389 MAP3K1Q13233 1512 aa22.99■■□□□ 1.27
EIF4A1-228ENST00000583389 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
EIF4A1-228ENST00000583389 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
EIF4A1-228ENST00000583389 TROQ12816 1431 aaPredicted RBP22.97■■□□□ 1.27
EIF4A1-228ENST00000583389 FAM69CQ0P6D2 419 aa22.95■■□□□ 1.26
EIF4A1-228ENST00000583389 ABCA9Q8IUA7 1624 aa22.95■■□□□ 1.26
EIF4A1-228ENST00000583389 KIF14Q15058 1648 aa22.94■■□□□ 1.26
EIF4A1-228ENST00000583389 MAP3K4Q9Y6R4 1608 aa22.94■■□□□ 1.26
EIF4A1-228ENST00000583389 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
EIF4A1-228ENST00000583389 EHBP1L1Q8N3D4 1523 aa22.92■■□□□ 1.26
EIF4A1-228ENST00000583389 MAGI3Q5TCQ9 1506 aa22.91■■□□□ 1.26
EIF4A1-228ENST00000583389 APLP2Q06481 763 aa22.89■■□□□ 1.25
EIF4A1-228ENST00000583389 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
EIF4A1-228ENST00000583389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.255e-6■□□□□ 10.5
EIF4A1-228ENST00000583389 TSPOAP1O95153 1857 aa22.87■■□□□ 1.25
EIF4A1-228ENST00000583389 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
EIF4A1-228ENST00000583389 TTC37Q6PGP7 1564 aa22.84■■□□□ 1.25
EIF4A1-228ENST00000583389 CD109Q6YHK3 1445 aa22.84■■□□□ 1.25
EIF4A1-228ENST00000583389 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
EIF4A1-228ENST00000583389 SUPT6HQ7KZ85 1726 aaKnown RBP22.83■■□□□ 1.25
EIF4A1-228ENST00000583389 MYO5CQ9NQX4 1742 aa22.83■■□□□ 1.25
EIF4A1-228ENST00000583389 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
EIF4A1-228ENST00000583389 ARAP3Q8WWN8 1544 aa22.8■■□□□ 1.24
EIF4A1-228ENST00000583389 CFAP74Q9C0B2 1584 aa22.77■■□□□ 1.24
EIF4A1-228ENST00000583389 PREX2Q70Z35 1606 aa22.75■■□□□ 1.23
EIF4A1-228ENST00000583389 CDC42BPAQ5VT25 1732 aa22.75■■□□□ 1.23
EIF4A1-228ENST00000583389 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
EIF4A1-228ENST00000583389 PLCH2O75038 1416 aa22.74■■□□□ 1.23
EIF4A1-228ENST00000583389 NCOA2Q15596 1464 aa22.73■■□□□ 1.23
EIF4A1-228ENST00000583389 CDC42BPBQ9Y5S2 1711 aa22.72■■□□□ 1.23
EIF4A1-228ENST00000583389 PHLDB1Q86UU1 1377 aa22.72■■□□□ 1.23
EIF4A1-228ENST00000583389 NEO1Q92859 1461 aa22.72■■□□□ 1.23
EIF4A1-228ENST00000583389 KANK4Q5T7N3 995 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms