RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
NDEL1-216ENST00000583066 ZBTB22O15209 634 aa11.8□□□□□ -0.52
NDEL1-216ENST00000583066 TOP2AP11388 1531 aaKnown RBP11.79□□□□□ -0.52
NDEL1-216ENST00000583066 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
NDEL1-216ENST00000583066 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
NDEL1-216ENST00000583066 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.52
NDEL1-216ENST00000583066 TDRD9Q8NDG6 1382 aaKnown RBP11.76□□□□□ -0.53
NDEL1-216ENST00000583066 ABCC8Q09428 1581 aa11.75□□□□□ -0.53
NDEL1-216ENST00000583066 HECW2Q9P2P5 1572 aa11.72□□□□□ -0.53
NDEL1-216ENST00000583066 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-216ENST00000583066 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
NDEL1-216ENST00000583066 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
NDEL1-216ENST00000583066 KDM6BO15054 1643 aa11.68□□□□□ -0.54
NDEL1-216ENST00000583066 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
NDEL1-216ENST00000583066 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
NDEL1-216ENST00000583066 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-216ENST00000583066 WDR97A6NE52 1622 aa11.65□□□□□ -0.54
NDEL1-216ENST00000583066 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.54
NDEL1-216ENST00000583066 SOGA1O94964 1423 aa11.65□□□□□ -0.54
NDEL1-216ENST00000583066 CEP170Q5SW79 1584 aa11.65□□□□□ -0.54
NDEL1-216ENST00000583066 PBRM1Q86U86 1689 aa11.65□□□□□ -0.55
NDEL1-216ENST00000583066 GRIN2BQ13224 1484 aa11.63□□□□□ -0.55
NDEL1-216ENST00000583066 ADGRL1O94910 1474 aa11.63□□□□□ -0.55
NDEL1-216ENST00000583066 DIP2BQ9P265 1576 aa11.62□□□□□ -0.55
NDEL1-216ENST00000583066 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
NDEL1-216ENST00000583066 ABCC10Q5T3U5 1492 aa11.61□□□□□ -0.55
NDEL1-216ENST00000583066 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
NDEL1-216ENST00000583066 FAM69CQ0P6D2 419 aa11.6□□□□□ -0.55
NDEL1-216ENST00000583066 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
NDEL1-216ENST00000583066 SHROOM2Q13796 1616 aa11.58□□□□□ -0.56
NDEL1-216ENST00000583066 LMTK3Q96Q04 1460 aa11.57□□□□□ -0.56
NDEL1-216ENST00000583066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
NDEL1-216ENST00000583066 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
NDEL1-216ENST00000583066 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-216ENST00000583066 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
NDEL1-216ENST00000583066 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
NDEL1-216ENST00000583066 NUP160Q12769 1436 aa11.52□□□□□ -0.57
NDEL1-216ENST00000583066 CUX1P39880 1505 aa11.51□□□□□ -0.57
NDEL1-216ENST00000583066 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
NDEL1-216ENST00000583066 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
NDEL1-216ENST00000583066 ILDR2Q71H61 639 aa11.49□□□□□ -0.57
NDEL1-216ENST00000583066 ADCY10Q96PN6 1610 aa11.49□□□□□ -0.57
NDEL1-216ENST00000583066 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
NDEL1-216ENST00000583066 PPRC1Q5VV67 1664 aaKnown RBP11.46□□□□□ -0.57
NDEL1-216ENST00000583066 SOCS7O14512 581 aa11.45□□□□□ -0.58
NDEL1-216ENST00000583066 PRG4Q92954 1404 aaPredicted RBP11.44□□□□□ -0.58
NDEL1-216ENST00000583066 APLP2Q06481 763 aa11.44□□□□□ -0.58
NDEL1-216ENST00000583066 CAPN15O75808 1086 aa11.42□□□□□ -0.58
NDEL1-216ENST00000583066 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-216ENST00000583066 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
NDEL1-216ENST00000583066 COL17A1Q9UMD9 1497 aaPredicted RBP11.4□□□□□ -0.58
NDEL1-216ENST00000583066 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
NDEL1-216ENST00000583066 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
NDEL1-216ENST00000583066 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
NDEL1-216ENST00000583066 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
NDEL1-216ENST00000583066 ZNF219Q9P2Y4 722 aaPredicted RBP11.33□□□□□ -0.6
NDEL1-216ENST00000583066 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
NDEL1-216ENST00000583066 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
NDEL1-216ENST00000583066 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
NDEL1-216ENST00000583066 DSG3P32926 999 aa11.3□□□□□ -0.6
NDEL1-216ENST00000583066 GLI2P10070 1586 aa11.29□□□□□ -0.6
NDEL1-216ENST00000583066 SPATA31D1Q6ZQQ2 1576 aa11.27□□□□□ -0.61
NDEL1-216ENST00000583066 KIF21BO75037 1637 aa11.26□□□□□ -0.61
NDEL1-216ENST00000583066 MAP3K4Q9Y6R4 1608 aa11.26□□□□□ -0.61
NDEL1-216ENST00000583066 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
NDEL1-216ENST00000583066 CUL7Q14999 1698 aa11.24□□□□□ -0.61
NDEL1-216ENST00000583066 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
NDEL1-216ENST00000583066 PCF11O94913 1555 aaKnown RBP11.21□□□□□ -0.61
NDEL1-216ENST00000583066 ABCB7O75027 752 aa11.21□□□□□ -0.61
NDEL1-216ENST00000583066 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
NDEL1-216ENST00000583066 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
NDEL1-216ENST00000583066 PTPRMP28827 1452 aa11.19□□□□□ -0.62
NDEL1-216ENST00000583066 EPRSP07814 1512 aaKnown RBP11.18□□□□□ -0.62
NDEL1-216ENST00000583066 TEX14Q8IWB6 1497 aa11.18□□□□□ -0.62
NDEL1-216ENST00000583066 ADAMTSL3P82987 1691 aa11.17□□□□□ -0.62
NDEL1-216ENST00000583066 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
NDEL1-216ENST00000583066 POLA2Q14181 598 aa11.16□□□□□ -0.62
NDEL1-216ENST00000583066 CERKQ8TCT0 537 aa11.15□□□□□ -0.62
NDEL1-216ENST00000583066 TTBK1Q5TCY1 1321 aaPredicted RBP11.14□□□□□ -0.63
NDEL1-216ENST00000583066 PTPRGP23470 1445 aa11.13□□□□□ -0.63
NDEL1-216ENST00000583066 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
NDEL1-216ENST00000583066 MADDQ8WXG6 1647 aa11.11□□□□□ -0.63
NDEL1-216ENST00000583066 SUPT5HO00267 1087 aaKnown RBP11.11□□□□□ -0.63
NDEL1-216ENST00000583066 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
NDEL1-216ENST00000583066 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
NDEL1-216ENST00000583066 HSPA2P54652 639 aa11.1□□□□□ -0.63
NDEL1-216ENST00000583066 UHRF1BP1LA0JNW5 1464 aa11.08□□□□□ -0.64
NDEL1-216ENST00000583066 BCORL1Q5H9F3 1711 aa11.07□□□□□ -0.64
NDEL1-216ENST00000583066 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
NDEL1-216ENST00000583066 RIMS1Q86UR5 1692 aaKnown RBP11.05□□□□□ -0.64
NDEL1-216ENST00000583066 TNIKQ9UKE5 1360 aa11.04□□□□□ -0.64
NDEL1-216ENST00000583066 UACAQ9BZF9 1416 aa11.03□□□□□ -0.64
NDEL1-216ENST00000583066 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
NDEL1-216ENST00000583066 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
NDEL1-216ENST00000583066 WDR7Q9Y4E6 1490 aa11.01□□□□□ -0.65
NDEL1-216ENST00000583066 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
NDEL1-216ENST00000583066 CD109Q6YHK3 1445 aa11□□□□□ -0.65
NDEL1-216ENST00000583066 CARMIL2Q6F5E8 1435 aa10.97□□□□□ -0.65
NDEL1-216ENST00000583066 ARAP3Q8WWN8 1544 aa10.97□□□□□ -0.65
NDEL1-216ENST00000583066 DISP1Q96F81 1524 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms