RNA–Protein interactions for RNA: ENST00000582097.5

KPNB1-211, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 2,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-211ENST00000582097 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
KPNB1-211ENST00000582097 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
KPNB1-211ENST00000582097 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
KPNB1-211ENST00000582097 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
KPNB1-211ENST00000582097 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
KPNB1-211ENST00000582097 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
KPNB1-211ENST00000582097 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
KPNB1-211ENST00000582097 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
KPNB1-211ENST00000582097 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
KPNB1-211ENST00000582097 MYT1Q01538 1121 aa13.27□□□□□ -0.28
KPNB1-211ENST00000582097 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
KPNB1-211ENST00000582097 FHOD3Q2V2M9 1422 aa13.25□□□□□ -0.29
KPNB1-211ENST00000582097 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
KPNB1-211ENST00000582097 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
KPNB1-211ENST00000582097 APLP2Q06481 763 aa13.23□□□□□ -0.29
KPNB1-211ENST00000582097 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
KPNB1-211ENST00000582097 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
KPNB1-211ENST00000582097 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
KPNB1-211ENST00000582097 NUP160Q12769 1436 aa13.21□□□□□ -0.29
KPNB1-211ENST00000582097 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
KPNB1-211ENST00000582097 ATP1B4Q9UN42 357 aaPredicted RBP13.19□□□□□ -0.3
KPNB1-211ENST00000582097 TRIM26Q12899 539 aaPredicted RBP13.18□□□□□ -0.3
KPNB1-211ENST00000582097 CHD1O14646 1710 aa13.17□□□□□ -0.3
KPNB1-211ENST00000582097 UGGT2Q9NYU1 1516 aa13.17□□□□□ -0.3
KPNB1-211ENST00000582097 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
KPNB1-211ENST00000582097 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
KPNB1-211ENST00000582097 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
KPNB1-211ENST00000582097 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
KPNB1-211ENST00000582097 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
KPNB1-211ENST00000582097 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
KPNB1-211ENST00000582097 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
KPNB1-211ENST00000582097 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
KPNB1-211ENST00000582097 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
KPNB1-211ENST00000582097 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
KPNB1-211ENST00000582097 DAXXQ9UER7 740 aaPredicted RBP13.07□□□□□ -0.32
KPNB1-211ENST00000582097 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
KPNB1-211ENST00000582097 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
KPNB1-211ENST00000582097 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
KPNB1-211ENST00000582097 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.32
KPNB1-211ENST00000582097 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
KPNB1-211ENST00000582097 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
KPNB1-211ENST00000582097 SHROOM2Q13796 1616 aa13□□□□□ -0.33
KPNB1-211ENST00000582097 HECW1Q76N89 1606 aa13□□□□□ -0.33
KPNB1-211ENST00000582097 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
KPNB1-211ENST00000582097 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
KPNB1-211ENST00000582097 PTPRGP23470 1445 aa12.99□□□□□ -0.33
KPNB1-211ENST00000582097 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
KPNB1-211ENST00000582097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
KPNB1-211ENST00000582097 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
KPNB1-211ENST00000582097 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
KPNB1-211ENST00000582097 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
KPNB1-211ENST00000582097 EPRSP07814 1512 aaKnown RBP12.97□□□□□ -0.33
KPNB1-211ENST00000582097 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
KPNB1-211ENST00000582097 RAPGEF6Q8TEU7 1601 aa12.97□□□□□ -0.33
KPNB1-211ENST00000582097 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
KPNB1-211ENST00000582097 CDK13Q14004 1512 aaKnown RBP12.97□□□□□ -0.33
KPNB1-211ENST00000582097 NUP153P49790 1475 aaKnown RBP12.96□□□□□ -0.34
KPNB1-211ENST00000582097 PHLDB1Q86UU1 1377 aa12.92□□□□□ -0.34
KPNB1-211ENST00000582097 ABCA8O94911 1581 aa12.92□□□□□ -0.34
KPNB1-211ENST00000582097 MAGI3Q5TCQ9 1506 aa12.91□□□□□ -0.34
KPNB1-211ENST00000582097 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
KPNB1-211ENST00000582097 EHBP1L1Q8N3D4 1523 aa12.9□□□□□ -0.34
KPNB1-211ENST00000582097 UACAQ9BZF9 1416 aa12.89□□□□□ -0.35
KPNB1-211ENST00000582097 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
KPNB1-211ENST00000582097 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
KPNB1-211ENST00000582097 ATP10BO94823 1461 aa12.87□□□□□ -0.35
KPNB1-211ENST00000582097 NCOA2Q15596 1464 aa12.87□□□□□ -0.35
KPNB1-211ENST00000582097 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
KPNB1-211ENST00000582097 SUPT6HQ7KZ85 1726 aaKnown RBP12.84□□□□□ -0.35
KPNB1-211ENST00000582097 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
KPNB1-211ENST00000582097 ITGAEP38570 1179 aa12.84□□□□□ -0.35
KPNB1-211ENST00000582097 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
KPNB1-211ENST00000582097 TROQ12816 1431 aaPredicted RBP12.83□□□□□ -0.36
KPNB1-211ENST00000582097 MYOM3Q5VTT5 1437 aa12.81□□□□□ -0.36
KPNB1-211ENST00000582097 FGD6Q6ZV73 1430 aa12.81□□□□□ -0.36
KPNB1-211ENST00000582097 ARHGEF11O15085 1522 aa12.81□□□□□ -0.36
KPNB1-211ENST00000582097 UHRF1BP1LA0JNW5 1464 aa12.79□□□□□ -0.36
KPNB1-211ENST00000582097 KIF14Q15058 1648 aa12.76□□□□□ -0.37
KPNB1-211ENST00000582097 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
KPNB1-211ENST00000582097 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
KPNB1-211ENST00000582097 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
KPNB1-211ENST00000582097 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
KPNB1-211ENST00000582097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
KPNB1-211ENST00000582097 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
KPNB1-211ENST00000582097 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
KPNB1-211ENST00000582097 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
KPNB1-211ENST00000582097 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
KPNB1-211ENST00000582097 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
KPNB1-211ENST00000582097 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
KPNB1-211ENST00000582097 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
KPNB1-211ENST00000582097 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
KPNB1-211ENST00000582097 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.37
KPNB1-211ENST00000582097 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.38
KPNB1-211ENST00000582097 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.38
KPNB1-211ENST00000582097 ABCC10Q5T3U5 1492 aa12.7□□□□□ -0.38
KPNB1-211ENST00000582097 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
KPNB1-211ENST00000582097 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
KPNB1-211ENST00000582097 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
KPNB1-211ENST00000582097 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
KPNB1-211ENST00000582097 PTPRKQ15262 1439 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms