RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.3
TOP3A-211ENST00000581536 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.3
TOP3A-211ENST00000581536 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.3
TOP3A-211ENST00000581536 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
TOP3A-211ENST00000581536 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-211ENST00000581536 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
TOP3A-211ENST00000581536 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
TOP3A-211ENST00000581536 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
TOP3A-211ENST00000581536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.296e-6■□□□□ 8.3
TOP3A-211ENST00000581536 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
TOP3A-211ENST00000581536 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
TOP3A-211ENST00000581536 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
TOP3A-211ENST00000581536 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
TOP3A-211ENST00000581536 ARAP1Q96P48 1450 aa16.77■□□□□ 0.28
TOP3A-211ENST00000581536 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
TOP3A-211ENST00000581536 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
TOP3A-211ENST00000581536 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
TOP3A-211ENST00000581536 IGF1RP08069 1367 aa16.72■□□□□ 0.27
TOP3A-211ENST00000581536 NUP160Q12769 1436 aa16.69■□□□□ 0.26
TOP3A-211ENST00000581536 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
TOP3A-211ENST00000581536 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
TOP3A-211ENST00000581536 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
TOP3A-211ENST00000581536 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
TOP3A-211ENST00000581536 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
TOP3A-211ENST00000581536 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
TOP3A-211ENST00000581536 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
TOP3A-211ENST00000581536 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
TOP3A-211ENST00000581536 ZBTB22O15209 634 aa16.59■□□□□ 0.25
TOP3A-211ENST00000581536 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
TOP3A-211ENST00000581536 CUL7Q14999 1698 aa16.58■□□□□ 0.24
TOP3A-211ENST00000581536 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
TOP3A-211ENST00000581536 PRG4Q92954 1404 aaPredicted RBP16.55■□□□□ 0.24
TOP3A-211ENST00000581536 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
TOP3A-211ENST00000581536 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
TOP3A-211ENST00000581536 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
TOP3A-211ENST00000581536 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
TOP3A-211ENST00000581536 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
TOP3A-211ENST00000581536 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-211ENST00000581536 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
TOP3A-211ENST00000581536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
TOP3A-211ENST00000581536 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
TOP3A-211ENST00000581536 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
TOP3A-211ENST00000581536 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
TOP3A-211ENST00000581536 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
TOP3A-211ENST00000581536 PTPRGP23470 1445 aa16.33■□□□□ 0.2
TOP3A-211ENST00000581536 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
TOP3A-211ENST00000581536 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
TOP3A-211ENST00000581536 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
TOP3A-211ENST00000581536 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
TOP3A-211ENST00000581536 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
TOP3A-211ENST00000581536 CTTNBP2Q8WZ74 1663 aa16.3■□□□□ 0.2
TOP3A-211ENST00000581536 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
TOP3A-211ENST00000581536 KIF13AQ9H1H9 1805 aa16.3■□□□□ 0.2
TOP3A-211ENST00000581536 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
TOP3A-211ENST00000581536 APLP2Q06481 763 aa16.27■□□□□ 0.2
TOP3A-211ENST00000581536 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
TOP3A-211ENST00000581536 FAM69CQ0P6D2 419 aa16.23■□□□□ 0.19
TOP3A-211ENST00000581536 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
TOP3A-211ENST00000581536 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
TOP3A-211ENST00000581536 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
TOP3A-211ENST00000581536 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-211ENST00000581536 MAPKBP1O60336 1514 aa16.18■□□□□ 0.18
TOP3A-211ENST00000581536 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
TOP3A-211ENST00000581536 EEA1Q15075 1411 aa16.18■□□□□ 0.18
TOP3A-211ENST00000581536 ABCC10Q5T3U5 1492 aa16.17■□□□□ 0.18
TOP3A-211ENST00000581536 ABCC2Q92887 1545 aa16.16■□□□□ 0.18
TOP3A-211ENST00000581536 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
TOP3A-211ENST00000581536 UHRF1BP1LA0JNW5 1464 aa16.16■□□□□ 0.18
TOP3A-211ENST00000581536 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
TOP3A-211ENST00000581536 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
TOP3A-211ENST00000581536 PLB1Q6P1J6 1458 aa16.14■□□□□ 0.17
TOP3A-211ENST00000581536 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
TOP3A-211ENST00000581536 ZCCHC11Q5TAX3 1644 aaKnown RBP16.11■□□□□ 0.17
TOP3A-211ENST00000581536 KDM5BQ9UGL1 1544 aa16.1■□□□□ 0.17
TOP3A-211ENST00000581536 ARID3CA6NKF2 412 aa16.08■□□□□ 0.16
TOP3A-211ENST00000581536 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-211ENST00000581536 ABCA8O94911 1581 aa16.08■□□□□ 0.16
TOP3A-211ENST00000581536 KIF21BO75037 1637 aa16.08■□□□□ 0.16
TOP3A-211ENST00000581536 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
TOP3A-211ENST00000581536 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
TOP3A-211ENST00000581536 CAPN15O75808 1086 aa16.05■□□□□ 0.16
TOP3A-211ENST00000581536 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
TOP3A-211ENST00000581536 EPRSP07814 1512 aaKnown RBP16.01■□□□□ 0.15
TOP3A-211ENST00000581536 PPRC1Q5VV67 1664 aaKnown RBP16.01■□□□□ 0.15
TOP3A-211ENST00000581536 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
TOP3A-211ENST00000581536 GLI2P10070 1586 aa16■□□□□ 0.15
TOP3A-211ENST00000581536 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
TOP3A-211ENST00000581536 ATP10BO94823 1461 aa15.99■□□□□ 0.15
TOP3A-211ENST00000581536 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
TOP3A-211ENST00000581536 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
TOP3A-211ENST00000581536 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
TOP3A-211ENST00000581536 MAP3K4Q9Y6R4 1608 aa15.96■□□□□ 0.15
TOP3A-211ENST00000581536 KDM6BO15054 1643 aa15.94■□□□□ 0.14
TOP3A-211ENST00000581536 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
TOP3A-211ENST00000581536 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
TOP3A-211ENST00000581536 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
TOP3A-211ENST00000581536 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
TOP3A-211ENST00000581536 CD109Q6YHK3 1445 aa15.88■□□□□ 0.13
TOP3A-211ENST00000581536 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-211ENST00000581536 CFAP43Q8NDM7 1665 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms