RNA–Protein interactions for RNA: ENST00000580396.1

CPD-204, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 2,733 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-204ENST00000580396 CLIP1P30622 1438 aa13.81□□□□□ -0.2
CPD-204ENST00000580396 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
CPD-204ENST00000580396 NEUROD1Q13562 356 aa13.8□□□□□ -0.2
CPD-204ENST00000580396 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
CPD-204ENST00000580396 VPS8Q8N3P4 1428 aa13.8□□□□□ -0.2
CPD-204ENST00000580396 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
CPD-204ENST00000580396 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
CPD-204ENST00000580396 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
CPD-204ENST00000580396 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
CPD-204ENST00000580396 CHD1O14646 1710 aa13.75□□□□□ -0.21
CPD-204ENST00000580396 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
CPD-204ENST00000580396 APLP2Q06481 763 aa13.72□□□□□ -0.21
CPD-204ENST00000580396 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.22
CPD-204ENST00000580396 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
CPD-204ENST00000580396 BCANQ96GW7 911 aa13.7□□□□□ -0.22
CPD-204ENST00000580396 ADRA2BP18089 450 aa13.69□□□□□ -0.22
CPD-204ENST00000580396 GTF3C3Q9Y5Q9 886 aa13.68□□□□□ -0.22
CPD-204ENST00000580396 CFTRP13569 1480 aa13.67□□□□□ -0.22
CPD-204ENST00000580396 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
CPD-204ENST00000580396 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
CPD-204ENST00000580396 SOCS7O14512 581 aa13.64□□□□□ -0.23
CPD-204ENST00000580396 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
CPD-204ENST00000580396 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
CPD-204ENST00000580396 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
CPD-204ENST00000580396 ZBTB22O15209 634 aa13.61□□□□□ -0.23
CPD-204ENST00000580396 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
CPD-204ENST00000580396 KDM6BO15054 1643 aa13.58□□□□□ -0.24
CPD-204ENST00000580396 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
CPD-204ENST00000580396 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
CPD-204ENST00000580396 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
CPD-204ENST00000580396 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
CPD-204ENST00000580396 CUX1P39880 1505 aa13.56□□□□□ -0.24
CPD-204ENST00000580396 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
CPD-204ENST00000580396 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
CPD-204ENST00000580396 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
CPD-204ENST00000580396 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
CPD-204ENST00000580396 MIER1Q8N108 512 aa13.54□□□□□ -0.24
CPD-204ENST00000580396 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
CPD-204ENST00000580396 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
CPD-204ENST00000580396 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
CPD-204ENST00000580396 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
CPD-204ENST00000580396 RRBP1Q9P2E9 1410 aaKnown RBP13.52□□□□□ -0.24
CPD-204ENST00000580396 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
CPD-204ENST00000580396 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
CPD-204ENST00000580396 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
CPD-204ENST00000580396 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
CPD-204ENST00000580396 GLI2P10070 1586 aa13.49□□□□□ -0.25
CPD-204ENST00000580396 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
CPD-204ENST00000580396 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
CPD-204ENST00000580396 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
CPD-204ENST00000580396 TRHP20396 242 aaPredicted RBP13.45□□□□□ -0.26
CPD-204ENST00000580396 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
CPD-204ENST00000580396 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
CPD-204ENST00000580396 MAP3K1Q13233 1512 aa13.42□□□□□ -0.26
CPD-204ENST00000580396 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
CPD-204ENST00000580396 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
CPD-204ENST00000580396 MYT1Q01538 1121 aa13.38□□□□□ -0.27
CPD-204ENST00000580396 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
CPD-204ENST00000580396 KIAA0586Q9BVV6 1533 aa13.37□□□□□ -0.27
CPD-204ENST00000580396 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
CPD-204ENST00000580396 SPATA31D1Q6ZQQ2 1576 aa13.34□□□□□ -0.27
CPD-204ENST00000580396 IGF1RP08069 1367 aa13.34□□□□□ -0.27
CPD-204ENST00000580396 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
CPD-204ENST00000580396 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
CPD-204ENST00000580396 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
CPD-204ENST00000580396 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
CPD-204ENST00000580396 CYB5RLQ6IPT4 315 aa13.3□□□□□ -0.28
CPD-204ENST00000580396 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
CPD-204ENST00000580396 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
CPD-204ENST00000580396 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
CPD-204ENST00000580396 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
CPD-204ENST00000580396 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
CPD-204ENST00000580396 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
CPD-204ENST00000580396 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
CPD-204ENST00000580396 FKBP8Q14318 412 aa13.25□□□□□ -0.29
CPD-204ENST00000580396 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
CPD-204ENST00000580396 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
CPD-204ENST00000580396 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
CPD-204ENST00000580396 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
CPD-204ENST00000580396 ITGAEP38570 1179 aa13.2□□□□□ -0.3
CPD-204ENST00000580396 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
CPD-204ENST00000580396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPD-204ENST00000580396 AQRO60306 1485 aaKnown RBP eCLIP13.19□□□□□ -0.34e-6■■■■■ 34.1
CPD-204ENST00000580396 SUPT16HQ9Y5B9 1047 aaKnown RBP13.19□□□□□ -0.3
CPD-204ENST00000580396 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
CPD-204ENST00000580396 CUL7Q14999 1698 aa13.18□□□□□ -0.3
CPD-204ENST00000580396 PBRM1Q86U86 1689 aa13.18□□□□□ -0.3
CPD-204ENST00000580396 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
CPD-204ENST00000580396 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
CPD-204ENST00000580396 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
CPD-204ENST00000580396 NUP160Q12769 1436 aa13.15□□□□□ -0.3
CPD-204ENST00000580396 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
CPD-204ENST00000580396 TEX14Q8IWB6 1497 aa13.12□□□□□ -0.31
CPD-204ENST00000580396 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
CPD-204ENST00000580396 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
CPD-204ENST00000580396 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
CPD-204ENST00000580396 FAM50AQ14320 339 aaKnown RBP13.11□□□□□ -0.31
CPD-204ENST00000580396 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
CPD-204ENST00000580396 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
CPD-204ENST00000580396 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms