RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ILDR1	Q86SU0	546 aa	Predicted RBP	11.91	□□□□□ -0.5
KPNB1-209	ENST00000580158	RSF1	Q96T23	1441 aa	Predicted RBP	11.91	□□□□□ -0.5
KPNB1-209	ENST00000580158	IFT140	Q96RY7	1462 aa		11.9	□□□□□ -0.5
KPNB1-209	ENST00000580158	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.9	□□□□□ -0.5
KPNB1-209	ENST00000580158	CFTR	P13569	1480 aa		11.89	□□□□□ -0.51
KPNB1-209	ENST00000580158	FBLN2	P98095	1184 aa		11.86	□□□□□ -0.51
KPNB1-209	ENST00000580158	REM2	Q8IYK8	340 aa	Predicted RBP	11.86	□□□□□ -0.51
KPNB1-209	ENST00000580158	EIF4G3	O43432	1585 aa	Known RBP	11.84	□□□□□ -0.51
KPNB1-209	ENST00000580158	PRDM2	Q13029	1718 aa		11.84	□□□□□ -0.51
KPNB1-209	ENST00000580158	WIZ	O95785	1651 aa		11.84	□□□□□ -0.51
KPNB1-209	ENST00000580158	SPDYE2B	A6NHP3	402 aa		11.73	□□□□□ -0.53
KPNB1-209	ENST00000580158	AQR	O60306	1485 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
KPNB1-209	ENST00000580158	SPDYE6	P0CI01	402 aa		11.73	□□□□□ -0.53
KPNB1-209	ENST00000580158	ABCC8	Q09428	1581 aa		11.73	□□□□□ -0.53
KPNB1-209	ENST00000580158	SPDYE2	Q495Y8	402 aa		11.73	□□□□□ -0.53
KPNB1-209	ENST00000580158	TOPBP1	Q92547	1522 aa		11.73	□□□□□ -0.53
KPNB1-209	ENST00000580158	PITPNM1	O00562	1244 aa		11.71	□□□□□ -0.53
KPNB1-209	ENST00000580158	PIP4P2	Q8N4L2	257 aa		11.71	□□□□□ -0.53
KPNB1-209	ENST00000580158	SYNJ1	O43426	1573 aa		11.7	□□□□□ -0.54
KPNB1-209	ENST00000580158	CLASP1	Q7Z460	1538 aa		11.7	□□□□□ -0.54
KPNB1-209	ENST00000580158	TARBP1	Q13395	1621 aa	Known RBP	11.68	□□□□□ -0.54
KPNB1-209	ENST00000580158	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.66	□□□□□ -0.54
KPNB1-209	ENST00000580158	DNMBP	Q6XZF7	1577 aa		11.66	□□□□□ -0.54
KPNB1-209	ENST00000580158	GAPVD1	Q14C86	1478 aa		11.65	□□□□□ -0.54
KPNB1-209	ENST00000580158	FXR2	P51116	673 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	3e-16	■■■■□ 19.3
KPNB1-209	ENST00000580158	KIF13A	Q9H1H9	1805 aa		11.63	□□□□□ -0.55
KPNB1-209	ENST00000580158	MKRN4P	Q13434	485 aa	Predicted RBP	11.62	□□□□□ -0.55
KPNB1-209	ENST00000580158	TOP2A	P11388	1531 aa	Known RBP	11.61	□□□□□ -0.55
KPNB1-209	ENST00000580158	ZNF692	Q9BU19	519 aa	Predicted RBP	11.61	□□□□□ -0.55
KPNB1-209	ENST00000580158	SNAPC4	Q5SXM2	1469 aa		11.6	□□□□□ -0.55
KPNB1-209	ENST00000580158	SP7	Q8TDD2	431 aa	Predicted RBP	11.59	□□□□□ -0.55
KPNB1-209	ENST00000580158	KDM4F	A0A1W2PPD8	638 aa		11.58	□□□□□ -0.56
KPNB1-209	ENST00000580158	HAX1	O00165	279 aa		11.58	□□□□□ -0.56
KPNB1-209	ENST00000580158	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.57	□□□□□ -0.56
KPNB1-209	ENST00000580158	WDR97	A6NE52	1622 aa		11.57	□□□□□ -0.56
KPNB1-209	ENST00000580158	TDRD9	Q8NDG6	1382 aa	Known RBP	11.56	□□□□□ -0.56
KPNB1-209	ENST00000580158	POLA1	P09884	1462 aa	Predicted RBP	11.56	□□□□□ -0.56
KPNB1-209	ENST00000580158	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.55	□□□□□ -0.56
KPNB1-209	ENST00000580158	CLEC11A	Q9Y240	323 aa		11.55	□□□□□ -0.56
KPNB1-209	ENST00000580158	SOGA1	O94964	1423 aa		11.53	□□□□□ -0.56
KPNB1-209	ENST00000580158	SYNJ2	O15056	1496 aa		11.53	□□□□□ -0.56
KPNB1-209	ENST00000580158	RAD54L2	Q9Y4B4	1467 aa		11.52	□□□□□ -0.56
KPNB1-209	ENST00000580158	CSRNP3	Q8WYN3	585 aa		11.52	□□□□□ -0.57
KPNB1-209	ENST00000580158	SSUH2	Q9Y2M2	353 aa		11.52	□□□□□ -0.57
KPNB1-209	ENST00000580158	GRIN2B	Q13224	1484 aa		11.5	□□□□□ -0.57
KPNB1-209	ENST00000580158	ERCC6L2	Q5T890	1561 aa		11.5	□□□□□ -0.57
KPNB1-209	ENST00000580158	KDM6B	O15054	1643 aa		11.49	□□□□□ -0.57
KPNB1-209	ENST00000580158	CCDC88B	A6NC98	1476 aa		11.48	□□□□□ -0.57
KPNB1-209	ENST00000580158	FAM69C	Q0P6D2	419 aa		11.47	□□□□□ -0.57
KPNB1-209	ENST00000580158	PBRM1	Q86U86	1689 aa		11.46	□□□□□ -0.57
KPNB1-209	ENST00000580158	PRKAR2A	P13861	404 aa	Known RBP	11.45	□□□□□ -0.58
KPNB1-209	ENST00000580158	FBXO41	Q8TF61	875 aa		11.44	□□□□□ -0.58
KPNB1-209	ENST00000580158	TSPOAP1	O95153	1857 aa		11.44	□□□□□ -0.58
KPNB1-209	ENST00000580158	NPM1	P06748	294 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
KPNB1-209	ENST00000580158	CEP170	Q5SW79	1584 aa		11.41	□□□□□ -0.58
KPNB1-209	ENST00000580158	HECW2	Q9P2P5	1572 aa		11.41	□□□□□ -0.58
KPNB1-209	ENST00000580158	ABCC10	Q5T3U5	1492 aa		11.41	□□□□□ -0.58
KPNB1-209	ENST00000580158	FGD5	Q6ZNL6	1462 aa		11.41	□□□□□ -0.58
KPNB1-209	ENST00000580158	DIP2B	Q9P265	1576 aa		11.37	□□□□□ -0.59
KPNB1-209	ENST00000580158	PRR29	P0C7W0	189 aa		11.36	□□□□□ -0.59
KPNB1-209	ENST00000580158	EHMT2	Q96KQ7	1210 aa		11.36	□□□□□ -0.59
KPNB1-209	ENST00000580158	ADGRL1	O94910	1474 aa		11.36	□□□□□ -0.59
KPNB1-209	ENST00000580158	SHROOM2	Q13796	1616 aa		11.35	□□□□□ -0.59
KPNB1-209	ENST00000580158	EVX2	Q03828	476 aa		11.34	□□□□□ -0.59
KPNB1-209	ENST00000580158	MAPKBP1	O60336	1514 aa		11.34	□□□□□ -0.59
KPNB1-209	ENST00000580158	GRIN2A	Q12879	1464 aa		11.33	□□□□□ -0.6
KPNB1-209	ENST00000580158	LMTK3	Q96Q04	1460 aa		11.33	□□□□□ -0.6
KPNB1-209	ENST00000580158	NUP160	Q12769	1436 aa		11.3	□□□□□ -0.6
KPNB1-209	ENST00000580158	CHADL	Q6NUI6	762 aa		11.29	□□□□□ -0.6
KPNB1-209	ENST00000580158	ABCA5	Q8WWZ7	1642 aa		11.28	□□□□□ -0.6
KPNB1-209	ENST00000580158	CUX1	P39880	1505 aa		11.28	□□□□□ -0.6
KPNB1-209	ENST00000580158	PRG4	Q92954	1404 aa	Predicted RBP	11.27	□□□□□ -0.6
KPNB1-209	ENST00000580158	C19orf67	A6NJJ6	358 aa		11.26	□□□□□ -0.61
KPNB1-209	ENST00000580158	SOCS7	O14512	581 aa		11.25	□□□□□ -0.61
KPNB1-209	ENST00000580158	ADAMTS12	P58397	1594 aa		11.24	□□□□□ -0.61
KPNB1-209	ENST00000580158	JPH4	Q96JJ6	628 aa		11.24	□□□□□ -0.61
KPNB1-209	ENST00000580158	ABCA10	Q8WWZ4	1543 aa		11.24	□□□□□ -0.61
KPNB1-209	ENST00000580158	ADCY10	Q96PN6	1610 aa		11.23	□□□□□ -0.61
KPNB1-209	ENST00000580158	TOP2B	Q02880	1626 aa		11.2	□□□□□ -0.62
KPNB1-209	ENST00000580158	FHAD1	B1AJZ9	1412 aa		11.2	□□□□□ -0.62
KPNB1-209	ENST00000580158	PPRC1	Q5VV67	1664 aa	Known RBP	11.17	□□□□□ -0.62
KPNB1-209	ENST00000580158	DISP3	Q9P2K9	1392 aa		11.15	□□□□□ -0.63
KPNB1-209	ENST00000580158	ILDR2	Q71H61	639 aa		11.14	□□□□□ -0.63
KPNB1-209	ENST00000580158	GABBR2	O75899	941 aa		11.13	□□□□□ -0.63
KPNB1-209	ENST00000580158	STAG3	Q9UJ98	1225 aa		11.13	□□□□□ -0.63
KPNB1-209	ENST00000580158	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.13	□□□□□ -0.63
KPNB1-209	ENST00000580158	GLI2	P10070	1586 aa		11.12	□□□□□ -0.63
KPNB1-209	ENST00000580158	ERICH3	Q5RHP9	1530 aa		11.11	□□□□□ -0.63
KPNB1-209	ENST00000580158	SPDYE4	A6NLX3	237 aa		11.11	□□□□□ -0.63
KPNB1-209	ENST00000580158	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.09	□□□□□ -0.63
KPNB1-209	ENST00000580158	RUSC2	Q8N2Y8	1516 aa		11.09	□□□□□ -0.63
KPNB1-209	ENST00000580158	PLB1	Q6P1J6	1458 aa		11.09	□□□□□ -0.63
KPNB1-209	ENST00000580158	TEX14	Q8IWB6	1497 aa		11.09	□□□□□ -0.63
KPNB1-209	ENST00000580158	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.08	□□□□□ -0.64
KPNB1-209	ENST00000580158	CD44	P16070	742 aa	Known RBP	11.08	□□□□□ -0.64
KPNB1-209	ENST00000580158	ASXL2	Q76L83	1435 aa		11.07	□□□□□ -0.64
KPNB1-209	ENST00000580158	CUL7	Q14999	1698 aa		11.06	□□□□□ -0.64
KPNB1-209	ENST00000580158	MAP3K4	Q9Y6R4	1608 aa		11.06	□□□□□ -0.64
KPNB1-209	ENST00000580158	ABCC2	Q92887	1545 aa		11.04	□□□□□ -0.64
KPNB1-209	ENST00000580158	PTPRG	P23470	1445 aa		11.03	□□□□□ -0.64

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