RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 ARHGEF11O15085 1522 aa35.98■■■■□ 3.35
TSEN54-207ENST00000580013 RIMBP3CA6NJZ7 1639 aa35.93■■■■□ 3.34
TSEN54-207ENST00000580013 RIMBP3BA6NNM3 1639 aa35.93■■■■□ 3.34
TSEN54-207ENST00000580013 RIMBP3Q9UFD9 1639 aa35.93■■■■□ 3.34
TSEN54-207ENST00000580013 SHROOM2Q13796 1616 aa35.9■■■■□ 3.34
TSEN54-207ENST00000580013 PRG4Q92954 1404 aaPredicted RBP35.8■■■■□ 3.32
TSEN54-207ENST00000580013 ERCC6L2Q5T890 1561 aa35.79■■■■□ 3.32
TSEN54-207ENST00000580013 ARAP1Q96P48 1450 aa35.76■■■■□ 3.32
TSEN54-207ENST00000580013 KIF21BO75037 1637 aa35.75■■■■□ 3.31
TSEN54-207ENST00000580013 CYB5RLQ6IPT4 315 aa35.73■■■■□ 3.31
TSEN54-207ENST00000580013 IQGAP2Q13576 1575 aa35.72■■■■□ 3.31
TSEN54-207ENST00000580013 UGGT2Q9NYU1 1516 aa35.64■■■■□ 3.3
TSEN54-207ENST00000580013 CTTNBP2Q8WZ74 1663 aa35.59■■■■□ 3.29
TSEN54-207ENST00000580013 DISP1Q96F81 1524 aa35.57■■■■□ 3.29
TSEN54-207ENST00000580013 GOLGA3Q08378 1498 aa35.57■■■■□ 3.28
TSEN54-207ENST00000580013 CARMIL2Q6F5E8 1435 aa35.54■■■■□ 3.28
TSEN54-207ENST00000580013 EHMT2Q96KQ7 1210 aa35.52■■■■□ 3.28
TSEN54-207ENST00000580013 UBTFP17480 764 aaKnown RBP35.51■■■■□ 3.28
TSEN54-207ENST00000580013 TNIKQ9UKE5 1360 aa35.47■■■■□ 3.27
TSEN54-207ENST00000580013 PTPRGP23470 1445 aa35.43■■■■□ 3.26
TSEN54-207ENST00000580013 KIAA0556O60303 1618 aa35.39■■■■□ 3.26
TSEN54-207ENST00000580013 P3H3Q8IVL6 736 aa35.3■■■■□ 3.24
TSEN54-207ENST00000580013 SAMD9Q5K651 1589 aa35.3■■■■□ 3.24
TSEN54-207ENST00000580013 RANGAP1P46060 587 aaPredicted RBP35.28■■■■□ 3.24
TSEN54-207ENST00000580013 TTBK1Q5TCY1 1321 aaPredicted RBP35.28■■■■□ 3.24
TSEN54-207ENST00000580013 LOC105371045A0A1W2PR82 267 aa35.24■■■■□ 3.23
TSEN54-207ENST00000580013 UACAQ9BZF9 1416 aa35.19■■■■□ 3.22
TSEN54-207ENST00000580013 UHRF1BP1LA0JNW5 1464 aa35.16■■■■□ 3.22
TSEN54-207ENST00000580013 EFCAB5A4FU69 1503 aa35.16■■■■□ 3.22
TSEN54-207ENST00000580013 ADCY10Q96PN6 1610 aa35.15■■■■□ 3.22
TSEN54-207ENST00000580013 ARHGAP35Q9NRY4 1499 aa35.13■■■■□ 3.21
TSEN54-207ENST00000580013 FHOD3Q2V2M9 1422 aa35.12■■■■□ 3.21
TSEN54-207ENST00000580013 PLB1Q6P1J6 1458 aa35.09■■■■□ 3.21
TSEN54-207ENST00000580013 ABCA8O94911 1581 aa35.06■■■■□ 3.2
TSEN54-207ENST00000580013 ABCC2Q92887 1545 aa35.06■■■■□ 3.2
TSEN54-207ENST00000580013 NPM1P06748 294 aaKnown RBP eCLIP35.04■■■■□ 3.2
TSEN54-207ENST00000580013 KDM5BQ9UGL1 1544 aa34.98■■■■□ 3.19
TSEN54-207ENST00000580013 CLIP1P30622 1438 aa34.98■■■■□ 3.19
TSEN54-207ENST00000580013 MAPKBP1O60336 1514 aa34.89■■■■□ 3.18
TSEN54-207ENST00000580013 CEP162Q5TB80 1403 aa34.89■■■■□ 3.18
TSEN54-207ENST00000580013 FMN1Q68DA7 1419 aa34.88■■■■□ 3.17
TSEN54-207ENST00000580013 RAPGEF6Q8TEU7 1601 aa34.85■■■■□ 3.17
TSEN54-207ENST00000580013 ATP10BO94823 1461 aa34.84■■■■□ 3.17
TSEN54-207ENST00000580013 NUP153P49790 1475 aaKnown RBP34.83■■■■□ 3.17
TSEN54-207ENST00000580013 TRHP20396 242 aaPredicted RBP34.81■■■■□ 3.16
TSEN54-207ENST00000580013 ASXL2Q76L83 1435 aa34.8■■■■□ 3.16
TSEN54-207ENST00000580013 ZCCHC11Q5TAX3 1644 aaKnown RBP34.79■■■■□ 3.16
TSEN54-207ENST00000580013 ARID3CA6NKF2 412 aa34.75■■■■□ 3.15
TSEN54-207ENST00000580013 ABCC10Q5T3U5 1492 aa34.74■■■■□ 3.15
TSEN54-207ENST00000580013 CASKIN1Q8WXD9 1431 aa34.69■■■■□ 3.14
TSEN54-207ENST00000580013 FAM69CQ0P6D2 419 aa34.68■■■■□ 3.14
TSEN54-207ENST00000580013 WDR7Q9Y4E6 1490 aa34.63■■■■□ 3.13
TSEN54-207ENST00000580013 ATP1B4Q9UN42 357 aaPredicted RBP34.62■■■■□ 3.13
TSEN54-207ENST00000580013 DIP2BQ9P265 1576 aa34.61■■■■□ 3.13
TSEN54-207ENST00000580013 EPRSP07814 1512 aaKnown RBP34.6■■■■□ 3.13
TSEN54-207ENST00000580013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.59■■■■□ 3.13
TSEN54-207ENST00000580013 HNRNPUL2Q1KMD3 747 aaKnown RBP34.59■■■■□ 3.13
TSEN54-207ENST00000580013 HECW1Q76N89 1606 aa34.57■■■■□ 3.12
TSEN54-207ENST00000580013 KIF13AQ9H1H9 1805 aa34.57■■■■□ 3.12
TSEN54-207ENST00000580013 PCF11O94913 1555 aaKnown RBP34.55■■■■□ 3.12
TSEN54-207ENST00000580013 GLI2P10070 1586 aa34.55■■■■□ 3.12
TSEN54-207ENST00000580013 PLEKHD1A6NEE1 506 aa34.55■■■■□ 3.12
TSEN54-207ENST00000580013 CDK13Q14004 1512 aaKnown RBP34.55■■■■□ 3.12
TSEN54-207ENST00000580013 FYCO1Q9BQS8 1478 aa34.54■■■■□ 3.12
TSEN54-207ENST00000580013 KCNH8Q96L42 1107 aa34.54■■■■□ 3.12
TSEN54-207ENST00000580013 LRRIQ1Q96JM4 1722 aa34.46■■■■□ 3.11
TSEN54-207ENST00000580013 VPS8Q8N3P4 1428 aa34.46■■■■□ 3.11
TSEN54-207ENST00000580013 CDK11AQ9UQ88 783 aaPredicted RBP34.44■■■■□ 3.1
TSEN54-207ENST00000580013 CCDC18Q5T9S5 1454 aa34.43■■■■□ 3.1
TSEN54-207ENST00000580013 MAP3K4Q9Y6R4 1608 aa34.33■■■■□ 3.09
TSEN54-207ENST00000580013 TROQ12816 1431 aaPredicted RBP34.33■■■■□ 3.09
TSEN54-207ENST00000580013 CD109Q6YHK3 1445 aa34.33■■■■□ 3.09
TSEN54-207ENST00000580013 MAGI3Q5TCQ9 1506 aa34.3■■■■□ 3.08
TSEN54-207ENST00000580013 ABCA9Q8IUA7 1624 aa34.28■■■■□ 3.08
TSEN54-207ENST00000580013 PPRC1Q5VV67 1664 aaKnown RBP34.26■■■■□ 3.08
TSEN54-207ENST00000580013 CFAP43Q8NDM7 1665 aa34.24■■■■□ 3.07
TSEN54-207ENST00000580013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.24■■■■□ 3.07
TSEN54-207ENST00000580013 TSPOAP1O95153 1857 aa34.21■■■■□ 3.07
TSEN54-207ENST00000580013 MAP3K1Q13233 1512 aa34.17■■■■□ 3.06
TSEN54-207ENST00000580013 KIF14Q15058 1648 aa34.15■■■■□ 3.06
TSEN54-207ENST00000580013 TEX14Q8IWB6 1497 aa34.14■■■■□ 3.06
TSEN54-207ENST00000580013 MTUS2Q5JR59 1369 aa34.12■■■■□ 3.05
TSEN54-207ENST00000580013 TTC37Q6PGP7 1564 aa34.12■■■■□ 3.05
TSEN54-207ENST00000580013 PLCH2O75038 1416 aa34.12■■■■□ 3.05
TSEN54-207ENST00000580013 TIAM1Q13009 1591 aa34.11■■■■□ 3.05
TSEN54-207ENST00000580013 KANK4Q5T7N3 995 aaPredicted RBP34.1■■■■□ 3.05
TSEN54-207ENST00000580013 COL17A1Q9UMD9 1497 aaPredicted RBP34.07■■■■□ 3.04
TSEN54-207ENST00000580013 PHLDB1Q86UU1 1377 aa34.05■■■■□ 3.04
TSEN54-207ENST00000580013 LRRC9Q6ZRR7 1453 aa34.04■■■■□ 3.04
TSEN54-207ENST00000580013 EHBP1L1Q8N3D4 1523 aa34.02■■■■□ 3.04
TSEN54-207ENST00000580013 NEO1Q92859 1461 aa34.01■■■■□ 3.04
TSEN54-207ENST00000580013 ARAP3Q8WWN8 1544 aa33.99■■■■□ 3.03
TSEN54-207ENST00000580013 APLP2Q06481 763 aa33.99■■■■□ 3.03
TSEN54-207ENST00000580013 EFCAB2Q5VUJ9 269 aa33.97■■■■□ 3.03
TSEN54-207ENST00000580013 FANCAO15360 1455 aa33.96■■■■□ 3.03
TSEN54-207ENST00000580013 GPATCH8Q9UKJ3 1502 aaKnown RBP33.96■■■■□ 3.03
TSEN54-207ENST00000580013 AKNAQ7Z591 1439 aa33.95■■■■□ 3.02
TSEN54-207ENST00000580013 KDM6BO15054 1643 aa33.91■■■■□ 3.02
TSEN54-207ENST00000580013 CCNB3Q8WWL7 1395 aa33.9■■■■□ 3.02
TSEN54-207ENST00000580013 MYO5CQ9NQX4 1742 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms