RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 GTF3C3Q9Y5Q9 886 aa23.83■■□□□ 1.41
DDX42-208ENST00000578681 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.4
DDX42-208ENST00000578681 ZNF777Q9ULD5 760 aaPredicted RBP23.82■■□□□ 1.4
DDX42-208ENST00000578681 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
DDX42-208ENST00000578681 CNGB1Q14028 1251 aaPredicted RBP23.81■■□□□ 1.4
DDX42-208ENST00000578681 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
DDX42-208ENST00000578681 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
DDX42-208ENST00000578681 SIN3AQ96ST3 1273 aa23.78■■□□□ 1.4
DDX42-208ENST00000578681 RRP7BPQ9NSQ0 103 aa23.76■■□□□ 1.39
DDX42-208ENST00000578681 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
DDX42-208ENST00000578681 POLR3GLQ9BT43 218 aa23.73■■□□□ 1.39
DDX42-208ENST00000578681 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
DDX42-208ENST00000578681 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
DDX42-208ENST00000578681 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
DDX42-208ENST00000578681 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
DDX42-208ENST00000578681 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
DDX42-208ENST00000578681 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.38
DDX42-208ENST00000578681 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
DDX42-208ENST00000578681 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
DDX42-208ENST00000578681 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
DDX42-208ENST00000578681 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
DDX42-208ENST00000578681 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
DDX42-208ENST00000578681 CDK11AQ9UQ88 783 aaPredicted RBP23.58■■□□□ 1.37
DDX42-208ENST00000578681 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
DDX42-208ENST00000578681 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
DDX42-208ENST00000578681 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
DDX42-208ENST00000578681 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.368e-7■■■■□ 26.5
DDX42-208ENST00000578681 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
DDX42-208ENST00000578681 PHLDB1Q86UU1 1377 aa23.52■■□□□ 1.36
DDX42-208ENST00000578681 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
DDX42-208ENST00000578681 FMN1Q68DA7 1419 aa23.48■■□□□ 1.35
DDX42-208ENST00000578681 CLSPNQ9HAW4 1339 aa23.45■■□□□ 1.34
DDX42-208ENST00000578681 PRKCSHP14314 528 aaPredicted RBP23.45■■□□□ 1.34
DDX42-208ENST00000578681 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
DDX42-208ENST00000578681 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.34
DDX42-208ENST00000578681 ANP32CO43423 234 aa23.39■■□□□ 1.34
DDX42-208ENST00000578681 FOXD1Q16676 465 aa23.39■■□□□ 1.34
DDX42-208ENST00000578681 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.33
DDX42-208ENST00000578681 CFDP1Q9UEE9 299 aaPredicted RBP23.36■■□□□ 1.33
DDX42-208ENST00000578681 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
DDX42-208ENST00000578681 BCANQ96GW7 911 aa23.33■■□□□ 1.32
DDX42-208ENST00000578681 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.32
DDX42-208ENST00000578681 RRBP1Q9P2E9 1410 aaKnown RBP23.32■■□□□ 1.32
DDX42-208ENST00000578681 PLEKHD1A6NEE1 506 aa23.31■■□□□ 1.32
DDX42-208ENST00000578681 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
DDX42-208ENST00000578681 NEFLP07196 543 aa23.29■■□□□ 1.32
DDX42-208ENST00000578681 LAMC3Q9Y6N6 1575 aa23.24■■□□□ 1.31
DDX42-208ENST00000578681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.24■■□□□ 1.316e-7■■□□□ 13.1
DDX42-208ENST00000578681 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
DDX42-208ENST00000578681 CASKIN1Q8WXD9 1431 aa23.24■■□□□ 1.31
DDX42-208ENST00000578681 JPH4Q96JJ6 628 aa23.24■■□□□ 1.31
DDX42-208ENST00000578681 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
DDX42-208ENST00000578681 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
DDX42-208ENST00000578681 ZNF644Q9H582 1327 aaPredicted RBP23.2■■□□□ 1.3
DDX42-208ENST00000578681 KDM2AQ9Y2K7 1162 aa23.19■■□□□ 1.3
DDX42-208ENST00000578681 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
DDX42-208ENST00000578681 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
DDX42-208ENST00000578681 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
DDX42-208ENST00000578681 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.3
DDX42-208ENST00000578681 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
DDX42-208ENST00000578681 ZNF608Q9ULD9 1512 aaPredicted RBP23.12■■□□□ 1.29
DDX42-208ENST00000578681 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
DDX42-208ENST00000578681 MPHOSPH9Q99550 1183 aa23.11■■□□□ 1.29
DDX42-208ENST00000578681 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
DDX42-208ENST00000578681 EIF4G2P78344 907 aaKnown RBP eCLIP23.08■■□□□ 1.287e-6■□□□□ 9.1
DDX42-208ENST00000578681 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
DDX42-208ENST00000578681 EFCAB5A4FU69 1503 aa23.06■■□□□ 1.28
DDX42-208ENST00000578681 CCDC18Q5T9S5 1454 aa23.05■■□□□ 1.28
DDX42-208ENST00000578681 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
DDX42-208ENST00000578681 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
DDX42-208ENST00000578681 RGL3Q3MIN7 710 aa23.03■■□□□ 1.28
DDX42-208ENST00000578681 HNRNPUQ00839 825 aaKnown RBP eCLIP23.02■■□□□ 1.28
DDX42-208ENST00000578681 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
DDX42-208ENST00000578681 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.28
DDX42-208ENST00000578681 HNRNPMP52272 730 aaKnown RBP eCLIP23■■□□□ 1.276e-6■■■■□ 20.3
DDX42-208ENST00000578681 L3MBTL2Q969R5 705 aa23■■□□□ 1.27
DDX42-208ENST00000578681 CUL7Q14999 1698 aa23■■□□□ 1.27
DDX42-208ENST00000578681 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
DDX42-208ENST00000578681 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
DDX42-208ENST00000578681 PRDM2Q13029 1718 aa22.98■■□□□ 1.27
DDX42-208ENST00000578681 FKBP8Q14318 412 aa22.97■■□□□ 1.27
DDX42-208ENST00000578681 HSPA5P11021 654 aaKnown RBP22.97■■□□□ 1.27
DDX42-208ENST00000578681 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
DDX42-208ENST00000578681 PKD2Q13563 968 aa22.96■■□□□ 1.27
DDX42-208ENST00000578681 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
DDX42-208ENST00000578681 ANP32EQ9BTT0 268 aa22.89■■□□□ 1.26
DDX42-208ENST00000578681 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
DDX42-208ENST00000578681 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
DDX42-208ENST00000578681 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
DDX42-208ENST00000578681 MRS2Q9HD23 443 aa22.86■■□□□ 1.25
DDX42-208ENST00000578681 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
DDX42-208ENST00000578681 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
DDX42-208ENST00000578681 PTPRKQ15262 1439 aa22.85■■□□□ 1.25
DDX42-208ENST00000578681 UACAQ9BZF9 1416 aa22.85■■□□□ 1.25
DDX42-208ENST00000578681 PTPRGP23470 1445 aa22.84■■□□□ 1.25
DDX42-208ENST00000578681 NUP155O75694 1391 aa22.83■■□□□ 1.25
DDX42-208ENST00000578681 DCAF11Q8TEB1 546 aa22.82■■□□□ 1.24
DDX42-208ENST00000578681 NAIPQ13075 1403 aa22.81■■□□□ 1.24
DDX42-208ENST00000578681 WDR97A6NE52 1622 aa22.81■■□□□ 1.24
DDX42-208ENST00000578681 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms