RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
NCOA4-201ENST00000578454 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
NCOA4-201ENST00000578454 CLIP1P30622 1438 aa13.4□□□□□ -0.26
NCOA4-201ENST00000578454 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
NCOA4-201ENST00000578454 CTTNBP2Q8WZ74 1663 aa13.35□□□□□ -0.27
NCOA4-201ENST00000578454 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
NCOA4-201ENST00000578454 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
NCOA4-201ENST00000578454 GRIN2AQ12879 1464 aa13.33□□□□□ -0.28
NCOA4-201ENST00000578454 FBLN2P98095 1184 aa13.31□□□□□ -0.28
NCOA4-201ENST00000578454 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
NCOA4-201ENST00000578454 VPS8Q8N3P4 1428 aa13.26□□□□□ -0.29
NCOA4-201ENST00000578454 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
NCOA4-201ENST00000578454 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
NCOA4-201ENST00000578454 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
NCOA4-201ENST00000578454 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
NCOA4-201ENST00000578454 NUP160Q12769 1436 aa13.23□□□□□ -0.29
NCOA4-201ENST00000578454 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
NCOA4-201ENST00000578454 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
NCOA4-201ENST00000578454 P3H3Q8IVL6 736 aa13.21□□□□□ -0.29
NCOA4-201ENST00000578454 CHD1O14646 1710 aa13.21□□□□□ -0.3
NCOA4-201ENST00000578454 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
NCOA4-201ENST00000578454 APLP2Q06481 763 aa13.19□□□□□ -0.3
NCOA4-201ENST00000578454 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
NCOA4-201ENST00000578454 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
NCOA4-201ENST00000578454 FMN1Q68DA7 1419 aa13.15□□□□□ -0.3
NCOA4-201ENST00000578454 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
NCOA4-201ENST00000578454 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
NCOA4-201ENST00000578454 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
NCOA4-201ENST00000578454 SLC4A1APQ9BWU0 796 aaKnown RBP13.12□□□□□ -0.31
NCOA4-201ENST00000578454 DISP1Q96F81 1524 aa13.12□□□□□ -0.31
NCOA4-201ENST00000578454 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
NCOA4-201ENST00000578454 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
NCOA4-201ENST00000578454 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
NCOA4-201ENST00000578454 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
NCOA4-201ENST00000578454 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
NCOA4-201ENST00000578454 PCF11O94913 1555 aaKnown RBP13.08□□□□□ -0.32
NCOA4-201ENST00000578454 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
NCOA4-201ENST00000578454 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
NCOA4-201ENST00000578454 MAP3K1Q13233 1512 aa13.06□□□□□ -0.32
NCOA4-201ENST00000578454 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
NCOA4-201ENST00000578454 SHROOM2Q13796 1616 aa13.05□□□□□ -0.32
NCOA4-201ENST00000578454 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
NCOA4-201ENST00000578454 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
NCOA4-201ENST00000578454 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
NCOA4-201ENST00000578454 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
NCOA4-201ENST00000578454 ADRA2BP18089 450 aa13.02□□□□□ -0.32
NCOA4-201ENST00000578454 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.33
NCOA4-201ENST00000578454 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
NCOA4-201ENST00000578454 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
NCOA4-201ENST00000578454 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
NCOA4-201ENST00000578454 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
NCOA4-201ENST00000578454 PTPRGP23470 1445 aa12.99□□□□□ -0.33
NCOA4-201ENST00000578454 RAPGEF6Q8TEU7 1601 aa12.98□□□□□ -0.33
NCOA4-201ENST00000578454 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
NCOA4-201ENST00000578454 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.34
NCOA4-201ENST00000578454 LRRIQ1Q96JM4 1722 aa12.95□□□□□ -0.34
NCOA4-201ENST00000578454 PLB1Q6P1J6 1458 aa12.95□□□□□ -0.34
NCOA4-201ENST00000578454 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
NCOA4-201ENST00000578454 NUP153P49790 1475 aaKnown RBP12.94□□□□□ -0.34
NCOA4-201ENST00000578454 ABCA8O94911 1581 aa12.93□□□□□ -0.34
NCOA4-201ENST00000578454 MTUS2Q5JR59 1369 aa12.93□□□□□ -0.34
NCOA4-201ENST00000578454 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
NCOA4-201ENST00000578454 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
NCOA4-201ENST00000578454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
NCOA4-201ENST00000578454 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
NCOA4-201ENST00000578454 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
NCOA4-201ENST00000578454 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
NCOA4-201ENST00000578454 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
NCOA4-201ENST00000578454 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
NCOA4-201ENST00000578454 MAGI3Q5TCQ9 1506 aa12.86□□□□□ -0.35
NCOA4-201ENST00000578454 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
NCOA4-201ENST00000578454 ATP10BO94823 1461 aa12.85□□□□□ -0.35
NCOA4-201ENST00000578454 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
NCOA4-201ENST00000578454 UHRF1BP1LA0JNW5 1464 aa12.84□□□□□ -0.35
NCOA4-201ENST00000578454 RRBP1Q9P2E9 1410 aaKnown RBP12.84□□□□□ -0.35
NCOA4-201ENST00000578454 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
NCOA4-201ENST00000578454 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
NCOA4-201ENST00000578454 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
NCOA4-201ENST00000578454 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
NCOA4-201ENST00000578454 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
NCOA4-201ENST00000578454 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
NCOA4-201ENST00000578454 ZBTB22O15209 634 aa12.78□□□□□ -0.36
NCOA4-201ENST00000578454 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.36
NCOA4-201ENST00000578454 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.36
NCOA4-201ENST00000578454 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
NCOA4-201ENST00000578454 ADCY10Q96PN6 1610 aa12.77□□□□□ -0.37
NCOA4-201ENST00000578454 ZCCHC11Q5TAX3 1644 aaKnown RBP12.76□□□□□ -0.37
NCOA4-201ENST00000578454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
NCOA4-201ENST00000578454 KIF14Q15058 1648 aa12.74□□□□□ -0.37
NCOA4-201ENST00000578454 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
NCOA4-201ENST00000578454 MIA2Q96PC5 1412 aa12.74□□□□□ -0.37
NCOA4-201ENST00000578454 ITGAEP38570 1179 aa12.72□□□□□ -0.37
NCOA4-201ENST00000578454 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
NCOA4-201ENST00000578454 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
NCOA4-201ENST00000578454 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
NCOA4-201ENST00000578454 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
NCOA4-201ENST00000578454 ITSN2Q9NZM3 1697 aa12.7□□□□□ -0.38
NCOA4-201ENST00000578454 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
NCOA4-201ENST00000578454 TCOF1Q13428 1488 aaKnown RBP12.69□□□□□ -0.38
NCOA4-201ENST00000578454 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms