RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ARHGAP35Q9NRY4 1499 aa29.31■■■□□ 2.28
PRKCA-203ENST00000578063 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
PRKCA-203ENST00000578063 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
PRKCA-203ENST00000578063 EFCAB5A4FU69 1503 aa29.27■■■□□ 2.28
PRKCA-203ENST00000578063 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
PRKCA-203ENST00000578063 IQGAP2Q13576 1575 aa29.24■■■□□ 2.27
PRKCA-203ENST00000578063 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
PRKCA-203ENST00000578063 FBLN2P98095 1184 aa29.2■■■□□ 2.27
PRKCA-203ENST00000578063 NUP160Q12769 1436 aa29.19■■■□□ 2.26
PRKCA-203ENST00000578063 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
PRKCA-203ENST00000578063 SAMD9Q5K651 1589 aa29.15■■■□□ 2.26
PRKCA-203ENST00000578063 UGGT2Q9NYU1 1516 aa29.11■■■□□ 2.25
PRKCA-203ENST00000578063 CHD1O14646 1710 aa29.09■■■□□ 2.25
PRKCA-203ENST00000578063 FHOD3Q2V2M9 1422 aa29.06■■■□□ 2.24
PRKCA-203ENST00000578063 P3H3Q8IVL6 736 aa29.01■■■□□ 2.23
PRKCA-203ENST00000578063 FMN1Q68DA7 1419 aa28.99■■■□□ 2.23
PRKCA-203ENST00000578063 APLP2Q06481 763 aa28.95■■■□□ 2.23
PRKCA-203ENST00000578063 KIAA0556O60303 1618 aa28.94■■■□□ 2.22
PRKCA-203ENST00000578063 DISP1Q96F81 1524 aa28.93■■■□□ 2.22
PRKCA-203ENST00000578063 PCF11O94913 1555 aaKnown RBP28.9■■■□□ 2.22
PRKCA-203ENST00000578063 JPH4Q96JJ6 628 aa28.89■■■□□ 2.22
PRKCA-203ENST00000578063 FYCO1Q9BQS8 1478 aa28.89■■■□□ 2.22
PRKCA-203ENST00000578063 CASKIN1Q8WXD9 1431 aa28.89■■■□□ 2.21
PRKCA-203ENST00000578063 CARMIL2Q6F5E8 1435 aa28.87■■■□□ 2.21
PRKCA-203ENST00000578063 MAP3K1Q13233 1512 aa28.83■■■□□ 2.21
PRKCA-203ENST00000578063 PPARGC1BQ86YN6 1023 aaKnown RBP28.83■■■□□ 2.21
PRKCA-203ENST00000578063 CLASP1Q7Z460 1538 aa28.82■■■□□ 2.2
PRKCA-203ENST00000578063 SHROOM2Q13796 1616 aa28.81■■■□□ 2.2
PRKCA-203ENST00000578063 TRIM26Q12899 539 aaPredicted RBP28.8■■■□□ 2.2
PRKCA-203ENST00000578063 TIAM1Q13009 1591 aa28.76■■■□□ 2.19
PRKCA-203ENST00000578063 PRG4Q92954 1404 aaPredicted RBP28.75■■■□□ 2.19
PRKCA-203ENST00000578063 CFAP43Q8NDM7 1665 aa28.73■■■□□ 2.19
PRKCA-203ENST00000578063 HECW1Q76N89 1606 aa28.71■■■□□ 2.19
PRKCA-203ENST00000578063 ATP1B4Q9UN42 357 aaPredicted RBP28.69■■■□□ 2.18
PRKCA-203ENST00000578063 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
PRKCA-203ENST00000578063 PCGF6Q9BYE7 350 aa28.66■■■□□ 2.18
PRKCA-203ENST00000578063 CCDC18Q5T9S5 1454 aa28.65■■■□□ 2.18
PRKCA-203ENST00000578063 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
PRKCA-203ENST00000578063 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
PRKCA-203ENST00000578063 LRRC9Q6ZRR7 1453 aa28.62■■■□□ 2.17
PRKCA-203ENST00000578063 OSCARQ8IYS5 282 aa28.6■■■□□ 2.17
PRKCA-203ENST00000578063 LRRIQ1Q96JM4 1722 aa28.58■■■□□ 2.17
PRKCA-203ENST00000578063 EPRSP07814 1512 aaKnown RBP28.57■■■□□ 2.16
PRKCA-203ENST00000578063 PTPRGP23470 1445 aa28.56■■■□□ 2.16
PRKCA-203ENST00000578063 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
PRKCA-203ENST00000578063 PLB1Q6P1J6 1458 aa28.55■■■□□ 2.16
PRKCA-203ENST00000578063 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
PRKCA-203ENST00000578063 ABCA8O94911 1581 aa28.54■■■□□ 2.16
PRKCA-203ENST00000578063 MTUS2Q5JR59 1369 aa28.48■■■□□ 2.15
PRKCA-203ENST00000578063 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
PRKCA-203ENST00000578063 CDK13Q14004 1512 aaKnown RBP28.47■■■□□ 2.15
PRKCA-203ENST00000578063 UACAQ9BZF9 1416 aa28.42■■■□□ 2.14
PRKCA-203ENST00000578063 MAGI3Q5TCQ9 1506 aa28.38■■■□□ 2.13
PRKCA-203ENST00000578063 ARID3CA6NKF2 412 aa28.36■■■□□ 2.13
PRKCA-203ENST00000578063 CDK11AQ9UQ88 783 aaPredicted RBP28.36■■■□□ 2.13
PRKCA-203ENST00000578063 RRBP1Q9P2E9 1410 aaKnown RBP28.36■■■□□ 2.13
PRKCA-203ENST00000578063 ABCC2Q92887 1545 aa28.35■■■□□ 2.13
PRKCA-203ENST00000578063 SUPT6HQ7KZ85 1726 aaKnown RBP28.35■■■□□ 2.13
PRKCA-203ENST00000578063 PHLDB1Q86UU1 1377 aa28.32■■■□□ 2.12
PRKCA-203ENST00000578063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
PRKCA-203ENST00000578063 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
PRKCA-203ENST00000578063 UHRF1BP1LA0JNW5 1464 aa28.31■■■□□ 2.12
PRKCA-203ENST00000578063 ATP10BO94823 1461 aa28.31■■■□□ 2.12
PRKCA-203ENST00000578063 NCOA2Q15596 1464 aa28.31■■■□□ 2.12
PRKCA-203ENST00000578063 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
PRKCA-203ENST00000578063 TROQ12816 1431 aaPredicted RBP28.27■■■□□ 2.12
PRKCA-203ENST00000578063 CCNB3Q8WWL7 1395 aa28.27■■■□□ 2.12
PRKCA-203ENST00000578063 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.1
PRKCA-203ENST00000578063 ADCY10Q96PN6 1610 aa28.19■■■□□ 2.1
PRKCA-203ENST00000578063 PLEKHD1A6NEE1 506 aa28.18■■■□□ 2.1
PRKCA-203ENST00000578063 KDM5BQ9UGL1 1544 aa28.17■■■□□ 2.1
PRKCA-203ENST00000578063 FGD6Q6ZV73 1430 aa28.17■■■□□ 2.1
PRKCA-203ENST00000578063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.13■■■□□ 2.09
PRKCA-203ENST00000578063 KIF14Q15058 1648 aa28.12■■■□□ 2.09
PRKCA-203ENST00000578063 ZCCHC11Q5TAX3 1644 aaKnown RBP28.12■■■□□ 2.09
PRKCA-203ENST00000578063 MIA2Q96PC5 1412 aa28.09■■■□□ 2.09
PRKCA-203ENST00000578063 FAM50AQ14320 339 aaKnown RBP28.04■■■□□ 2.08
PRKCA-203ENST00000578063 PTPN23Q9H3S7 1636 aa28.03■■■□□ 2.08
PRKCA-203ENST00000578063 TCOF1Q13428 1488 aaKnown RBP28.02■■■□□ 2.08
PRKCA-203ENST00000578063 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
PRKCA-203ENST00000578063 ITSN2Q9NZM3 1697 aa28.02■■■□□ 2.08
PRKCA-203ENST00000578063 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
PRKCA-203ENST00000578063 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
PRKCA-203ENST00000578063 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
PRKCA-203ENST00000578063 GPATCH8Q9UKJ3 1502 aaKnown RBP27.98■■■□□ 2.07
PRKCA-203ENST00000578063 WDR7Q9Y4E6 1490 aa27.92■■■□□ 2.06
PRKCA-203ENST00000578063 ITGAEP38570 1179 aa27.91■■■□□ 2.06
PRKCA-203ENST00000578063 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
PRKCA-203ENST00000578063 CDC42BPAQ5VT25 1732 aa27.9■■■□□ 2.06
PRKCA-203ENST00000578063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.89■■■□□ 2.062e-7■■■□□ 19.1
PRKCA-203ENST00000578063 CFDP1Q9UEE9 299 aaPredicted RBP27.89■■■□□ 2.06
PRKCA-203ENST00000578063 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
PRKCA-203ENST00000578063 TTC37Q6PGP7 1564 aa27.86■■■□□ 2.05
PRKCA-203ENST00000578063 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
PRKCA-203ENST00000578063 PREX2Q70Z35 1606 aa27.85■■■□□ 2.05
PRKCA-203ENST00000578063 CAMSAP2Q08AD1 1489 aa27.84■■■□□ 2.05
PRKCA-203ENST00000578063 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
PRKCA-203ENST00000578063 MYO5CQ9NQX4 1742 aa27.79■■■□□ 2.04
PRKCA-203ENST00000578063 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
PRKCA-203ENST00000578063 PTPRKQ15262 1439 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms