RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
MKS1-206ENST00000577824 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
MKS1-206ENST00000577824 SHROOM2Q13796 1616 aa21■□□□□ 0.95
MKS1-206ENST00000577824 IQGAP2Q13576 1575 aa20.96■□□□□ 0.95
MKS1-206ENST00000577824 UGGT2Q9NYU1 1516 aa20.88■□□□□ 0.93
MKS1-206ENST00000577824 ARHGEF11O15085 1522 aa20.84■□□□□ 0.93
MKS1-206ENST00000577824 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
MKS1-206ENST00000577824 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
MKS1-206ENST00000577824 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
MKS1-206ENST00000577824 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
MKS1-206ENST00000577824 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
MKS1-206ENST00000577824 DISP1Q96F81 1524 aa20.79■□□□□ 0.92
MKS1-206ENST00000577824 SAMD9Q5K651 1589 aa20.79■□□□□ 0.92
MKS1-206ENST00000577824 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
MKS1-206ENST00000577824 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
MKS1-206ENST00000577824 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
MKS1-206ENST00000577824 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
MKS1-206ENST00000577824 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
MKS1-206ENST00000577824 CARMIL2Q6F5E8 1435 aa20.72■□□□□ 0.91
MKS1-206ENST00000577824 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
MKS1-206ENST00000577824 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
MKS1-206ENST00000577824 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
MKS1-206ENST00000577824 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.89
MKS1-206ENST00000577824 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
MKS1-206ENST00000577824 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
MKS1-206ENST00000577824 CLIP1P30622 1438 aa20.59■□□□□ 0.89
MKS1-206ENST00000577824 PTPRGP23470 1445 aa20.56■□□□□ 0.88
MKS1-206ENST00000577824 FHOD3Q2V2M9 1422 aa20.56■□□□□ 0.88
MKS1-206ENST00000577824 ABCA8O94911 1581 aa20.53■□□□□ 0.88
MKS1-206ENST00000577824 UHRF1BP1LA0JNW5 1464 aa20.52■□□□□ 0.88
MKS1-206ENST00000577824 ADCY10Q96PN6 1610 aa20.51■□□□□ 0.87
MKS1-206ENST00000577824 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
MKS1-206ENST00000577824 FMN1Q68DA7 1419 aa20.49■□□□□ 0.87
MKS1-206ENST00000577824 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
MKS1-206ENST00000577824 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
MKS1-206ENST00000577824 RAPGEF6Q8TEU7 1601 aa20.46■□□□□ 0.87
MKS1-206ENST00000577824 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
MKS1-206ENST00000577824 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
MKS1-206ENST00000577824 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
MKS1-206ENST00000577824 KDM5BQ9UGL1 1544 aa20.41■□□□□ 0.86
MKS1-206ENST00000577824 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
MKS1-206ENST00000577824 HECW1Q76N89 1606 aa20.39■□□□□ 0.86
MKS1-206ENST00000577824 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.85
MKS1-206ENST00000577824 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.85
MKS1-206ENST00000577824 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
MKS1-206ENST00000577824 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
MKS1-206ENST00000577824 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
MKS1-206ENST00000577824 MAPKBP1O60336 1514 aa20.35■□□□□ 0.85
MKS1-206ENST00000577824 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.85
MKS1-206ENST00000577824 LRRIQ1Q96JM4 1722 aa20.3■□□□□ 0.84
MKS1-206ENST00000577824 ATP10BO94823 1461 aa20.3■□□□□ 0.84
MKS1-206ENST00000577824 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
MKS1-206ENST00000577824 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
MKS1-206ENST00000577824 CDK13Q14004 1512 aaKnown RBP20.24■□□□□ 0.83
MKS1-206ENST00000577824 CFAP43Q8NDM7 1665 aa20.22■□□□□ 0.83
MKS1-206ENST00000577824 ASXL2Q76L83 1435 aa20.21■□□□□ 0.83
MKS1-206ENST00000577824 WDR7Q9Y4E6 1490 aa20.2■□□□□ 0.82
MKS1-206ENST00000577824 NPM1P06748 294 aaKnown RBP eCLIP20.2■□□□□ 0.82
MKS1-206ENST00000577824 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
MKS1-206ENST00000577824 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
MKS1-206ENST00000577824 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
MKS1-206ENST00000577824 ABCC10Q5T3U5 1492 aa20.15■□□□□ 0.82
MKS1-206ENST00000577824 GLI2P10070 1586 aa20.13■□□□□ 0.81
MKS1-206ENST00000577824 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
MKS1-206ENST00000577824 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
MKS1-206ENST00000577824 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
MKS1-206ENST00000577824 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
MKS1-206ENST00000577824 EHBP1L1Q8N3D4 1523 aa20.09■□□□□ 0.81
MKS1-206ENST00000577824 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.81
MKS1-206ENST00000577824 KIF14Q15058 1648 aa20.07■□□□□ 0.8
MKS1-206ENST00000577824 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
MKS1-206ENST00000577824 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
MKS1-206ENST00000577824 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
MKS1-206ENST00000577824 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
MKS1-206ENST00000577824 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
MKS1-206ENST00000577824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
MKS1-206ENST00000577824 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
MKS1-206ENST00000577824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.8
MKS1-206ENST00000577824 TTC37Q6PGP7 1564 aa20.01■□□□□ 0.79
MKS1-206ENST00000577824 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
MKS1-206ENST00000577824 SUPT6HQ7KZ85 1726 aaKnown RBP19.98■□□□□ 0.79
MKS1-206ENST00000577824 PPRC1Q5VV67 1664 aaKnown RBP19.97■□□□□ 0.79
MKS1-206ENST00000577824 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
MKS1-206ENST00000577824 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
MKS1-206ENST00000577824 PREX2Q70Z35 1606 aa19.93■□□□□ 0.78
MKS1-206ENST00000577824 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
MKS1-206ENST00000577824 APLP2Q06481 763 aa19.92■□□□□ 0.78
MKS1-206ENST00000577824 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
MKS1-206ENST00000577824 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
MKS1-206ENST00000577824 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
MKS1-206ENST00000577824 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
MKS1-206ENST00000577824 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
MKS1-206ENST00000577824 PLCH2O75038 1416 aa19.89■□□□□ 0.77
MKS1-206ENST00000577824 ITSN2Q9NZM3 1697 aa19.89■□□□□ 0.77
MKS1-206ENST00000577824 TEX14Q8IWB6 1497 aa19.88■□□□□ 0.77
MKS1-206ENST00000577824 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
MKS1-206ENST00000577824 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
MKS1-206ENST00000577824 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
MKS1-206ENST00000577824 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
MKS1-206ENST00000577824 NEO1Q92859 1461 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms