RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
SMARCE1-212ENST00000577721 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
SMARCE1-212ENST00000577721 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
SMARCE1-212ENST00000577721 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
SMARCE1-212ENST00000577721 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
SMARCE1-212ENST00000577721 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-212ENST00000577721 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
SMARCE1-212ENST00000577721 CLCN6P51797 869 aa13.15□□□□□ -0.3
SMARCE1-212ENST00000577721 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
SMARCE1-212ENST00000577721 CD44P16070 742 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-212ENST00000577721 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
SMARCE1-212ENST00000577721 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-212ENST00000577721 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.31
SMARCE1-212ENST00000577721 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
SMARCE1-212ENST00000577721 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SMARCE1-212ENST00000577721 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
SMARCE1-212ENST00000577721 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
SMARCE1-212ENST00000577721 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
SMARCE1-212ENST00000577721 WDR62O43379 1518 aa12.99□□□□□ -0.33
SMARCE1-212ENST00000577721 WIZO95785 1651 aa12.99□□□□□ -0.33
SMARCE1-212ENST00000577721 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
SMARCE1-212ENST00000577721 CFTRP13569 1480 aa12.91□□□□□ -0.34
SMARCE1-212ENST00000577721 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-212ENST00000577721 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-212ENST00000577721 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-212ENST00000577721 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
SMARCE1-212ENST00000577721 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-212ENST00000577721 POTEMA6NI47 508 aa12.81□□□□□ -0.36
SMARCE1-212ENST00000577721 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
SMARCE1-212ENST00000577721 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
SMARCE1-212ENST00000577721 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
SMARCE1-212ENST00000577721 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-212ENST00000577721 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
SMARCE1-212ENST00000577721 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
SMARCE1-212ENST00000577721 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-212ENST00000577721 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
SMARCE1-212ENST00000577721 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
SMARCE1-212ENST00000577721 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
SMARCE1-212ENST00000577721 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
SMARCE1-212ENST00000577721 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
SMARCE1-212ENST00000577721 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-212ENST00000577721 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
SMARCE1-212ENST00000577721 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
SMARCE1-212ENST00000577721 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
SMARCE1-212ENST00000577721 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.385e-8■■■□□ 18.8
SMARCE1-212ENST00000577721 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
SMARCE1-212ENST00000577721 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
SMARCE1-212ENST00000577721 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
SMARCE1-212ENST00000577721 EIF4G3O43432 1585 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-212ENST00000577721 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
SMARCE1-212ENST00000577721 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-212ENST00000577721 SOGA1O94964 1423 aa12.57□□□□□ -0.4
SMARCE1-212ENST00000577721 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-212ENST00000577721 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
SMARCE1-212ENST00000577721 PHF12Q96QT6 1004 aa12.55□□□□□ -0.4
SMARCE1-212ENST00000577721 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-212ENST00000577721 ARAP1Q96P48 1450 aa12.53□□□□□ -0.4
SMARCE1-212ENST00000577721 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.4
SMARCE1-212ENST00000577721 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
SMARCE1-212ENST00000577721 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-212ENST00000577721 CHD1O14646 1710 aa12.49□□□□□ -0.41
SMARCE1-212ENST00000577721 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
SMARCE1-212ENST00000577721 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
SMARCE1-212ENST00000577721 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMARCE1-212ENST00000577721 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
SMARCE1-212ENST00000577721 C7P10643 843 aa12.46□□□□□ -0.41
SMARCE1-212ENST00000577721 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.42
SMARCE1-212ENST00000577721 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
SMARCE1-212ENST00000577721 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-212ENST00000577721 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-212ENST00000577721 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-212ENST00000577721 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
SMARCE1-212ENST00000577721 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
SMARCE1-212ENST00000577721 CUX1P39880 1505 aa12.39□□□□□ -0.43
SMARCE1-212ENST00000577721 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
SMARCE1-212ENST00000577721 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
SMARCE1-212ENST00000577721 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-212ENST00000577721 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
SMARCE1-212ENST00000577721 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
SMARCE1-212ENST00000577721 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-212ENST00000577721 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
SMARCE1-212ENST00000577721 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
SMARCE1-212ENST00000577721 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-212ENST00000577721 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
SMARCE1-212ENST00000577721 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
SMARCE1-212ENST00000577721 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-212ENST00000577721 GRIN2AQ12879 1464 aa12.24□□□□□ -0.45
SMARCE1-212ENST00000577721 PBRM1Q86U86 1689 aa12.23□□□□□ -0.45
SMARCE1-212ENST00000577721 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
SMARCE1-212ENST00000577721 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-212ENST00000577721 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
SMARCE1-212ENST00000577721 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
SMARCE1-212ENST00000577721 ABCA5Q8WWZ7 1642 aa12.21□□□□□ -0.46
SMARCE1-212ENST00000577721 NUP160Q12769 1436 aa12.2□□□□□ -0.46
SMARCE1-212ENST00000577721 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
SMARCE1-212ENST00000577721 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
SMARCE1-212ENST00000577721 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-212ENST00000577721 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
SMARCE1-212ENST00000577721 PRG4Q92954 1404 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-212ENST00000577721 FAM69CQ0P6D2 419 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms