RNA–Protein interactions for RNA: ENST00000576370.5

COX11-209, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 1 (best)

Gene COX11, Length 2,663 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-209ENST00000576370 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
COX11-209ENST00000576370 FHOD3Q2V2M9 1422 aa16.76■□□□□ 0.27
COX11-209ENST00000576370 RRBP1Q9P2E9 1410 aaKnown RBP16.76■□□□□ 0.27
COX11-209ENST00000576370 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
COX11-209ENST00000576370 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
COX11-209ENST00000576370 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
COX11-209ENST00000576370 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
COX11-209ENST00000576370 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
COX11-209ENST00000576370 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
COX11-209ENST00000576370 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
COX11-209ENST00000576370 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
COX11-209ENST00000576370 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
COX11-209ENST00000576370 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
COX11-209ENST00000576370 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
COX11-209ENST00000576370 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
COX11-209ENST00000576370 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
COX11-209ENST00000576370 PCF11O94913 1555 aaKnown RBP16.61■□□□□ 0.25
COX11-209ENST00000576370 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
COX11-209ENST00000576370 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
COX11-209ENST00000576370 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
COX11-209ENST00000576370 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
COX11-209ENST00000576370 HIRIP3Q9BW71 556 aaPredicted RBP16.53■□□□□ 0.24
COX11-209ENST00000576370 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
COX11-209ENST00000576370 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.247e-6■■□□□ 13.1
COX11-209ENST00000576370 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
COX11-209ENST00000576370 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.24
COX11-209ENST00000576370 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
COX11-209ENST00000576370 MAPKBP1O60336 1514 aa16.48■□□□□ 0.23
COX11-209ENST00000576370 FYCO1Q9BQS8 1478 aa16.48■□□□□ 0.23
COX11-209ENST00000576370 CUL7Q14999 1698 aa16.48■□□□□ 0.23
COX11-209ENST00000576370 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
COX11-209ENST00000576370 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.23
COX11-209ENST00000576370 EFCAB5A4FU69 1503 aa16.45■□□□□ 0.22
COX11-209ENST00000576370 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
COX11-209ENST00000576370 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
COX11-209ENST00000576370 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
COX11-209ENST00000576370 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
COX11-209ENST00000576370 SNAPC4Q5SXM2 1469 aa16.43■□□□□ 0.22
COX11-209ENST00000576370 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
COX11-209ENST00000576370 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
COX11-209ENST00000576370 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
COX11-209ENST00000576370 RRP7BPQ9NSQ0 103 aa16.42■□□□□ 0.22
COX11-209ENST00000576370 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
COX11-209ENST00000576370 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
COX11-209ENST00000576370 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
COX11-209ENST00000576370 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
COX11-209ENST00000576370 FBLN2P98095 1184 aa16.36■□□□□ 0.21
COX11-209ENST00000576370 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
COX11-209ENST00000576370 PPP1R15AO75807 674 aaPredicted RBP16.33■□□□□ 0.2
COX11-209ENST00000576370 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
COX11-209ENST00000576370 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.2
COX11-209ENST00000576370 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
COX11-209ENST00000576370 MAGI3Q5TCQ9 1506 aa16.31■□□□□ 0.2
COX11-209ENST00000576370 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
COX11-209ENST00000576370 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
COX11-209ENST00000576370 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
COX11-209ENST00000576370 CDK13Q14004 1512 aaKnown RBP16.28■□□□□ 0.2
COX11-209ENST00000576370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
COX11-209ENST00000576370 FOXD1Q16676 465 aa16.28■□□□□ 0.2
COX11-209ENST00000576370 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
COX11-209ENST00000576370 NAIPQ13075 1403 aa16.26■□□□□ 0.19
COX11-209ENST00000576370 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
COX11-209ENST00000576370 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
COX11-209ENST00000576370 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
COX11-209ENST00000576370 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
COX11-209ENST00000576370 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
COX11-209ENST00000576370 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
COX11-209ENST00000576370 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
COX11-209ENST00000576370 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.18
COX11-209ENST00000576370 UACAQ9BZF9 1416 aa16.21■□□□□ 0.18
COX11-209ENST00000576370 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
COX11-209ENST00000576370 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
COX11-209ENST00000576370 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
COX11-209ENST00000576370 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
COX11-209ENST00000576370 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
COX11-209ENST00000576370 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
COX11-209ENST00000576370 IFT140Q96RY7 1462 aa16.17■□□□□ 0.18
COX11-209ENST00000576370 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
COX11-209ENST00000576370 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
COX11-209ENST00000576370 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
COX11-209ENST00000576370 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
COX11-209ENST00000576370 KDM6BO15054 1643 aa16.13■□□□□ 0.17
COX11-209ENST00000576370 ARHGEF11O15085 1522 aa16.12■□□□□ 0.17
COX11-209ENST00000576370 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
COX11-209ENST00000576370 WDR62O43379 1518 aa16.11■□□□□ 0.17
COX11-209ENST00000576370 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
COX11-209ENST00000576370 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
COX11-209ENST00000576370 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
COX11-209ENST00000576370 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
COX11-209ENST00000576370 ANP32CO43423 234 aa16.1■□□□□ 0.17
COX11-209ENST00000576370 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
COX11-209ENST00000576370 CDK11AQ9UQ88 783 aaPredicted RBP16.09■□□□□ 0.17
COX11-209ENST00000576370 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
COX11-209ENST00000576370 CFDP1Q9UEE9 299 aaPredicted RBP16.08■□□□□ 0.16
COX11-209ENST00000576370 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
COX11-209ENST00000576370 PLB1Q6P1J6 1458 aa16.08■□□□□ 0.16
COX11-209ENST00000576370 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
COX11-209ENST00000576370 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
COX11-209ENST00000576370 BCANQ96GW7 911 aa16.06■□□□□ 0.16
COX11-209ENST00000576370 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms