RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
RAB40B-210ENST00000576148 PBRM1Q86U86 1689 aa13.83□□□□□ -0.2
RAB40B-210ENST00000576148 SHROOM2Q13796 1616 aa13.82□□□□□ -0.2
RAB40B-210ENST00000576148 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
RAB40B-210ENST00000576148 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
RAB40B-210ENST00000576148 JPH4Q96JJ6 628 aa13.81□□□□□ -0.2
RAB40B-210ENST00000576148 CUX1P39880 1505 aa13.76□□□□□ -0.21
RAB40B-210ENST00000576148 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
RAB40B-210ENST00000576148 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
RAB40B-210ENST00000576148 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
RAB40B-210ENST00000576148 ADCY10Q96PN6 1610 aa13.71□□□□□ -0.22
RAB40B-210ENST00000576148 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
RAB40B-210ENST00000576148 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
RAB40B-210ENST00000576148 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-210ENST00000576148 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
RAB40B-210ENST00000576148 GLI2P10070 1586 aa13.6□□□□□ -0.23
RAB40B-210ENST00000576148 PLB1Q6P1J6 1458 aa13.6□□□□□ -0.23
RAB40B-210ENST00000576148 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
RAB40B-210ENST00000576148 ASXL2Q76L83 1435 aa13.58□□□□□ -0.24
RAB40B-210ENST00000576148 TEX14Q8IWB6 1497 aa13.58□□□□□ -0.24
RAB40B-210ENST00000576148 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
RAB40B-210ENST00000576148 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-210ENST00000576148 PTPRGP23470 1445 aa13.54□□□□□ -0.24
RAB40B-210ENST00000576148 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
RAB40B-210ENST00000576148 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
RAB40B-210ENST00000576148 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
RAB40B-210ENST00000576148 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
RAB40B-210ENST00000576148 PTPRMP28827 1452 aa13.5□□□□□ -0.25
RAB40B-210ENST00000576148 PCF11O94913 1555 aaKnown RBP13.48□□□□□ -0.25
RAB40B-210ENST00000576148 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
RAB40B-210ENST00000576148 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.26
RAB40B-210ENST00000576148 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
RAB40B-210ENST00000576148 HSPA2P54652 639 aa13.44□□□□□ -0.26
RAB40B-210ENST00000576148 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
RAB40B-210ENST00000576148 KIF21BO75037 1637 aa13.4□□□□□ -0.26
RAB40B-210ENST00000576148 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
RAB40B-210ENST00000576148 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
RAB40B-210ENST00000576148 UACAQ9BZF9 1416 aa13.38□□□□□ -0.27
RAB40B-210ENST00000576148 CUL7Q14999 1698 aa13.37□□□□□ -0.27
RAB40B-210ENST00000576148 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
RAB40B-210ENST00000576148 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
RAB40B-210ENST00000576148 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
RAB40B-210ENST00000576148 MAGI3Q5TCQ9 1506 aa13.34□□□□□ -0.27
RAB40B-210ENST00000576148 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
RAB40B-210ENST00000576148 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
RAB40B-210ENST00000576148 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
RAB40B-210ENST00000576148 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
RAB40B-210ENST00000576148 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
RAB40B-210ENST00000576148 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
RAB40B-210ENST00000576148 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
RAB40B-210ENST00000576148 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
RAB40B-210ENST00000576148 ZCCHC11Q5TAX3 1644 aaKnown RBP13.25□□□□□ -0.29
RAB40B-210ENST00000576148 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
RAB40B-210ENST00000576148 IGF1RP08069 1367 aa13.22□□□□□ -0.29
RAB40B-210ENST00000576148 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
RAB40B-210ENST00000576148 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
RAB40B-210ENST00000576148 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
RAB40B-210ENST00000576148 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
RAB40B-210ENST00000576148 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
RAB40B-210ENST00000576148 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
RAB40B-210ENST00000576148 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
RAB40B-210ENST00000576148 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
RAB40B-210ENST00000576148 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
RAB40B-210ENST00000576148 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
RAB40B-210ENST00000576148 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
RAB40B-210ENST00000576148 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
RAB40B-210ENST00000576148 PTPRTO14522 1441 aa13.08□□□□□ -0.32
RAB40B-210ENST00000576148 MLECQ14165 292 aa13.08□□□□□ -0.32
RAB40B-210ENST00000576148 FANCAO15360 1455 aa13.06□□□□□ -0.32
RAB40B-210ENST00000576148 NEO1Q92859 1461 aa13.05□□□□□ -0.32
RAB40B-210ENST00000576148 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
RAB40B-210ENST00000576148 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
RAB40B-210ENST00000576148 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
RAB40B-210ENST00000576148 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
RAB40B-210ENST00000576148 AKNAQ7Z591 1439 aa13.03□□□□□ -0.32
RAB40B-210ENST00000576148 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
RAB40B-210ENST00000576148 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.33
RAB40B-210ENST00000576148 ARHGEF40Q8TER5 1519 aa13.02□□□□□ -0.33
RAB40B-210ENST00000576148 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
RAB40B-210ENST00000576148 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
RAB40B-210ENST00000576148 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
RAB40B-210ENST00000576148 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
RAB40B-210ENST00000576148 TTC37Q6PGP7 1564 aa12.99□□□□□ -0.33
RAB40B-210ENST00000576148 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
RAB40B-210ENST00000576148 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
RAB40B-210ENST00000576148 HSPA1LP34931 641 aa12.98□□□□□ -0.33
RAB40B-210ENST00000576148 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
RAB40B-210ENST00000576148 ABCA8O94911 1581 aa12.97□□□□□ -0.33
RAB40B-210ENST00000576148 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.33
RAB40B-210ENST00000576148 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
RAB40B-210ENST00000576148 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
RAB40B-210ENST00000576148 FER1L4A9Z1Z3 1794 aa12.94□□□□□ -0.34
RAB40B-210ENST00000576148 ZFYVE16Q7Z3T8 1539 aa12.92□□□□□ -0.34
RAB40B-210ENST00000576148 ATP10BO94823 1461 aa12.91□□□□□ -0.34
RAB40B-210ENST00000576148 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
RAB40B-210ENST00000576148 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
RAB40B-210ENST00000576148 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
RAB40B-210ENST00000576148 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
RAB40B-210ENST00000576148 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
RAB40B-210ENST00000576148 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms