RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PRXQ9BXM0 1461 aa21.18■□□□□ 0.98
TRAPPC1-206ENST00000573989 KIAA0586Q9BVV6 1533 aa21.18■□□□□ 0.98
TRAPPC1-206ENST00000573989 SHROOM2Q13796 1616 aa21.16■□□□□ 0.98
TRAPPC1-206ENST00000573989 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC1-206ENST00000573989 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
TRAPPC1-206ENST00000573989 CTTNBP2Q8WZ74 1663 aa21.1■□□□□ 0.97
TRAPPC1-206ENST00000573989 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
TRAPPC1-206ENST00000573989 PRG4Q92954 1404 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC1-206ENST00000573989 KIF21BO75037 1637 aa21.05■□□□□ 0.96
TRAPPC1-206ENST00000573989 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
TRAPPC1-206ENST00000573989 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
TRAPPC1-206ENST00000573989 ERCC6L2Q5T890 1561 aa21.01■□□□□ 0.95
TRAPPC1-206ENST00000573989 CARMIL2Q6F5E8 1435 aa21■□□□□ 0.95
TRAPPC1-206ENST00000573989 UGGT2Q9NYU1 1516 aa20.96■□□□□ 0.95
TRAPPC1-206ENST00000573989 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
TRAPPC1-206ENST00000573989 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
TRAPPC1-206ENST00000573989 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
TRAPPC1-206ENST00000573989 KIAA0556O60303 1618 aa20.88■□□□□ 0.93
TRAPPC1-206ENST00000573989 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
TRAPPC1-206ENST00000573989 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
TRAPPC1-206ENST00000573989 PTPRGP23470 1445 aa20.85■□□□□ 0.93
TRAPPC1-206ENST00000573989 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC1-206ENST00000573989 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
TRAPPC1-206ENST00000573989 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC1-206ENST00000573989 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
TRAPPC1-206ENST00000573989 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRAPPC1-206ENST00000573989 ADCY10Q96PN6 1610 aa20.72■□□□□ 0.91
TRAPPC1-206ENST00000573989 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
TRAPPC1-206ENST00000573989 P3H3Q8IVL6 736 aa20.71■□□□□ 0.91
TRAPPC1-206ENST00000573989 UHRF1BP1LA0JNW5 1464 aa20.69■□□□□ 0.9
TRAPPC1-206ENST00000573989 ABCC2Q92887 1545 aa20.68■□□□□ 0.9
TRAPPC1-206ENST00000573989 FHOD3Q2V2M9 1422 aa20.63■□□□□ 0.89
TRAPPC1-206ENST00000573989 ABCA8O94911 1581 aa20.62■□□□□ 0.89
TRAPPC1-206ENST00000573989 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
TRAPPC1-206ENST00000573989 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC1-206ENST00000573989 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
TRAPPC1-206ENST00000573989 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
TRAPPC1-206ENST00000573989 RAPGEF6Q8TEU7 1601 aa20.58■□□□□ 0.89
TRAPPC1-206ENST00000573989 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.88
TRAPPC1-206ENST00000573989 CLIP1P30622 1438 aa20.56■□□□□ 0.88
TRAPPC1-206ENST00000573989 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
TRAPPC1-206ENST00000573989 ZCCHC11Q5TAX3 1644 aaKnown RBP20.55■□□□□ 0.88
TRAPPC1-206ENST00000573989 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
TRAPPC1-206ENST00000573989 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
TRAPPC1-206ENST00000573989 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
TRAPPC1-206ENST00000573989 ABCC10Q5T3U5 1492 aa20.47■□□□□ 0.87
TRAPPC1-206ENST00000573989 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
TRAPPC1-206ENST00000573989 HECW1Q76N89 1606 aa20.45■□□□□ 0.87
TRAPPC1-206ENST00000573989 NUP153P49790 1475 aaKnown RBP20.45■□□□□ 0.86
TRAPPC1-206ENST00000573989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC1-206ENST00000573989 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
TRAPPC1-206ENST00000573989 ATP10BO94823 1461 aa20.44■□□□□ 0.86
TRAPPC1-206ENST00000573989 DIP2BQ9P265 1576 aa20.43■□□□□ 0.86
TRAPPC1-206ENST00000573989 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
TRAPPC1-206ENST00000573989 FAM69CQ0P6D2 419 aa20.43■□□□□ 0.86
TRAPPC1-206ENST00000573989 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-206ENST00000573989 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
TRAPPC1-206ENST00000573989 CASKIN1Q8WXD9 1431 aa20.38■□□□□ 0.85
TRAPPC1-206ENST00000573989 GLI2P10070 1586 aa20.37■□□□□ 0.85
TRAPPC1-206ENST00000573989 EPRSP07814 1512 aaKnown RBP20.37■□□□□ 0.85
TRAPPC1-206ENST00000573989 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
TRAPPC1-206ENST00000573989 FYCO1Q9BQS8 1478 aa20.36■□□□□ 0.85
TRAPPC1-206ENST00000573989 PLEKHD1A6NEE1 506 aa20.35■□□□□ 0.85
TRAPPC1-206ENST00000573989 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC1-206ENST00000573989 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.85
TRAPPC1-206ENST00000573989 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
TRAPPC1-206ENST00000573989 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
TRAPPC1-206ENST00000573989 TSPOAP1O95153 1857 aa20.31■□□□□ 0.84
TRAPPC1-206ENST00000573989 LRRIQ1Q96JM4 1722 aa20.29■□□□□ 0.84
TRAPPC1-206ENST00000573989 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
TRAPPC1-206ENST00000573989 MAP3K4Q9Y6R4 1608 aa20.27■□□□□ 0.84
TRAPPC1-206ENST00000573989 VPS8Q8N3P4 1428 aa20.24■□□□□ 0.83
TRAPPC1-206ENST00000573989 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
TRAPPC1-206ENST00000573989 ABCA9Q8IUA7 1624 aa20.23■□□□□ 0.83
TRAPPC1-206ENST00000573989 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
TRAPPC1-206ENST00000573989 TROQ12816 1431 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC1-206ENST00000573989 PPRC1Q5VV67 1664 aaKnown RBP20.19■□□□□ 0.82
TRAPPC1-206ENST00000573989 MAGI3Q5TCQ9 1506 aa20.17■□□□□ 0.82
TRAPPC1-206ENST00000573989 KIF14Q15058 1648 aa20.17■□□□□ 0.82
TRAPPC1-206ENST00000573989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRAPPC1-206ENST00000573989 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
TRAPPC1-206ENST00000573989 APLP2Q06481 763 aa20.11■□□□□ 0.81
TRAPPC1-206ENST00000573989 KDM6BO15054 1643 aa20.11■□□□□ 0.81
TRAPPC1-206ENST00000573989 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
TRAPPC1-206ENST00000573989 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
TRAPPC1-206ENST00000573989 TIAM1Q13009 1591 aa20.09■□□□□ 0.81
TRAPPC1-206ENST00000573989 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.81
TRAPPC1-206ENST00000573989 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.81
TRAPPC1-206ENST00000573989 EHBP1L1Q8N3D4 1523 aa20.08■□□□□ 0.81
TRAPPC1-206ENST00000573989 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
TRAPPC1-206ENST00000573989 NEO1Q92859 1461 aa20.06■□□□□ 0.8
TRAPPC1-206ENST00000573989 PLCH2O75038 1416 aa20.04■□□□□ 0.8
TRAPPC1-206ENST00000573989 ARAP3Q8WWN8 1544 aa20.04■□□□□ 0.8
TRAPPC1-206ENST00000573989 FANCAO15360 1455 aa20.03■□□□□ 0.8
TRAPPC1-206ENST00000573989 SUPT6HQ7KZ85 1726 aaKnown RBP20.02■□□□□ 0.79
TRAPPC1-206ENST00000573989 EFCAB2Q5VUJ9 269 aa20■□□□□ 0.79
TRAPPC1-206ENST00000573989 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
TRAPPC1-206ENST00000573989 PREX2Q70Z35 1606 aa19.99■□□□□ 0.79
TRAPPC1-206ENST00000573989 ARHGAP5Q13017 1502 aa19.99■□□□□ 0.79
TRAPPC1-206ENST00000573989 CDC42BPAQ5VT25 1732 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms