RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 JPH4Q96JJ6 628 aa28.64■■■□□ 2.18
LITAF-212ENST00000573332 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
LITAF-212ENST00000573332 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
LITAF-212ENST00000573332 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
LITAF-212ENST00000573332 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
LITAF-212ENST00000573332 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
LITAF-212ENST00000573332 KIF21BO75037 1637 aa28.52■■■□□ 2.16
LITAF-212ENST00000573332 IQGAP2Q13576 1575 aa28.51■■■□□ 2.15
LITAF-212ENST00000573332 ARAP1Q96P48 1450 aa28.49■■■□□ 2.15
LITAF-212ENST00000573332 ERCC6L2Q5T890 1561 aa28.47■■■□□ 2.15
LITAF-212ENST00000573332 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
LITAF-212ENST00000573332 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
LITAF-212ENST00000573332 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
LITAF-212ENST00000573332 GOLGA3Q08378 1498 aa28.39■■■□□ 2.13
LITAF-212ENST00000573332 CARMIL2Q6F5E8 1435 aa28.38■■■□□ 2.13
LITAF-212ENST00000573332 DISP1Q96F81 1524 aa28.33■■■□□ 2.13
LITAF-212ENST00000573332 TNIKQ9UKE5 1360 aa28.28■■■□□ 2.12
LITAF-212ENST00000573332 UBTFP17480 764 aaKnown RBP28.28■■■□□ 2.12
LITAF-212ENST00000573332 KIAA0556O60303 1618 aa28.24■■■□□ 2.11
LITAF-212ENST00000573332 PTPRGP23470 1445 aa28.24■■■□□ 2.11
LITAF-212ENST00000573332 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
LITAF-212ENST00000573332 SAMD9Q5K651 1589 aa28.15■■■□□ 2.1
LITAF-212ENST00000573332 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
LITAF-212ENST00000573332 TTBK1Q5TCY1 1321 aaPredicted RBP28.07■■■□□ 2.08
LITAF-212ENST00000573332 RANGAP1P46060 587 aaPredicted RBP28.06■■■□□ 2.08
LITAF-212ENST00000573332 P3H3Q8IVL6 736 aa28.06■■■□□ 2.08
LITAF-212ENST00000573332 UACAQ9BZF9 1416 aa28.06■■■□□ 2.08
LITAF-212ENST00000573332 UHRF1BP1LA0JNW5 1464 aa28.04■■■□□ 2.08
LITAF-212ENST00000573332 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
LITAF-212ENST00000573332 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
LITAF-212ENST00000573332 FHOD3Q2V2M9 1422 aa27.98■■■□□ 2.07
LITAF-212ENST00000573332 ABCC2Q92887 1545 aa27.97■■■□□ 2.07
LITAF-212ENST00000573332 NPM1P06748 294 aaKnown RBP eCLIP27.96■■■□□ 2.07
LITAF-212ENST00000573332 PLB1Q6P1J6 1458 aa27.95■■■□□ 2.07
LITAF-212ENST00000573332 LOC105371045A0A1W2PR82 267 aa27.95■■■□□ 2.06
LITAF-212ENST00000573332 ABCA8O94911 1581 aa27.94■■■□□ 2.06
LITAF-212ENST00000573332 KDM5BQ9UGL1 1544 aa27.89■■■□□ 2.06
LITAF-212ENST00000573332 CLIP1P30622 1438 aa27.88■■■□□ 2.05
LITAF-212ENST00000573332 MAPKBP1O60336 1514 aa27.86■■■□□ 2.05
LITAF-212ENST00000573332 FMN1Q68DA7 1419 aa27.84■■■□□ 2.05
LITAF-212ENST00000573332 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
LITAF-212ENST00000573332 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
LITAF-212ENST00000573332 NUP153P49790 1475 aaKnown RBP27.75■■■□□ 2.03
LITAF-212ENST00000573332 ZCCHC11Q5TAX3 1644 aaKnown RBP27.74■■■□□ 2.03
LITAF-212ENST00000573332 TRHP20396 242 aaPredicted RBP27.74■■■□□ 2.03
LITAF-212ENST00000573332 ATP10BO94823 1461 aa27.74■■■□□ 2.03
LITAF-212ENST00000573332 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
LITAF-212ENST00000573332 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.03
LITAF-212ENST00000573332 CASKIN1Q8WXD9 1431 aa27.65■■■□□ 2.02
LITAF-212ENST00000573332 WDR7Q9Y4E6 1490 aa27.64■■■□□ 2.01
LITAF-212ENST00000573332 ARID3CA6NKF2 412 aa27.63■■■□□ 2.01
LITAF-212ENST00000573332 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
LITAF-212ENST00000573332 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
LITAF-212ENST00000573332 DIP2BQ9P265 1576 aa27.61■■■□□ 2.01
LITAF-212ENST00000573332 EPRSP07814 1512 aaKnown RBP27.59■■■□□ 2.01
LITAF-212ENST00000573332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.59■■■□□ 2.01
LITAF-212ENST00000573332 HNRNPUL2Q1KMD3 747 aaKnown RBP27.59■■■□□ 2.01
LITAF-212ENST00000573332 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
LITAF-212ENST00000573332 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
LITAF-212ENST00000573332 PCF11O94913 1555 aaKnown RBP27.56■■■□□ 2
LITAF-212ENST00000573332 GLI2P10070 1586 aa27.56■■■□□ 2
LITAF-212ENST00000573332 KIF13AQ9H1H9 1805 aa27.54■■■□□ 2
LITAF-212ENST00000573332 PLEKHD1A6NEE1 506 aa27.53■■■□□ 2
LITAF-212ENST00000573332 CDK13Q14004 1512 aaKnown RBP27.52■■■□□ 2
LITAF-212ENST00000573332 CCDC18Q5T9S5 1454 aa27.5■■□□□ 1.99
LITAF-212ENST00000573332 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
LITAF-212ENST00000573332 CDK11AQ9UQ88 783 aaPredicted RBP27.49■■□□□ 1.99
LITAF-212ENST00000573332 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
LITAF-212ENST00000573332 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
LITAF-212ENST00000573332 MAP3K4Q9Y6R4 1608 aa27.39■■□□□ 1.98
LITAF-212ENST00000573332 TROQ12816 1431 aaPredicted RBP27.38■■□□□ 1.97
LITAF-212ENST00000573332 CD109Q6YHK3 1445 aa27.36■■□□□ 1.97
LITAF-212ENST00000573332 ABCA9Q8IUA7 1624 aa27.35■■□□□ 1.97
LITAF-212ENST00000573332 CFAP43Q8NDM7 1665 aa27.34■■□□□ 1.97
LITAF-212ENST00000573332 MAGI3Q5TCQ9 1506 aa27.32■■□□□ 1.96
LITAF-212ENST00000573332 TEX14Q8IWB6 1497 aa27.29■■□□□ 1.96
LITAF-212ENST00000573332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.29■■□□□ 1.96
LITAF-212ENST00000573332 PPRC1Q5VV67 1664 aaKnown RBP27.28■■□□□ 1.96
LITAF-212ENST00000573332 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
LITAF-212ENST00000573332 TSPOAP1O95153 1857 aa27.24■■□□□ 1.95
LITAF-212ENST00000573332 KIF14Q15058 1648 aa27.23■■□□□ 1.95
LITAF-212ENST00000573332 MTUS2Q5JR59 1369 aa27.22■■□□□ 1.95
LITAF-212ENST00000573332 TIAM1Q13009 1591 aa27.22■■□□□ 1.95
LITAF-212ENST00000573332 TTC37Q6PGP7 1564 aa27.21■■□□□ 1.95
LITAF-212ENST00000573332 PLCH2O75038 1416 aa27.19■■□□□ 1.94
LITAF-212ENST00000573332 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
LITAF-212ENST00000573332 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
LITAF-212ENST00000573332 NEO1Q92859 1461 aa27.15■■□□□ 1.94
LITAF-212ENST00000573332 APLP2Q06481 763 aa27.14■■□□□ 1.94
LITAF-212ENST00000573332 ARAP3Q8WWN8 1544 aa27.14■■□□□ 1.94
LITAF-212ENST00000573332 LRRC9Q6ZRR7 1453 aa27.13■■□□□ 1.93
LITAF-212ENST00000573332 FANCAO15360 1455 aa27.09■■□□□ 1.93
LITAF-212ENST00000573332 COL17A1Q9UMD9 1497 aaPredicted RBP27.09■■□□□ 1.93
LITAF-212ENST00000573332 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
LITAF-212ENST00000573332 KDM6BO15054 1643 aa27.08■■□□□ 1.93
LITAF-212ENST00000573332 EFCAB2Q5VUJ9 269 aa27.08■■□□□ 1.93
LITAF-212ENST00000573332 MYO5CQ9NQX4 1742 aa27.06■■□□□ 1.92
LITAF-212ENST00000573332 AKNAQ7Z591 1439 aa27.06■■□□□ 1.92
LITAF-212ENST00000573332 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
LITAF-212ENST00000573332 CFAP74Q9C0B2 1584 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms