RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
LINC01996-201ENST00000573270 DNAJC5Q9H3Z4 198 aa22.18■■□□□ 1.14
LINC01996-201ENST00000573270 IQGAP2Q13576 1575 aa22.17■■□□□ 1.14
LINC01996-201ENST00000573270 KIAA0586Q9BVV6 1533 aa22.11■■□□□ 1.13
LINC01996-201ENST00000573270 SHROOM2Q13796 1616 aa22.1■■□□□ 1.13
LINC01996-201ENST00000573270 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
LINC01996-201ENST00000573270 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
LINC01996-201ENST00000573270 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
LINC01996-201ENST00000573270 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
LINC01996-201ENST00000573270 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
LINC01996-201ENST00000573270 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
LINC01996-201ENST00000573270 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
LINC01996-201ENST00000573270 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
LINC01996-201ENST00000573270 EFCAB5A4FU69 1503 aa21.95■■□□□ 1.1
LINC01996-201ENST00000573270 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
LINC01996-201ENST00000573270 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
LINC01996-201ENST00000573270 PRG4Q92954 1404 aaPredicted RBP21.9■■□□□ 1.1
LINC01996-201ENST00000573270 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
LINC01996-201ENST00000573270 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.09
LINC01996-201ENST00000573270 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.09
LINC01996-201ENST00000573270 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
LINC01996-201ENST00000573270 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
LINC01996-201ENST00000573270 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
LINC01996-201ENST00000573270 CLIP1P30622 1438 aa21.86■■□□□ 1.09
LINC01996-201ENST00000573270 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
LINC01996-201ENST00000573270 FHOD3Q2V2M9 1422 aa21.82■■□□□ 1.08
LINC01996-201ENST00000573270 CARMIL2Q6F5E8 1435 aa21.82■■□□□ 1.08
LINC01996-201ENST00000573270 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
LINC01996-201ENST00000573270 P3H3Q8IVL6 736 aa21.73■■□□□ 1.07
LINC01996-201ENST00000573270 PCF11O94913 1555 aaKnown RBP21.73■■□□□ 1.07
LINC01996-201ENST00000573270 RAPGEF6Q8TEU7 1601 aa21.68■■□□□ 1.06
LINC01996-201ENST00000573270 ABCA8O94911 1581 aa21.66■■□□□ 1.06
LINC01996-201ENST00000573270 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
LINC01996-201ENST00000573270 PTPRGP23470 1445 aa21.64■■□□□ 1.06
LINC01996-201ENST00000573270 ADCY10Q96PN6 1610 aa21.64■■□□□ 1.05
LINC01996-201ENST00000573270 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
LINC01996-201ENST00000573270 PLB1Q6P1J6 1458 aa21.63■■□□□ 1.05
LINC01996-201ENST00000573270 LRRIQ1Q96JM4 1722 aa21.63■■□□□ 1.05
LINC01996-201ENST00000573270 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
LINC01996-201ENST00000573270 VPS8Q8N3P4 1428 aa21.61■■□□□ 1.05
LINC01996-201ENST00000573270 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
LINC01996-201ENST00000573270 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.05
LINC01996-201ENST00000573270 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
LINC01996-201ENST00000573270 NUP153P49790 1475 aaKnown RBP21.54■■□□□ 1.04
LINC01996-201ENST00000573270 CASKIN1Q8WXD9 1431 aa21.54■■□□□ 1.04
LINC01996-201ENST00000573270 CFAP43Q8NDM7 1665 aa21.53■■□□□ 1.04
LINC01996-201ENST00000573270 UHRF1BP1LA0JNW5 1464 aa21.53■■□□□ 1.04
LINC01996-201ENST00000573270 ZCCHC11Q5TAX3 1644 aaKnown RBP21.53■■□□□ 1.04
LINC01996-201ENST00000573270 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
LINC01996-201ENST00000573270 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
LINC01996-201ENST00000573270 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
LINC01996-201ENST00000573270 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
LINC01996-201ENST00000573270 KDM5BQ9UGL1 1544 aa21.44■■□□□ 1.02
LINC01996-201ENST00000573270 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
LINC01996-201ENST00000573270 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
LINC01996-201ENST00000573270 ARID3CA6NKF2 412 aa21.41■■□□□ 1.02
LINC01996-201ENST00000573270 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
LINC01996-201ENST00000573270 ATP10BO94823 1461 aa21.39■■□□□ 1.01
LINC01996-201ENST00000573270 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
LINC01996-201ENST00000573270 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
LINC01996-201ENST00000573270 MAP3K1Q13233 1512 aa21.32■■□□□ 1
LINC01996-201ENST00000573270 EHBP1L1Q8N3D4 1523 aa21.31■■□□□ 1
LINC01996-201ENST00000573270 WDR7Q9Y4E6 1490 aa21.28■■□□□ 1
LINC01996-201ENST00000573270 KIF14Q15058 1648 aa21.28■■□□□ 1
LINC01996-201ENST00000573270 ASXL2Q76L83 1435 aa21.28■■□□□ 1
LINC01996-201ENST00000573270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
LINC01996-201ENST00000573270 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
LINC01996-201ENST00000573270 LRRC9Q6ZRR7 1453 aa21.25■□□□□ 0.99
LINC01996-201ENST00000573270 DIP2BQ9P265 1576 aa21.23■□□□□ 0.99
LINC01996-201ENST00000573270 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
LINC01996-201ENST00000573270 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
LINC01996-201ENST00000573270 SUPT6HQ7KZ85 1726 aaKnown RBP21.23■□□□□ 0.99
LINC01996-201ENST00000573270 TTC37Q6PGP7 1564 aa21.22■□□□□ 0.99
LINC01996-201ENST00000573270 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.98
LINC01996-201ENST00000573270 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
LINC01996-201ENST00000573270 APLP2Q06481 763 aa21.18■□□□□ 0.98
LINC01996-201ENST00000573270 ABCA9Q8IUA7 1624 aa21.16■□□□□ 0.98
LINC01996-201ENST00000573270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.98
LINC01996-201ENST00000573270 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
LINC01996-201ENST00000573270 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
LINC01996-201ENST00000573270 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
LINC01996-201ENST00000573270 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 MAP3K4Q9Y6R4 1608 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 GLI2P10070 1586 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 PLEKHD1A6NEE1 506 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 ABCC10Q5T3U5 1492 aa21.12■□□□□ 0.97
LINC01996-201ENST00000573270 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
LINC01996-201ENST00000573270 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
LINC01996-201ENST00000573270 PPRC1Q5VV67 1664 aaKnown RBP21.05■□□□□ 0.96
LINC01996-201ENST00000573270 CDC42BPBQ9Y5S2 1711 aa21.05■□□□□ 0.96
LINC01996-201ENST00000573270 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
LINC01996-201ENST00000573270 TSPOAP1O95153 1857 aa21.05■□□□□ 0.96
LINC01996-201ENST00000573270 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
LINC01996-201ENST00000573270 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
LINC01996-201ENST00000573270 CFAP74Q9C0B2 1584 aa20.99■□□□□ 0.95
LINC01996-201ENST00000573270 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
LINC01996-201ENST00000573270 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
LINC01996-201ENST00000573270 ARAP3Q8WWN8 1544 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms