RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 GOLGA3Q08378 1498 aa38.14■■■■□ 3.7
TVP23A-206ENST00000572980 EHMT2Q96KQ7 1210 aa38.1■■■■□ 3.69
TVP23A-206ENST00000572980 JPH4Q96JJ6 628 aa38.08■■■■□ 3.69
TVP23A-206ENST00000572980 CTTNBP2Q8WZ74 1663 aa38.08■■■■□ 3.69
TVP23A-206ENST00000572980 IQGAP2Q13576 1575 aa38.06■■■■□ 3.68
TVP23A-206ENST00000572980 UBTFP17480 764 aaKnown RBP38.06■■■■□ 3.68
TVP23A-206ENST00000572980 SHROOM2Q13796 1616 aa38.01■■■■□ 3.68
TVP23A-206ENST00000572980 ARHGEF11O15085 1522 aa37.93■■■■□ 3.66
TVP23A-206ENST00000572980 PRG4Q92954 1404 aaPredicted RBP37.92■■■■□ 3.66
TVP23A-206ENST00000572980 UGGT2Q9NYU1 1516 aa37.87■■■■□ 3.65
TVP23A-206ENST00000572980 RIMBP3CA6NJZ7 1639 aa37.85■■■■□ 3.65
TVP23A-206ENST00000572980 RIMBP3BA6NNM3 1639 aa37.85■■■■□ 3.65
TVP23A-206ENST00000572980 RIMBP3Q9UFD9 1639 aa37.85■■■■□ 3.65
TVP23A-206ENST00000572980 CARMIL2Q6F5E8 1435 aa37.82■■■■□ 3.64
TVP23A-206ENST00000572980 ERCC6L2Q5T890 1561 aa37.8■■■■□ 3.64
TVP23A-206ENST00000572980 LOC105371045A0A1W2PR82 267 aa37.78■■■■□ 3.64
TVP23A-206ENST00000572980 TNIKQ9UKE5 1360 aa37.77■■■■□ 3.64
TVP23A-206ENST00000572980 RANGAP1P46060 587 aaPredicted RBP37.74■■■■□ 3.63
TVP23A-206ENST00000572980 DISP1Q96F81 1524 aa37.74■■■■□ 3.63
TVP23A-206ENST00000572980 KIAA0556O60303 1618 aa37.67■■■■□ 3.62
TVP23A-206ENST00000572980 ARAP1Q96P48 1450 aa37.65■■■■□ 3.62
TVP23A-206ENST00000572980 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
TVP23A-206ENST00000572980 SAMD9Q5K651 1589 aa37.61■■■■□ 3.61
TVP23A-206ENST00000572980 EFCAB5A4FU69 1503 aa37.59■■■■□ 3.61
TVP23A-206ENST00000572980 P3H3Q8IVL6 736 aa37.58■■■■□ 3.61
TVP23A-206ENST00000572980 PTPRGP23470 1445 aa37.57■■■■□ 3.6
TVP23A-206ENST00000572980 TTBK1Q5TCY1 1321 aaPredicted RBP37.54■■■■□ 3.6
TVP23A-206ENST00000572980 ARHGAP35Q9NRY4 1499 aa37.48■■■■□ 3.59
TVP23A-206ENST00000572980 CLIP1P30622 1438 aa37.48■■■■□ 3.59
TVP23A-206ENST00000572980 FHOD3Q2V2M9 1422 aa37.44■■■■□ 3.58
TVP23A-206ENST00000572980 CEP162Q5TB80 1403 aa37.43■■■■□ 3.58
TVP23A-206ENST00000572980 UACAQ9BZF9 1416 aa37.32■■■■□ 3.56
TVP23A-206ENST00000572980 FMN1Q68DA7 1419 aa37.27■■■■□ 3.56
TVP23A-206ENST00000572980 PLB1Q6P1J6 1458 aa37.26■■■■□ 3.56
TVP23A-206ENST00000572980 UHRF1BP1LA0JNW5 1464 aa37.23■■■■□ 3.55
TVP23A-206ENST00000572980 ABCA8O94911 1581 aa37.23■■■■□ 3.55
TVP23A-206ENST00000572980 ADCY10Q96PN6 1610 aa37.22■■■■□ 3.55
TVP23A-206ENST00000572980 ABCC2Q92887 1545 aa37.22■■■■□ 3.55
TVP23A-206ENST00000572980 NPM1P06748 294 aaKnown RBP eCLIP37.17■■■■□ 3.54
TVP23A-206ENST00000572980 RAPGEF6Q8TEU7 1601 aa37.16■■■■□ 3.54
TVP23A-206ENST00000572980 KDM5BQ9UGL1 1544 aa37.06■■■■□ 3.52
TVP23A-206ENST00000572980 ATP1B4Q9UN42 357 aaPredicted RBP37.04■■■■□ 3.52
TVP23A-206ENST00000572980 NUP153P49790 1475 aaKnown RBP37.02■■■■□ 3.52
TVP23A-206ENST00000572980 CASKIN1Q8WXD9 1431 aa37.01■■■■□ 3.52
TVP23A-206ENST00000572980 HECW1Q76N89 1606 aa36.99■■■■□ 3.51
TVP23A-206ENST00000572980 ARID3CA6NKF2 412 aa36.98■■■■□ 3.51
TVP23A-206ENST00000572980 PCF11O94913 1555 aaKnown RBP36.97■■■■□ 3.51
TVP23A-206ENST00000572980 ZCCHC11Q5TAX3 1644 aaKnown RBP36.96■■■■□ 3.51
TVP23A-206ENST00000572980 VPS8Q8N3P4 1428 aa36.95■■■■□ 3.51
TVP23A-206ENST00000572980 ATP10BO94823 1461 aa36.95■■■■□ 3.51
TVP23A-206ENST00000572980 FYCO1Q9BQS8 1478 aa36.95■■■■□ 3.51
TVP23A-206ENST00000572980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.92■■■■□ 3.5
TVP23A-206ENST00000572980 HNRNPUL2Q1KMD3 747 aaKnown RBP36.92■■■■□ 3.5
TVP23A-206ENST00000572980 MAPKBP1O60336 1514 aa36.9■■■■□ 3.5
TVP23A-206ENST00000572980 EPRSP07814 1512 aaKnown RBP36.87■■■■□ 3.49
TVP23A-206ENST00000572980 ASXL2Q76L83 1435 aa36.84■■■■□ 3.49
TVP23A-206ENST00000572980 CCDC18Q5T9S5 1454 aa36.82■■■■□ 3.49
TVP23A-206ENST00000572980 CDK13Q14004 1512 aaKnown RBP36.81■■■■□ 3.48
TVP23A-206ENST00000572980 LRRIQ1Q96JM4 1722 aa36.77■■■■□ 3.48
TVP23A-206ENST00000572980 PLEKHD1A6NEE1 506 aa36.77■■■■□ 3.48
TVP23A-206ENST00000572980 CDK11AQ9UQ88 783 aaPredicted RBP36.77■■■■□ 3.48
TVP23A-206ENST00000572980 WDR7Q9Y4E6 1490 aa36.74■■■■□ 3.47
TVP23A-206ENST00000572980 TRHP20396 242 aaPredicted RBP36.67■■■■□ 3.46
TVP23A-206ENST00000572980 ABCC10Q5T3U5 1492 aa36.67■■■■□ 3.46
TVP23A-206ENST00000572980 KCNH8Q96L42 1107 aa36.65■■■■□ 3.46
TVP23A-206ENST00000572980 APLP2Q06481 763 aa36.64■■■■□ 3.46
TVP23A-206ENST00000572980 FAM69CQ0P6D2 419 aa36.61■■■■□ 3.45
TVP23A-206ENST00000572980 DIP2BQ9P265 1576 aa36.59■■■■□ 3.45
TVP23A-206ENST00000572980 TROQ12816 1431 aaPredicted RBP36.57■■■■□ 3.44
TVP23A-206ENST00000572980 MAP3K1Q13233 1512 aa36.56■■■■□ 3.44
TVP23A-206ENST00000572980 TIAM1Q13009 1591 aa36.56■■■■□ 3.44
TVP23A-206ENST00000572980 CFAP43Q8NDM7 1665 aa36.55■■■■□ 3.44
TVP23A-206ENST00000572980 GLI2P10070 1586 aa36.53■■■■□ 3.44
TVP23A-206ENST00000572980 MTUS2Q5JR59 1369 aa36.53■■■■□ 3.44
TVP23A-206ENST00000572980 KIF13AQ9H1H9 1805 aa36.52■■■■□ 3.44
TVP23A-206ENST00000572980 MAGI3Q5TCQ9 1506 aa36.5■■■■□ 3.43
TVP23A-206ENST00000572980 KIF14Q15058 1648 aa36.43■■■■□ 3.42
TVP23A-206ENST00000572980 EHBP1L1Q8N3D4 1523 aa36.43■■■■□ 3.42
TVP23A-206ENST00000572980 LRRC9Q6ZRR7 1453 aa36.42■■■■□ 3.42
TVP23A-206ENST00000572980 ABCA9Q8IUA7 1624 aa36.4■■■■□ 3.42
TVP23A-206ENST00000572980 KANK4Q5T7N3 995 aaPredicted RBP36.39■■■■□ 3.42
TVP23A-206ENST00000572980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.38■■■■□ 3.41
TVP23A-206ENST00000572980 MAP3K4Q9Y6R4 1608 aa36.37■■■■□ 3.41
TVP23A-206ENST00000572980 CD109Q6YHK3 1445 aa36.37■■■■□ 3.41
TVP23A-206ENST00000572980 TTC37Q6PGP7 1564 aa36.31■■■■□ 3.4
TVP23A-206ENST00000572980 TSPOAP1O95153 1857 aa36.28■■■■□ 3.4
TVP23A-206ENST00000572980 SUPT6HQ7KZ85 1726 aaKnown RBP36.28■■■■□ 3.4
TVP23A-206ENST00000572980 NCOA2Q15596 1464 aa36.22■■■■□ 3.39
TVP23A-206ENST00000572980 TEX14Q8IWB6 1497 aa36.21■■■■□ 3.39
TVP23A-206ENST00000572980 PLCH2O75038 1416 aa36.2■■■■□ 3.39
TVP23A-206ENST00000572980 CCNB3Q8WWL7 1395 aa36.2■■■■□ 3.38
TVP23A-206ENST00000572980 MYO5CQ9NQX4 1742 aa36.19■■■■□ 3.38
TVP23A-206ENST00000572980 PPRC1Q5VV67 1664 aaKnown RBP36.18■■■■□ 3.38
TVP23A-206ENST00000572980 ARAP3Q8WWN8 1544 aa36.14■■■■□ 3.38
TVP23A-206ENST00000572980 GPATCH8Q9UKJ3 1502 aaKnown RBP36.14■■■■□ 3.38
TVP23A-206ENST00000572980 CDC42BPAQ5VT25 1732 aa36.12■■■■□ 3.37
TVP23A-206ENST00000572980 EFCAB2Q5VUJ9 269 aa36.11■■■■□ 3.37
TVP23A-206ENST00000572980 PPARGC1BQ86YN6 1023 aaKnown RBP36.1■■■■□ 3.37
TVP23A-206ENST00000572980 PREX2Q70Z35 1606 aa36.1■■■■□ 3.37
TVP23A-206ENST00000572980 ARHGAP5Q13017 1502 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms