RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
LITAF-209ENST00000571688 TRIM52Q96A61 297 aa23.7■■□□□ 1.38
LITAF-209ENST00000571688 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
LITAF-209ENST00000571688 ANP32CO43423 234 aa23.65■■□□□ 1.38
LITAF-209ENST00000571688 MAP3K1Q13233 1512 aa23.65■■□□□ 1.38
LITAF-209ENST00000571688 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
LITAF-209ENST00000571688 TIAM1Q13009 1591 aa23.63■■□□□ 1.37
LITAF-209ENST00000571688 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
LITAF-209ENST00000571688 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
LITAF-209ENST00000571688 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
LITAF-209ENST00000571688 ERICH6Q7L0X2 663 aa23.52■■□□□ 1.36
LITAF-209ENST00000571688 CUX1P39880 1505 aa23.52■■□□□ 1.36
LITAF-209ENST00000571688 LRRC9Q6ZRR7 1453 aa23.52■■□□□ 1.36
LITAF-209ENST00000571688 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
LITAF-209ENST00000571688 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
LITAF-209ENST00000571688 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
LITAF-209ENST00000571688 CFAP43Q8NDM7 1665 aa23.43■■□□□ 1.34
LITAF-209ENST00000571688 ERICH6BQ5W0A0 696 aa23.42■■□□□ 1.34
LITAF-209ENST00000571688 FAM50AQ14320 339 aaKnown RBP23.38■■□□□ 1.33
LITAF-209ENST00000571688 HNRNPUQ00839 825 aaKnown RBP eCLIP23.38■■□□□ 1.33
LITAF-209ENST00000571688 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
LITAF-209ENST00000571688 PPP4R2Q9NY27 417 aa23.33■■□□□ 1.33
LITAF-209ENST00000571688 TONSLQ96HA7 1378 aa23.33■■□□□ 1.32
LITAF-209ENST00000571688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.32■■□□□ 1.32
LITAF-209ENST00000571688 DEKP35659 375 aaKnown RBP23.31■■□□□ 1.32
LITAF-209ENST00000571688 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
LITAF-209ENST00000571688 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
LITAF-209ENST00000571688 IGF1RP08069 1367 aa23.25■■□□□ 1.31
LITAF-209ENST00000571688 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
LITAF-209ENST00000571688 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
LITAF-209ENST00000571688 UACAQ9BZF9 1416 aa23.2■■□□□ 1.3
LITAF-209ENST00000571688 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
LITAF-209ENST00000571688 PRKCSHP14314 528 aaPredicted RBP23.18■■□□□ 1.3
LITAF-209ENST00000571688 CFTRP13569 1480 aa23.17■■□□□ 1.3
LITAF-209ENST00000571688 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
LITAF-209ENST00000571688 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
LITAF-209ENST00000571688 NCOA2Q15596 1464 aa23.15■■□□□ 1.3
LITAF-209ENST00000571688 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
LITAF-209ENST00000571688 FYCO1Q9BQS8 1478 aa23.15■■□□□ 1.3
LITAF-209ENST00000571688 HFM1A2PYH4 1435 aa23.14■■□□□ 1.3
LITAF-209ENST00000571688 WASHC2AQ641Q2 1341 aa23.14■■□□□ 1.29
LITAF-209ENST00000571688 B4GALNT3Q6L9W6 998 aa23.12■■□□□ 1.29
LITAF-209ENST00000571688 FGD6Q6ZV73 1430 aa23.12■■□□□ 1.29
LITAF-209ENST00000571688 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
LITAF-209ENST00000571688 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
LITAF-209ENST00000571688 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
LITAF-209ENST00000571688 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.292e-8■■■□□ 18.1
LITAF-209ENST00000571688 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
LITAF-209ENST00000571688 CASKIN1Q8WXD9 1431 aa23.07■■□□□ 1.28
LITAF-209ENST00000571688 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
LITAF-209ENST00000571688 CCDC184Q52MB2 194 aa23.07■■□□□ 1.28
LITAF-209ENST00000571688 PTPRKQ15262 1439 aa23.06■■□□□ 1.28
LITAF-209ENST00000571688 PAK3O75914 559 aaPredicted RBP23.06■■□□□ 1.28
LITAF-209ENST00000571688 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
LITAF-209ENST00000571688 NAIPQ13075 1403 aa23.03■■□□□ 1.28
LITAF-209ENST00000571688 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
LITAF-209ENST00000571688 FHOD3Q2V2M9 1422 aa23.03■■□□□ 1.28
LITAF-209ENST00000571688 NBR1Q14596 966 aa23.02■■□□□ 1.28
LITAF-209ENST00000571688 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
LITAF-209ENST00000571688 P3H3Q8IVL6 736 aa23■■□□□ 1.27
LITAF-209ENST00000571688 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
LITAF-209ENST00000571688 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
LITAF-209ENST00000571688 FMN1Q68DA7 1419 aa22.95■■□□□ 1.27
LITAF-209ENST00000571688 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.27
LITAF-209ENST00000571688 NCOA1Q15788 1441 aa22.95■■□□□ 1.26
LITAF-209ENST00000571688 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
LITAF-209ENST00000571688 IPO9Q96P70 1041 aaKnown RBP22.93■■□□□ 1.26
LITAF-209ENST00000571688 HECW1Q76N89 1606 aa22.92■■□□□ 1.26
LITAF-209ENST00000571688 CCDC7Q96M83 1385 aa22.92■■□□□ 1.26
LITAF-209ENST00000571688 DENND4BO75064 1496 aaPredicted RBP22.9■■□□□ 1.26
LITAF-209ENST00000571688 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
LITAF-209ENST00000571688 SMG6Q86US8 1419 aaKnown RBP22.89■■□□□ 1.26
LITAF-209ENST00000571688 ANP32AP39687 249 aaKnown RBP22.89■■□□□ 1.26
LITAF-209ENST00000571688 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
LITAF-209ENST00000571688 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
LITAF-209ENST00000571688 MYOM3Q5VTT5 1437 aa22.87■■□□□ 1.25
LITAF-209ENST00000571688 GCC2Q8IWJ2 1684 aa22.87■■□□□ 1.25
LITAF-209ENST00000571688 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
LITAF-209ENST00000571688 MTUS2Q5JR59 1369 aa22.87■■□□□ 1.25
LITAF-209ENST00000571688 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
LITAF-209ENST00000571688 RNF123Q5XPI4 1314 aa22.86■■□□□ 1.25
LITAF-209ENST00000571688 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
LITAF-209ENST00000571688 ANO8Q9HCE9 1232 aaPredicted RBP22.86■■□□□ 1.25
LITAF-209ENST00000571688 LRRIQ1Q96JM4 1722 aa22.85■■□□□ 1.25
LITAF-209ENST00000571688 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
LITAF-209ENST00000571688 ZBTB47Q9UFB7 747 aaPredicted RBP22.83■■□□□ 1.25
LITAF-209ENST00000571688 SUPT6HQ7KZ85 1726 aaKnown RBP22.81■■□□□ 1.24
LITAF-209ENST00000571688 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
LITAF-209ENST00000571688 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
LITAF-209ENST00000571688 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
LITAF-209ENST00000571688 EHBP1L1Q8N3D4 1523 aa22.76■■□□□ 1.23
LITAF-209ENST00000571688 CUL7Q14999 1698 aa22.75■■□□□ 1.23
LITAF-209ENST00000571688 L3MBTL2Q969R5 705 aa22.75■■□□□ 1.23
LITAF-209ENST00000571688 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
LITAF-209ENST00000571688 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
LITAF-209ENST00000571688 KDM6BO15054 1643 aa22.74■■□□□ 1.23
LITAF-209ENST00000571688 ARHGEF11O15085 1522 aa22.74■■□□□ 1.23
LITAF-209ENST00000571688 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
LITAF-209ENST00000571688 KIF7Q2M1P5 1343 aa22.73■■□□□ 1.23
LITAF-209ENST00000571688 SPATA31E1Q6ZUB1 1445 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms