RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
TOM1L1-208ENST00000570977 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
TOM1L1-208ENST00000570977 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
TOM1L1-208ENST00000570977 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
TOM1L1-208ENST00000570977 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
TOM1L1-208ENST00000570977 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
TOM1L1-208ENST00000570977 PEG3Q9GZU2 1588 aa11.54□□□□□ -0.56
TOM1L1-208ENST00000570977 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
TOM1L1-208ENST00000570977 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
TOM1L1-208ENST00000570977 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
TOM1L1-208ENST00000570977 WDR62O43379 1518 aa11.5□□□□□ -0.57
TOM1L1-208ENST00000570977 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
TOM1L1-208ENST00000570977 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
TOM1L1-208ENST00000570977 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
TOM1L1-208ENST00000570977 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
TOM1L1-208ENST00000570977 HAX1O00165 279 aa11.37□□□□□ -0.59
TOM1L1-208ENST00000570977 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
TOM1L1-208ENST00000570977 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
TOM1L1-208ENST00000570977 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
TOM1L1-208ENST00000570977 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
TOM1L1-208ENST00000570977 MIER1Q8N108 512 aa11.35□□□□□ -0.59
TOM1L1-208ENST00000570977 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
TOM1L1-208ENST00000570977 FANCD2Q9BXW9 1451 aa11.34□□□□□ -0.59
TOM1L1-208ENST00000570977 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
TOM1L1-208ENST00000570977 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
TOM1L1-208ENST00000570977 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
TOM1L1-208ENST00000570977 CFTRP13569 1480 aa11.3□□□□□ -0.6
TOM1L1-208ENST00000570977 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
TOM1L1-208ENST00000570977 URB2Q14146 1524 aaKnown RBP11.28□□□□□ -0.6
TOM1L1-208ENST00000570977 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-208ENST00000570977 EVX2Q03828 476 aa11.26□□□□□ -0.61
TOM1L1-208ENST00000570977 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
TOM1L1-208ENST00000570977 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-208ENST00000570977 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
TOM1L1-208ENST00000570977 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
TOM1L1-208ENST00000570977 ZNF608Q9ULD9 1512 aaPredicted RBP11.21□□□□□ -0.61
TOM1L1-208ENST00000570977 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
TOM1L1-208ENST00000570977 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
TOM1L1-208ENST00000570977 WIZO95785 1651 aa11.18□□□□□ -0.62
TOM1L1-208ENST00000570977 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
TOM1L1-208ENST00000570977 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
TOM1L1-208ENST00000570977 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
TOM1L1-208ENST00000570977 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
TOM1L1-208ENST00000570977 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
TOM1L1-208ENST00000570977 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
TOM1L1-208ENST00000570977 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
TOM1L1-208ENST00000570977 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
TOM1L1-208ENST00000570977 IFNLR1Q8IU57 520 aaPredicted RBP11.08□□□□□ -0.64
TOM1L1-208ENST00000570977 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
TOM1L1-208ENST00000570977 AQRO60306 1485 aaKnown RBP eCLIP11.07□□□□□ -0.64
TOM1L1-208ENST00000570977 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
TOM1L1-208ENST00000570977 NUBP1P53384 320 aa11.06□□□□□ -0.64
TOM1L1-208ENST00000570977 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
TOM1L1-208ENST00000570977 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
TOM1L1-208ENST00000570977 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
TOM1L1-208ENST00000570977 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
TOM1L1-208ENST00000570977 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
TOM1L1-208ENST00000570977 CHD1O14646 1710 aa11.01□□□□□ -0.65
TOM1L1-208ENST00000570977 GABBR2O75899 941 aa11.01□□□□□ -0.65
TOM1L1-208ENST00000570977 TARBP1Q13395 1621 aaKnown RBP10.99□□□□□ -0.65
TOM1L1-208ENST00000570977 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
TOM1L1-208ENST00000570977 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
TOM1L1-208ENST00000570977 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
TOM1L1-208ENST00000570977 DNMBPQ6XZF7 1577 aa10.98□□□□□ -0.65
TOM1L1-208ENST00000570977 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
TOM1L1-208ENST00000570977 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
TOM1L1-208ENST00000570977 CCDC88BA6NC98 1476 aa10.97□□□□□ -0.65
TOM1L1-208ENST00000570977 CLASP1Q7Z460 1538 aa10.97□□□□□ -0.65
TOM1L1-208ENST00000570977 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
TOM1L1-208ENST00000570977 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
TOM1L1-208ENST00000570977 POLA1P09884 1462 aaPredicted RBP10.94□□□□□ -0.66
TOM1L1-208ENST00000570977 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
TOM1L1-208ENST00000570977 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
TOM1L1-208ENST00000570977 SOGA1O94964 1423 aa10.92□□□□□ -0.66
TOM1L1-208ENST00000570977 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
TOM1L1-208ENST00000570977 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
TOM1L1-208ENST00000570977 RAD54L2Q9Y4B4 1467 aa10.91□□□□□ -0.66
TOM1L1-208ENST00000570977 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
TOM1L1-208ENST00000570977 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
TOM1L1-208ENST00000570977 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
TOM1L1-208ENST00000570977 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
TOM1L1-208ENST00000570977 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
TOM1L1-208ENST00000570977 PYGBP11216 843 aa10.88□□□□□ -0.67
TOM1L1-208ENST00000570977 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
TOM1L1-208ENST00000570977 MAP3K13O43283 966 aa10.87□□□□□ -0.67
TOM1L1-208ENST00000570977 GSE1Q14687 1217 aa10.87□□□□□ -0.67
TOM1L1-208ENST00000570977 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
TOM1L1-208ENST00000570977 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
TOM1L1-208ENST00000570977 CLCN6P51797 869 aa10.85□□□□□ -0.67
TOM1L1-208ENST00000570977 GRIN2BQ13224 1484 aa10.85□□□□□ -0.67
TOM1L1-208ENST00000570977 PCDHB13Q9Y5F0 798 aa10.82□□□□□ -0.68
TOM1L1-208ENST00000570977 DCBLD2Q96PD2 775 aa10.81□□□□□ -0.68
TOM1L1-208ENST00000570977 KDM4FA0A1W2PPD8 638 aa10.8□□□□□ -0.68
TOM1L1-208ENST00000570977 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
TOM1L1-208ENST00000570977 DAXXQ9UER7 740 aaPredicted RBP10.79□□□□□ -0.68
TOM1L1-208ENST00000570977 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
TOM1L1-208ENST00000570977 FGD5Q6ZNL6 1462 aa10.79□□□□□ -0.68
TOM1L1-208ENST00000570977 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
TOM1L1-208ENST00000570977 ERCC6L2Q5T890 1561 aa10.75□□□□□ -0.69
TOM1L1-208ENST00000570977 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms