RNA–Protein interactions for RNA: ENST00000570881.1

TBC1D28-203, Transcript of TBC1 domain family member 28, humanhuman

TSL 5

Gene TBC1D28, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28-203ENST00000570881 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
TBC1D28-203ENST00000570881 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
TBC1D28-203ENST00000570881 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
TBC1D28-203ENST00000570881 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
TBC1D28-203ENST00000570881 KIF21BO75037 1637 aa28.91■■■□□ 2.22
TBC1D28-203ENST00000570881 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
TBC1D28-203ENST00000570881 CTTNBP2Q8WZ74 1663 aa28.87■■■□□ 2.21
TBC1D28-203ENST00000570881 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
TBC1D28-203ENST00000570881 ERCC6L2Q5T890 1561 aa28.81■■■□□ 2.2
TBC1D28-203ENST00000570881 PRG4Q92954 1404 aaPredicted RBP28.79■■■□□ 2.2
TBC1D28-203ENST00000570881 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
TBC1D28-203ENST00000570881 UGGT2Q9NYU1 1516 aa28.72■■■□□ 2.19
TBC1D28-203ENST00000570881 GOLGA3Q08378 1498 aa28.72■■■□□ 2.19
TBC1D28-203ENST00000570881 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
TBC1D28-203ENST00000570881 DISP1Q96F81 1524 aa28.64■■■□□ 2.17
TBC1D28-203ENST00000570881 CARMIL2Q6F5E8 1435 aa28.62■■■□□ 2.17
TBC1D28-203ENST00000570881 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
TBC1D28-203ENST00000570881 KIAA0556O60303 1618 aa28.58■■■□□ 2.17
TBC1D28-203ENST00000570881 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
TBC1D28-203ENST00000570881 TNIKQ9UKE5 1360 aa28.52■■■□□ 2.16
TBC1D28-203ENST00000570881 SAMD9Q5K651 1589 aa28.5■■■□□ 2.15
TBC1D28-203ENST00000570881 PTPRGP23470 1445 aa28.48■■■□□ 2.15
TBC1D28-203ENST00000570881 EFCAB5A4FU69 1503 aa28.4■■■□□ 2.14
TBC1D28-203ENST00000570881 RANGAP1P46060 587 aaPredicted RBP28.39■■■□□ 2.14
TBC1D28-203ENST00000570881 P3H3Q8IVL6 736 aa28.36■■■□□ 2.13
TBC1D28-203ENST00000570881 TTBK1Q5TCY1 1321 aaPredicted RBP28.36■■■□□ 2.13
TBC1D28-203ENST00000570881 ADCY10Q96PN6 1610 aa28.36■■■□□ 2.13
TBC1D28-203ENST00000570881 LOC105371045A0A1W2PR82 267 aa28.31■■■□□ 2.12
TBC1D28-203ENST00000570881 UACAQ9BZF9 1416 aa28.31■■■□□ 2.12
TBC1D28-203ENST00000570881 ARHGAP35Q9NRY4 1499 aa28.3■■■□□ 2.12
TBC1D28-203ENST00000570881 UHRF1BP1LA0JNW5 1464 aa28.29■■■□□ 2.12
TBC1D28-203ENST00000570881 FHOD3Q2V2M9 1422 aa28.29■■■□□ 2.12
TBC1D28-203ENST00000570881 ABCA8O94911 1581 aa28.26■■■□□ 2.11
TBC1D28-203ENST00000570881 ABCC2Q92887 1545 aa28.26■■■□□ 2.11
TBC1D28-203ENST00000570881 PLB1Q6P1J6 1458 aa28.25■■■□□ 2.11
TBC1D28-203ENST00000570881 CLIP1P30622 1438 aa28.19■■■□□ 2.1
TBC1D28-203ENST00000570881 NPM1P06748 294 aaKnown RBP eCLIP28.16■■■□□ 2.1
TBC1D28-203ENST00000570881 RAPGEF6Q8TEU7 1601 aa28.16■■■□□ 2.1
TBC1D28-203ENST00000570881 KDM5BQ9UGL1 1544 aa28.15■■■□□ 2.1
TBC1D28-203ENST00000570881 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
TBC1D28-203ENST00000570881 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
TBC1D28-203ENST00000570881 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
TBC1D28-203ENST00000570881 ZCCHC11Q5TAX3 1644 aaKnown RBP28.1■■■□□ 2.09
TBC1D28-203ENST00000570881 NUP153P49790 1475 aaKnown RBP28.05■■■□□ 2.08
TBC1D28-203ENST00000570881 ATP10BO94823 1461 aa28.02■■■□□ 2.08
TBC1D28-203ENST00000570881 ASXL2Q76L83 1435 aa27.99■■■□□ 2.07
TBC1D28-203ENST00000570881 HECW1Q76N89 1606 aa27.96■■■□□ 2.07
TBC1D28-203ENST00000570881 KIF13AQ9H1H9 1805 aa27.96■■■□□ 2.07
TBC1D28-203ENST00000570881 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
TBC1D28-203ENST00000570881 CASKIN1Q8WXD9 1431 aa27.94■■■□□ 2.06
TBC1D28-203ENST00000570881 ARID3CA6NKF2 412 aa27.94■■■□□ 2.06
TBC1D28-203ENST00000570881 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
TBC1D28-203ENST00000570881 ABCC10Q5T3U5 1492 aa27.94■■■□□ 2.06
TBC1D28-203ENST00000570881 DIP2BQ9P265 1576 aa27.91■■■□□ 2.06
TBC1D28-203ENST00000570881 LRRIQ1Q96JM4 1722 aa27.91■■■□□ 2.06
TBC1D28-203ENST00000570881 FYCO1Q9BQS8 1478 aa27.89■■■□□ 2.05
TBC1D28-203ENST00000570881 WDR7Q9Y4E6 1490 aa27.89■■■□□ 2.05
TBC1D28-203ENST00000570881 EPRSP07814 1512 aaKnown RBP27.88■■■□□ 2.05
TBC1D28-203ENST00000570881 ATP1B4Q9UN42 357 aaPredicted RBP27.86■■■□□ 2.05
TBC1D28-203ENST00000570881 CDK13Q14004 1512 aaKnown RBP27.86■■■□□ 2.05
TBC1D28-203ENST00000570881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
TBC1D28-203ENST00000570881 HNRNPUL2Q1KMD3 747 aaKnown RBP27.84■■■□□ 2.05
TBC1D28-203ENST00000570881 GLI2P10070 1586 aa27.83■■■□□ 2.05
TBC1D28-203ENST00000570881 FAM69CQ0P6D2 419 aa27.83■■■□□ 2.05
TBC1D28-203ENST00000570881 CCDC18Q5T9S5 1454 aa27.79■■■□□ 2.04
TBC1D28-203ENST00000570881 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
TBC1D28-203ENST00000570881 PLEKHD1A6NEE1 506 aa27.76■■■□□ 2.03
TBC1D28-203ENST00000570881 KCNH8Q96L42 1107 aa27.74■■■□□ 2.03
TBC1D28-203ENST00000570881 MAP3K4Q9Y6R4 1608 aa27.71■■■□□ 2.03
TBC1D28-203ENST00000570881 CDK11AQ9UQ88 783 aaPredicted RBP27.7■■■□□ 2.02
TBC1D28-203ENST00000570881 TSPOAP1O95153 1857 aa27.7■■■□□ 2.02
TBC1D28-203ENST00000570881 CFAP43Q8NDM7 1665 aa27.68■■■□□ 2.02
TBC1D28-203ENST00000570881 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
TBC1D28-203ENST00000570881 TROQ12816 1431 aaPredicted RBP27.66■■■□□ 2.02
TBC1D28-203ENST00000570881 PPRC1Q5VV67 1664 aaKnown RBP27.65■■■□□ 2.02
TBC1D28-203ENST00000570881 MAGI3Q5TCQ9 1506 aa27.64■■■□□ 2.02
TBC1D28-203ENST00000570881 CD109Q6YHK3 1445 aa27.6■■■□□ 2.01
TBC1D28-203ENST00000570881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.01
TBC1D28-203ENST00000570881 KIF14Q15058 1648 aa27.58■■■□□ 2.01
TBC1D28-203ENST00000570881 TIAM1Q13009 1591 aa27.57■■■□□ 2
TBC1D28-203ENST00000570881 MAP3K1Q13233 1512 aa27.56■■■□□ 2
TBC1D28-203ENST00000570881 TTC37Q6PGP7 1564 aa27.56■■■□□ 2
TBC1D28-203ENST00000570881 TEX14Q8IWB6 1497 aa27.51■■■□□ 2
TBC1D28-203ENST00000570881 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
TBC1D28-203ENST00000570881 EHBP1L1Q8N3D4 1523 aa27.49■■□□□ 1.99
TBC1D28-203ENST00000570881 MYO5CQ9NQX4 1742 aa27.47■■□□□ 1.99
TBC1D28-203ENST00000570881 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
TBC1D28-203ENST00000570881 PLCH2O75038 1416 aa27.43■■□□□ 1.98
TBC1D28-203ENST00000570881 ARAP3Q8WWN8 1544 aa27.41■■□□□ 1.98
TBC1D28-203ENST00000570881 APLP2Q06481 763 aa27.4■■□□□ 1.98
TBC1D28-203ENST00000570881 CDC42BPAQ5VT25 1732 aa27.39■■□□□ 1.98
TBC1D28-203ENST00000570881 CDC42BPBQ9Y5S2 1711 aa27.39■■□□□ 1.98
TBC1D28-203ENST00000570881 KANK4Q5T7N3 995 aaPredicted RBP27.39■■□□□ 1.98
TBC1D28-203ENST00000570881 SUPT6HQ7KZ85 1726 aaKnown RBP27.38■■□□□ 1.97
TBC1D28-203ENST00000570881 NEO1Q92859 1461 aa27.38■■□□□ 1.97
TBC1D28-203ENST00000570881 KDM6BO15054 1643 aa27.38■■□□□ 1.97
TBC1D28-203ENST00000570881 PHLDB1Q86UU1 1377 aa27.37■■□□□ 1.97
TBC1D28-203ENST00000570881 PREX2Q70Z35 1606 aa27.37■■□□□ 1.97
TBC1D28-203ENST00000570881 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
TBC1D28-203ENST00000570881 FANCAO15360 1455 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms