RNA–Protein interactions for RNA: ENST00000570587.5

KCNAB3-202, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNAB3, Length 2,406 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3-202ENST00000570587 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
KCNAB3-202ENST00000570587 RRBP1Q9P2E9 1410 aaKnown RBP18.73■□□□□ 0.59
KCNAB3-202ENST00000570587 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
KCNAB3-202ENST00000570587 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
KCNAB3-202ENST00000570587 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
KCNAB3-202ENST00000570587 CUX1P39880 1505 aa18.67■□□□□ 0.58
KCNAB3-202ENST00000570587 ANP32CO43423 234 aa18.67■□□□□ 0.58
KCNAB3-202ENST00000570587 UBE2Q2Q8WVN8 375 aa18.67■□□□□ 0.58
KCNAB3-202ENST00000570587 MAPKBP1O60336 1514 aa18.66■□□□□ 0.58
KCNAB3-202ENST00000570587 CFTRP13569 1480 aa18.66■□□□□ 0.58
KCNAB3-202ENST00000570587 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
KCNAB3-202ENST00000570587 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
KCNAB3-202ENST00000570587 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
KCNAB3-202ENST00000570587 NBR1Q14596 966 aa18.58■□□□□ 0.56
KCNAB3-202ENST00000570587 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
KCNAB3-202ENST00000570587 PRXQ9BXM0 1461 aa18.57■□□□□ 0.56
KCNAB3-202ENST00000570587 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
KCNAB3-202ENST00000570587 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
KCNAB3-202ENST00000570587 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
KCNAB3-202ENST00000570587 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
KCNAB3-202ENST00000570587 IRX6P78412 446 aaPredicted RBP18.53■□□□□ 0.56
KCNAB3-202ENST00000570587 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.55
KCNAB3-202ENST00000570587 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
KCNAB3-202ENST00000570587 RTL5Q5HYW3 569 aaPredicted RBP18.5■□□□□ 0.55
KCNAB3-202ENST00000570587 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
KCNAB3-202ENST00000570587 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
KCNAB3-202ENST00000570587 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
KCNAB3-202ENST00000570587 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
KCNAB3-202ENST00000570587 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
KCNAB3-202ENST00000570587 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
KCNAB3-202ENST00000570587 IPO9Q96P70 1041 aaKnown RBP18.42■□□□□ 0.54
KCNAB3-202ENST00000570587 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
KCNAB3-202ENST00000570587 NESP48681 1621 aa18.4■□□□□ 0.54
KCNAB3-202ENST00000570587 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
KCNAB3-202ENST00000570587 SIN3AQ96ST3 1273 aa18.39■□□□□ 0.53
KCNAB3-202ENST00000570587 ANP32AP39687 249 aaKnown RBP18.39■□□□□ 0.53
KCNAB3-202ENST00000570587 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.53
KCNAB3-202ENST00000570587 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
KCNAB3-202ENST00000570587 IGF1RP08069 1367 aa18.37■□□□□ 0.53
KCNAB3-202ENST00000570587 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
KCNAB3-202ENST00000570587 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
KCNAB3-202ENST00000570587 FGD5Q6ZNL6 1462 aa18.36■□□□□ 0.53
KCNAB3-202ENST00000570587 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
KCNAB3-202ENST00000570587 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
KCNAB3-202ENST00000570587 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
KCNAB3-202ENST00000570587 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
KCNAB3-202ENST00000570587 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
KCNAB3-202ENST00000570587 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
KCNAB3-202ENST00000570587 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
KCNAB3-202ENST00000570587 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
KCNAB3-202ENST00000570587 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.51
KCNAB3-202ENST00000570587 ZBED9Q6R2W3 1325 aa18.24■□□□□ 0.51
KCNAB3-202ENST00000570587 MAP3K1Q13233 1512 aa18.23■□□□□ 0.51
KCNAB3-202ENST00000570587 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
KCNAB3-202ENST00000570587 PKNOX2Q96KN3 472 aa18.22■□□□□ 0.51
KCNAB3-202ENST00000570587 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
KCNAB3-202ENST00000570587 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
KCNAB3-202ENST00000570587 LAMC3Q9Y6N6 1575 aa18.18■□□□□ 0.5
KCNAB3-202ENST00000570587 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
KCNAB3-202ENST00000570587 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
KCNAB3-202ENST00000570587 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
KCNAB3-202ENST00000570587 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
KCNAB3-202ENST00000570587 NEFMP07197 916 aa18.16■□□□□ 0.5
KCNAB3-202ENST00000570587 PLEKHG5O94827 1062 aa18.14■□□□□ 0.5
KCNAB3-202ENST00000570587 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
KCNAB3-202ENST00000570587 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
KCNAB3-202ENST00000570587 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
KCNAB3-202ENST00000570587 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
KCNAB3-202ENST00000570587 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
KCNAB3-202ENST00000570587 RNF123Q5XPI4 1314 aa18.11■□□□□ 0.49
KCNAB3-202ENST00000570587 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
KCNAB3-202ENST00000570587 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
KCNAB3-202ENST00000570587 SMG6Q86US8 1419 aaKnown RBP18.1■□□□□ 0.49
KCNAB3-202ENST00000570587 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
KCNAB3-202ENST00000570587 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
KCNAB3-202ENST00000570587 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
KCNAB3-202ENST00000570587 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
KCNAB3-202ENST00000570587 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
KCNAB3-202ENST00000570587 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
KCNAB3-202ENST00000570587 KDM5BQ9UGL1 1544 aa18.05■□□□□ 0.48
KCNAB3-202ENST00000570587 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 GSE1Q14687 1217 aa18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 PRKRIP1Q9H875 184 aaPredicted RBP18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 DAXXQ9UER7 740 aaPredicted RBP18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
KCNAB3-202ENST00000570587 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
KCNAB3-202ENST00000570587 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
KCNAB3-202ENST00000570587 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.48
KCNAB3-202ENST00000570587 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
KCNAB3-202ENST00000570587 FHOD3Q2V2M9 1422 aa18.01■□□□□ 0.47
KCNAB3-202ENST00000570587 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
KCNAB3-202ENST00000570587 NUDCQ9Y266 331 aa18■□□□□ 0.47
KCNAB3-202ENST00000570587 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
KCNAB3-202ENST00000570587 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
KCNAB3-202ENST00000570587 HSPA5P11021 654 aaKnown RBP17.99■□□□□ 0.47
KCNAB3-202ENST00000570587 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
KCNAB3-202ENST00000570587 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
KCNAB3-202ENST00000570587 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms