RNA–Protein interactions for RNA: ENST00000569800.5

UTP4-216, Transcript of UTP4, small subunit processome component, humanhuman

TSL 4

Gene UTP4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-216ENST00000569800 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
UTP4-216ENST00000569800 PBRM1Q86U86 1689 aa16.7■□□□□ 0.26
UTP4-216ENST00000569800 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
UTP4-216ENST00000569800 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
UTP4-216ENST00000569800 PPRC1Q5VV67 1664 aaKnown RBP16.67■□□□□ 0.26
UTP4-216ENST00000569800 ADCY10Q96PN6 1610 aa16.64■□□□□ 0.25
UTP4-216ENST00000569800 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
UTP4-216ENST00000569800 NUP160Q12769 1436 aa16.62■□□□□ 0.25
UTP4-216ENST00000569800 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
UTP4-216ENST00000569800 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
UTP4-216ENST00000569800 PCF11O94913 1555 aaKnown RBP16.59■□□□□ 0.25
UTP4-216ENST00000569800 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
UTP4-216ENST00000569800 PTPRMP28827 1452 aa16.52■□□□□ 0.23
UTP4-216ENST00000569800 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
UTP4-216ENST00000569800 GLI2P10070 1586 aa16.48■□□□□ 0.23
UTP4-216ENST00000569800 HSPA2P54652 639 aa16.46■□□□□ 0.23
UTP4-216ENST00000569800 KIF21BO75037 1637 aa16.45■□□□□ 0.22
UTP4-216ENST00000569800 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
UTP4-216ENST00000569800 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
UTP4-216ENST00000569800 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
UTP4-216ENST00000569800 ADAMTSL3P82987 1691 aa16.39■□□□□ 0.21
UTP4-216ENST00000569800 ASXL2Q76L83 1435 aa16.38■□□□□ 0.21
UTP4-216ENST00000569800 CUX1P39880 1505 aa16.36■□□□□ 0.21
UTP4-216ENST00000569800 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
UTP4-216ENST00000569800 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
UTP4-216ENST00000569800 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
UTP4-216ENST00000569800 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
UTP4-216ENST00000569800 EPRSP07814 1512 aaKnown RBP16.26■□□□□ 0.19
UTP4-216ENST00000569800 ABCC2Q92887 1545 aa16.26■□□□□ 0.19
UTP4-216ENST00000569800 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
UTP4-216ENST00000569800 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
UTP4-216ENST00000569800 CUL7Q14999 1698 aa16.23■□□□□ 0.19
UTP4-216ENST00000569800 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
UTP4-216ENST00000569800 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
UTP4-216ENST00000569800 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
UTP4-216ENST00000569800 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
UTP4-216ENST00000569800 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
UTP4-216ENST00000569800 RIMS1Q86UR5 1692 aaKnown RBP16.17■□□□□ 0.18
UTP4-216ENST00000569800 PTPRGP23470 1445 aa16.16■□□□□ 0.18
UTP4-216ENST00000569800 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
UTP4-216ENST00000569800 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
UTP4-216ENST00000569800 IQSEC2Q5JU85 1478 aa16.1■□□□□ 0.17
UTP4-216ENST00000569800 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
UTP4-216ENST00000569800 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
UTP4-216ENST00000569800 STRCQ7RTU9 1775 aa16.09■□□□□ 0.17
UTP4-216ENST00000569800 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
UTP4-216ENST00000569800 MAGI3Q5TCQ9 1506 aa16.06■□□□□ 0.16
UTP4-216ENST00000569800 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
UTP4-216ENST00000569800 UHRF1BP1LA0JNW5 1464 aa16.04■□□□□ 0.16
UTP4-216ENST00000569800 CD109Q6YHK3 1445 aa16.04■□□□□ 0.16
UTP4-216ENST00000569800 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
UTP4-216ENST00000569800 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
UTP4-216ENST00000569800 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
UTP4-216ENST00000569800 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
UTP4-216ENST00000569800 TNIKQ9UKE5 1360 aa15.99■□□□□ 0.15
UTP4-216ENST00000569800 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
UTP4-216ENST00000569800 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
UTP4-216ENST00000569800 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
UTP4-216ENST00000569800 PTPRTO14522 1441 aa15.96■□□□□ 0.15
UTP4-216ENST00000569800 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
UTP4-216ENST00000569800 HSPA1LP34931 641 aa15.96■□□□□ 0.15
UTP4-216ENST00000569800 WDR7Q9Y4E6 1490 aa15.95■□□□□ 0.14
UTP4-216ENST00000569800 PREX1Q8TCU6 1659 aa15.94■□□□□ 0.14
UTP4-216ENST00000569800 RAPGEF3O95398 923 aa15.9■□□□□ 0.14
UTP4-216ENST00000569800 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
UTP4-216ENST00000569800 CARMIL2Q6F5E8 1435 aa15.88■□□□□ 0.13
UTP4-216ENST00000569800 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
UTP4-216ENST00000569800 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
UTP4-216ENST00000569800 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
UTP4-216ENST00000569800 POGZQ7Z3K3 1410 aa15.81■□□□□ 0.12
UTP4-216ENST00000569800 PIP4K2BP78356 416 aa15.79■□□□□ 0.12
UTP4-216ENST00000569800 RGS17Q9UGC6 210 aaPredicted RBP15.79■□□□□ 0.12
UTP4-216ENST00000569800 SRCAPQ6ZRS2 3230 aa15.78■□□□□ 0.12
UTP4-216ENST00000569800 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.12
UTP4-216ENST00000569800 PHLDB1Q86UU1 1377 aa15.77■□□□□ 0.12
UTP4-216ENST00000569800 MLECQ14165 292 aa15.77■□□□□ 0.12
UTP4-216ENST00000569800 FRMPD1Q5SYB0 1578 aa15.77■□□□□ 0.11
UTP4-216ENST00000569800 ARHGEF40Q8TER5 1519 aa15.77■□□□□ 0.11
UTP4-216ENST00000569800 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
UTP4-216ENST00000569800 FANCAO15360 1455 aa15.75■□□□□ 0.11
UTP4-216ENST00000569800 ZNF335Q9H4Z2 1342 aaPredicted RBP15.74■□□□□ 0.11
UTP4-216ENST00000569800 SETD1BQ9UPS6 1966 aaKnown RBP15.74■□□□□ 0.11
UTP4-216ENST00000569800 SIGLEC1Q9BZZ2 1709 aa15.72■□□□□ 0.11
UTP4-216ENST00000569800 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
UTP4-216ENST00000569800 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
UTP4-216ENST00000569800 SETD1AO15047 1707 aaKnown RBP15.66■□□□□ 0.1
UTP4-216ENST00000569800 TOM1O60784 492 aa15.66■□□□□ 0.1
UTP4-216ENST00000569800 NCOA1Q15788 1441 aa15.66■□□□□ 0.1
UTP4-216ENST00000569800 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
UTP4-216ENST00000569800 NEO1Q92859 1461 aa15.65■□□□□ 0.1
UTP4-216ENST00000569800 POTEAQ6S8J7 498 aa15.64■□□□□ 0.09
UTP4-216ENST00000569800 IQGAP2Q13576 1575 aa15.62■□□□□ 0.09
UTP4-216ENST00000569800 ARHGEF12Q9NZN5 1544 aa15.61■□□□□ 0.09
UTP4-216ENST00000569800 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
UTP4-216ENST00000569800 RICTORQ6R327 1708 aa15.58■□□□□ 0.08
UTP4-216ENST00000569800 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
UTP4-216ENST00000569800 UPF1Q92900 1129 aaKnown RBP eCLIP15.57■□□□□ 0.08
UTP4-216ENST00000569800 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
UTP4-216ENST00000569800 ZFYVE16Q7Z3T8 1539 aa15.55■□□□□ 0.08
UTP4-216ENST00000569800 NCKAP5LQ9HCH0 1330 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms