RNA–Protein interactions for RNA: ENST00000569540.5

TMEM170A-207, Transcript of transmembrane protein 170A, humanhuman

TSL 2 BASIC

Gene TMEM170A, Length 2,331 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-207ENST00000569540 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
TMEM170A-207ENST00000569540 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
TMEM170A-207ENST00000569540 KIAA0586Q9BVV6 1533 aa24.8■■□□□ 1.56
TMEM170A-207ENST00000569540 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
TMEM170A-207ENST00000569540 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
TMEM170A-207ENST00000569540 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
TMEM170A-207ENST00000569540 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
TMEM170A-207ENST00000569540 IQGAP2Q13576 1575 aa24.68■■□□□ 1.54
TMEM170A-207ENST00000569540 KIF21BO75037 1637 aa24.62■■□□□ 1.53
TMEM170A-207ENST00000569540 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
TMEM170A-207ENST00000569540 UGGT2Q9NYU1 1516 aa24.61■■□□□ 1.53
TMEM170A-207ENST00000569540 PRG4Q92954 1404 aaPredicted RBP24.59■■□□□ 1.53
TMEM170A-207ENST00000569540 JPH4Q96JJ6 628 aa24.58■■□□□ 1.53
TMEM170A-207ENST00000569540 CSRNP3Q8WYN3 585 aa24.57■■□□□ 1.52
TMEM170A-207ENST00000569540 CARMIL2Q6F5E8 1435 aa24.48■■□□□ 1.51
TMEM170A-207ENST00000569540 KIAA0556O60303 1618 aa24.46■■□□□ 1.51
TMEM170A-207ENST00000569540 DISP1Q96F81 1524 aa24.46■■□□□ 1.51
TMEM170A-207ENST00000569540 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
TMEM170A-207ENST00000569540 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
TMEM170A-207ENST00000569540 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.5
TMEM170A-207ENST00000569540 SAMD9Q5K651 1589 aa24.38■■□□□ 1.49
TMEM170A-207ENST00000569540 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
TMEM170A-207ENST00000569540 UHRF1BP1LA0JNW5 1464 aa24.34■■□□□ 1.49
TMEM170A-207ENST00000569540 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.48
TMEM170A-207ENST00000569540 PTPRGP23470 1445 aa24.3■■□□□ 1.48
TMEM170A-207ENST00000569540 EFCAB5A4FU69 1503 aa24.29■■□□□ 1.48
TMEM170A-207ENST00000569540 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
TMEM170A-207ENST00000569540 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
TMEM170A-207ENST00000569540 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
TMEM170A-207ENST00000569540 UACAQ9BZF9 1416 aa24.21■■□□□ 1.47
TMEM170A-207ENST00000569540 ABCA8O94911 1581 aa24.21■■□□□ 1.47
TMEM170A-207ENST00000569540 KDM5BQ9UGL1 1544 aa24.16■■□□□ 1.46
TMEM170A-207ENST00000569540 KIF13AQ9H1H9 1805 aa24.1■■□□□ 1.45
TMEM170A-207ENST00000569540 ZCCHC11Q5TAX3 1644 aaKnown RBP24.09■■□□□ 1.45
TMEM170A-207ENST00000569540 RAPGEF6Q8TEU7 1601 aa24.07■■□□□ 1.44
TMEM170A-207ENST00000569540 DIP2BQ9P265 1576 aa24.05■■□□□ 1.44
TMEM170A-207ENST00000569540 ABCC10Q5T3U5 1492 aa24.05■■□□□ 1.44
TMEM170A-207ENST00000569540 NPM1P06748 294 aaKnown RBP eCLIP24.05■■□□□ 1.44
TMEM170A-207ENST00000569540 PLB1Q6P1J6 1458 aa24.04■■□□□ 1.44
TMEM170A-207ENST00000569540 GLI2P10070 1586 aa24.03■■□□□ 1.44
TMEM170A-207ENST00000569540 CEP162Q5TB80 1403 aa24.02■■□□□ 1.44
TMEM170A-207ENST00000569540 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
TMEM170A-207ENST00000569540 FHOD3Q2V2M9 1422 aa23.96■■□□□ 1.43
TMEM170A-207ENST00000569540 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
TMEM170A-207ENST00000569540 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
TMEM170A-207ENST00000569540 WDR7Q9Y4E6 1490 aa23.91■■□□□ 1.42
TMEM170A-207ENST00000569540 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
TMEM170A-207ENST00000569540 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
TMEM170A-207ENST00000569540 CLIP1P30622 1438 aa23.88■■□□□ 1.41
TMEM170A-207ENST00000569540 ATP10BO94823 1461 aa23.88■■□□□ 1.41
TMEM170A-207ENST00000569540 MAP3K4Q9Y6R4 1608 aa23.88■■□□□ 1.41
TMEM170A-207ENST00000569540 EPRSP07814 1512 aaKnown RBP23.87■■□□□ 1.41
TMEM170A-207ENST00000569540 TRHP20396 242 aaPredicted RBP23.87■■□□□ 1.41
TMEM170A-207ENST00000569540 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
TMEM170A-207ENST00000569540 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
TMEM170A-207ENST00000569540 P3H3Q8IVL6 736 aa23.82■■□□□ 1.4
TMEM170A-207ENST00000569540 TTBK1Q5TCY1 1321 aaPredicted RBP23.81■■□□□ 1.4
TMEM170A-207ENST00000569540 PPRC1Q5VV67 1664 aaKnown RBP23.81■■□□□ 1.4
TMEM170A-207ENST00000569540 ABCA9Q8IUA7 1624 aa23.77■■□□□ 1.4
TMEM170A-207ENST00000569540 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
TMEM170A-207ENST00000569540 FYCO1Q9BQS8 1478 aa23.76■■□□□ 1.39
TMEM170A-207ENST00000569540 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
TMEM170A-207ENST00000569540 PCF11O94913 1555 aaKnown RBP23.74■■□□□ 1.39
TMEM170A-207ENST00000569540 CCDC18Q5T9S5 1454 aa23.73■■□□□ 1.39
TMEM170A-207ENST00000569540 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
TMEM170A-207ENST00000569540 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
TMEM170A-207ENST00000569540 TEX14Q8IWB6 1497 aa23.71■■□□□ 1.39
TMEM170A-207ENST00000569540 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
TMEM170A-207ENST00000569540 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
TMEM170A-207ENST00000569540 KDM6BO15054 1643 aa23.6■■□□□ 1.37
TMEM170A-207ENST00000569540 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
TMEM170A-207ENST00000569540 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
TMEM170A-207ENST00000569540 CFAP74Q9C0B2 1584 aa23.59■■□□□ 1.37
TMEM170A-207ENST00000569540 PHLDB1Q86UU1 1377 aa23.59■■□□□ 1.37
TMEM170A-207ENST00000569540 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.36
TMEM170A-207ENST00000569540 PLEKHD1A6NEE1 506 aa23.58■■□□□ 1.36
TMEM170A-207ENST00000569540 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.36
TMEM170A-207ENST00000569540 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
TMEM170A-207ENST00000569540 KIF14Q15058 1648 aa23.57■■□□□ 1.36
TMEM170A-207ENST00000569540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.57■■□□□ 1.366e-6■■■■□ 21.5
TMEM170A-207ENST00000569540 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
TMEM170A-207ENST00000569540 NEO1Q92859 1461 aa23.55■■□□□ 1.36
TMEM170A-207ENST00000569540 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
TMEM170A-207ENST00000569540 TTC37Q6PGP7 1564 aa23.53■■□□□ 1.36
TMEM170A-207ENST00000569540 APLP2Q06481 763 aa23.53■■□□□ 1.36
TMEM170A-207ENST00000569540 MYO5CQ9NQX4 1742 aa23.51■■□□□ 1.35
TMEM170A-207ENST00000569540 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
TMEM170A-207ENST00000569540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.47■■□□□ 1.35
TMEM170A-207ENST00000569540 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
TMEM170A-207ENST00000569540 KCNH8Q96L42 1107 aa23.45■■□□□ 1.35
TMEM170A-207ENST00000569540 ARID3CA6NKF2 412 aa23.45■■□□□ 1.34
TMEM170A-207ENST00000569540 EHBP1L1Q8N3D4 1523 aa23.45■■□□□ 1.34
TMEM170A-207ENST00000569540 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
TMEM170A-207ENST00000569540 PLCH2O75038 1416 aa23.42■■□□□ 1.34
TMEM170A-207ENST00000569540 TIAM1Q13009 1591 aa23.41■■□□□ 1.34
TMEM170A-207ENST00000569540 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
TMEM170A-207ENST00000569540 CDC42BPAQ5VT25 1732 aa23.38■■□□□ 1.33
TMEM170A-207ENST00000569540 COL17A1Q9UMD9 1497 aaPredicted RBP23.37■■□□□ 1.33
TMEM170A-207ENST00000569540 CDC42BPBQ9Y5S2 1711 aa23.37■■□□□ 1.33
TMEM170A-207ENST00000569540 FANCAO15360 1455 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms