RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 EHMT2Q96KQ7 1210 aa25.71■■□□□ 1.71
SPG7-218ENST00000568205 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
SPG7-218ENST00000568205 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
SPG7-218ENST00000568205 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
SPG7-218ENST00000568205 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.68
SPG7-218ENST00000568205 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
SPG7-218ENST00000568205 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
SPG7-218ENST00000568205 DNAJC5Q9H3Z4 198 aa25.53■■□□□ 1.68
SPG7-218ENST00000568205 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
SPG7-218ENST00000568205 PRG4Q92954 1404 aaPredicted RBP25.51■■□□□ 1.67
SPG7-218ENST00000568205 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
SPG7-218ENST00000568205 ARHGEF11O15085 1522 aa25.45■■□□□ 1.66
SPG7-218ENST00000568205 CARMIL2Q6F5E8 1435 aa25.43■■□□□ 1.66
SPG7-218ENST00000568205 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
SPG7-218ENST00000568205 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
SPG7-218ENST00000568205 DISP1Q96F81 1524 aa25.42■■□□□ 1.66
SPG7-218ENST00000568205 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
SPG7-218ENST00000568205 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
SPG7-218ENST00000568205 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
SPG7-218ENST00000568205 KIAA0556O60303 1618 aa25.36■■□□□ 1.65
SPG7-218ENST00000568205 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
SPG7-218ENST00000568205 EFCAB5A4FU69 1503 aa25.34■■□□□ 1.65
SPG7-218ENST00000568205 CLIP1P30622 1438 aa25.31■■□□□ 1.64
SPG7-218ENST00000568205 CEP162Q5TB80 1403 aa25.3■■□□□ 1.64
SPG7-218ENST00000568205 P3H3Q8IVL6 736 aa25.3■■□□□ 1.64
SPG7-218ENST00000568205 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
SPG7-218ENST00000568205 ARHGAP35Q9NRY4 1499 aa25.29■■□□□ 1.64
SPG7-218ENST00000568205 PTPRGP23470 1445 aa25.27■■□□□ 1.64
SPG7-218ENST00000568205 FHOD3Q2V2M9 1422 aa25.26■■□□□ 1.63
SPG7-218ENST00000568205 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
SPG7-218ENST00000568205 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
SPG7-218ENST00000568205 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
SPG7-218ENST00000568205 UACAQ9BZF9 1416 aa25.11■■□□□ 1.61
SPG7-218ENST00000568205 PLB1Q6P1J6 1458 aa25.09■■□□□ 1.61
SPG7-218ENST00000568205 ABCA8O94911 1581 aa25.06■■□□□ 1.6
SPG7-218ENST00000568205 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
SPG7-218ENST00000568205 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
SPG7-218ENST00000568205 ADCY10Q96PN6 1610 aa25.01■■□□□ 1.59
SPG7-218ENST00000568205 RAPGEF6Q8TEU7 1601 aa25■■□□□ 1.59
SPG7-218ENST00000568205 VPS8Q8N3P4 1428 aa24.97■■□□□ 1.59
SPG7-218ENST00000568205 CASKIN1Q8WXD9 1431 aa24.97■■□□□ 1.59
SPG7-218ENST00000568205 NUP153P49790 1475 aaKnown RBP24.96■■□□□ 1.59
SPG7-218ENST00000568205 PCF11O94913 1555 aaKnown RBP24.94■■□□□ 1.58
SPG7-218ENST00000568205 FYCO1Q9BQS8 1478 aa24.93■■□□□ 1.58
SPG7-218ENST00000568205 KDM5BQ9UGL1 1544 aa24.92■■□□□ 1.58
SPG7-218ENST00000568205 NPM1P06748 294 aaKnown RBP eCLIP24.92■■□□□ 1.58
SPG7-218ENST00000568205 ATP1B4Q9UN42 357 aaPredicted RBP24.92■■□□□ 1.58
SPG7-218ENST00000568205 HECW1Q76N89 1606 aa24.91■■□□□ 1.58
SPG7-218ENST00000568205 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
SPG7-218ENST00000568205 ATP10BO94823 1461 aa24.87■■□□□ 1.57
SPG7-218ENST00000568205 EPRSP07814 1512 aaKnown RBP24.85■■□□□ 1.57
SPG7-218ENST00000568205 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.56
SPG7-218ENST00000568205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
SPG7-218ENST00000568205 HNRNPUL2Q1KMD3 747 aaKnown RBP24.82■■□□□ 1.56
SPG7-218ENST00000568205 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
SPG7-218ENST00000568205 CCDC18Q5T9S5 1454 aa24.81■■□□□ 1.56
SPG7-218ENST00000568205 MAPKBP1O60336 1514 aa24.78■■□□□ 1.56
SPG7-218ENST00000568205 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
SPG7-218ENST00000568205 LRRIQ1Q96JM4 1722 aa24.73■■□□□ 1.55
SPG7-218ENST00000568205 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
SPG7-218ENST00000568205 WDR7Q9Y4E6 1490 aa24.71■■□□□ 1.55
SPG7-218ENST00000568205 PLEKHD1A6NEE1 506 aa24.71■■□□□ 1.55
SPG7-218ENST00000568205 APLP2Q06481 763 aa24.68■■□□□ 1.54
SPG7-218ENST00000568205 MAP3K1Q13233 1512 aa24.67■■□□□ 1.54
SPG7-218ENST00000568205 TIAM1Q13009 1591 aa24.67■■□□□ 1.54
SPG7-218ENST00000568205 CFAP43Q8NDM7 1665 aa24.65■■□□□ 1.54
SPG7-218ENST00000568205 TROQ12816 1431 aaPredicted RBP24.64■■□□□ 1.54
SPG7-218ENST00000568205 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
SPG7-218ENST00000568205 KCNH8Q96L42 1107 aa24.62■■□□□ 1.53
SPG7-218ENST00000568205 ABCC10Q5T3U5 1492 aa24.62■■□□□ 1.53
SPG7-218ENST00000568205 MTUS2Q5JR59 1369 aa24.61■■□□□ 1.53
SPG7-218ENST00000568205 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.52
SPG7-218ENST00000568205 EHBP1L1Q8N3D4 1523 aa24.57■■□□□ 1.52
SPG7-218ENST00000568205 DIP2BQ9P265 1576 aa24.57■■□□□ 1.52
SPG7-218ENST00000568205 FAM69CQ0P6D2 419 aa24.56■■□□□ 1.52
SPG7-218ENST00000568205 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
SPG7-218ENST00000568205 TRHP20396 242 aaPredicted RBP24.53■■□□□ 1.52
SPG7-218ENST00000568205 GLI2P10070 1586 aa24.53■■□□□ 1.52
SPG7-218ENST00000568205 KIF14Q15058 1648 aa24.51■■□□□ 1.51
SPG7-218ENST00000568205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.48■■□□□ 1.51
SPG7-218ENST00000568205 ABCA9Q8IUA7 1624 aa24.46■■□□□ 1.51
SPG7-218ENST00000568205 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
SPG7-218ENST00000568205 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
SPG7-218ENST00000568205 NCOA2Q15596 1464 aa24.44■■□□□ 1.5
SPG7-218ENST00000568205 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
SPG7-218ENST00000568205 MAP3K4Q9Y6R4 1608 aa24.41■■□□□ 1.5
SPG7-218ENST00000568205 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
SPG7-218ENST00000568205 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
SPG7-218ENST00000568205 CCNB3Q8WWL7 1395 aa24.39■■□□□ 1.49
SPG7-218ENST00000568205 PLCH2O75038 1416 aa24.36■■□□□ 1.49
SPG7-218ENST00000568205 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
SPG7-218ENST00000568205 ARAP3Q8WWN8 1544 aa24.32■■□□□ 1.48
SPG7-218ENST00000568205 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
SPG7-218ENST00000568205 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
SPG7-218ENST00000568205 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
SPG7-218ENST00000568205 PREX2Q70Z35 1606 aa24.29■■□□□ 1.48
SPG7-218ENST00000568205 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
SPG7-218ENST00000568205 ARHGAP5Q13017 1502 aa24.29■■□□□ 1.48
SPG7-218ENST00000568205 MYOM3Q5VTT5 1437 aa24.28■■□□□ 1.48
SPG7-218ENST00000568205 PPRC1Q5VV67 1664 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms