RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-208ENST00000567954 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
LYRM1-208ENST00000567954 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
LYRM1-208ENST00000567954 PRG4Q92954 1404 aaPredicted RBP14.56□□□□□ -0.08
LYRM1-208ENST00000567954 GRIN2AQ12879 1464 aa14.55□□□□□ -0.08
LYRM1-208ENST00000567954 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
LYRM1-208ENST00000567954 SHROOM2Q13796 1616 aa14.53□□□□□ -0.08
LYRM1-208ENST00000567954 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
LYRM1-208ENST00000567954 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
LYRM1-208ENST00000567954 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
LYRM1-208ENST00000567954 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
LYRM1-208ENST00000567954 PCF11O94913 1555 aaKnown RBP14.4□□□□□ -0.1
LYRM1-208ENST00000567954 PTPRMP28827 1452 aa14.4□□□□□ -0.1
LYRM1-208ENST00000567954 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
LYRM1-208ENST00000567954 GLI2P10070 1586 aa14.37□□□□□ -0.11
LYRM1-208ENST00000567954 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
LYRM1-208ENST00000567954 PLB1Q6P1J6 1458 aa14.34□□□□□ -0.11
LYRM1-208ENST00000567954 TEX14Q8IWB6 1497 aa14.34□□□□□ -0.11
LYRM1-208ENST00000567954 HSPA2P54652 639 aa14.34□□□□□ -0.11
LYRM1-208ENST00000567954 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
LYRM1-208ENST00000567954 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
LYRM1-208ENST00000567954 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
LYRM1-208ENST00000567954 CUX1P39880 1505 aa14.29□□□□□ -0.12
LYRM1-208ENST00000567954 ADAMTS12P58397 1594 aa14.29□□□□□ -0.12
LYRM1-208ENST00000567954 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
LYRM1-208ENST00000567954 ABCC2Q92887 1545 aa14.23□□□□□ -0.13
LYRM1-208ENST00000567954 EPRSP07814 1512 aaKnown RBP14.21□□□□□ -0.13
LYRM1-208ENST00000567954 PTPRGP23470 1445 aa14.19□□□□□ -0.14
LYRM1-208ENST00000567954 ADAMTSL3P82987 1691 aa14.18□□□□□ -0.14
LYRM1-208ENST00000567954 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
LYRM1-208ENST00000567954 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
LYRM1-208ENST00000567954 MAP3K4Q9Y6R4 1608 aa14.16□□□□□ -0.14
LYRM1-208ENST00000567954 KIF21BO75037 1637 aa14.15□□□□□ -0.14
LYRM1-208ENST00000567954 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
LYRM1-208ENST00000567954 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
LYRM1-208ENST00000567954 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.15
LYRM1-208ENST00000567954 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.16
LYRM1-208ENST00000567954 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.16
LYRM1-208ENST00000567954 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
LYRM1-208ENST00000567954 UHRF1BP1LA0JNW5 1464 aa14.06□□□□□ -0.16
LYRM1-208ENST00000567954 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
LYRM1-208ENST00000567954 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
LYRM1-208ENST00000567954 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
LYRM1-208ENST00000567954 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
LYRM1-208ENST00000567954 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
LYRM1-208ENST00000567954 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
LYRM1-208ENST00000567954 UACAQ9BZF9 1416 aa14.02□□□□□ -0.16
LYRM1-208ENST00000567954 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
LYRM1-208ENST00000567954 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
LYRM1-208ENST00000567954 ARAP3Q8WWN8 1544 aa13.99□□□□□ -0.17
LYRM1-208ENST00000567954 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
LYRM1-208ENST00000567954 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
LYRM1-208ENST00000567954 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
LYRM1-208ENST00000567954 PTPRTO14522 1441 aa13.96□□□□□ -0.18
LYRM1-208ENST00000567954 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.18
LYRM1-208ENST00000567954 CUL7Q14999 1698 aa13.95□□□□□ -0.18
LYRM1-208ENST00000567954 WDR7Q9Y4E6 1490 aa13.95□□□□□ -0.18
LYRM1-208ENST00000567954 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
LYRM1-208ENST00000567954 RAPGEF3O95398 923 aa13.93□□□□□ -0.18
LYRM1-208ENST00000567954 HSPA1LP34931 641 aa13.91□□□□□ -0.18
LYRM1-208ENST00000567954 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
LYRM1-208ENST00000567954 PHLDB1Q86UU1 1377 aa13.91□□□□□ -0.18
LYRM1-208ENST00000567954 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
LYRM1-208ENST00000567954 POGZQ7Z3K3 1410 aa13.85□□□□□ -0.19
LYRM1-208ENST00000567954 STRCQ7RTU9 1775 aa13.84□□□□□ -0.19
LYRM1-208ENST00000567954 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.19
LYRM1-208ENST00000567954 CFAP43Q8NDM7 1665 aa13.83□□□□□ -0.2
LYRM1-208ENST00000567954 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
LYRM1-208ENST00000567954 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
LYRM1-208ENST00000567954 RGS17Q9UGC6 210 aaPredicted RBP13.78□□□□□ -0.2
LYRM1-208ENST00000567954 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.21
LYRM1-208ENST00000567954 MLECQ14165 292 aa13.77□□□□□ -0.21
LYRM1-208ENST00000567954 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.21
LYRM1-208ENST00000567954 PIP4K2BP78356 416 aa13.76□□□□□ -0.21
LYRM1-208ENST00000567954 FANCAO15360 1455 aa13.75□□□□□ -0.21
LYRM1-208ENST00000567954 ZNF335Q9H4Z2 1342 aaPredicted RBP13.74□□□□□ -0.21
LYRM1-208ENST00000567954 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
LYRM1-208ENST00000567954 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
LYRM1-208ENST00000567954 TOM1O60784 492 aa13.72□□□□□ -0.21
LYRM1-208ENST00000567954 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
LYRM1-208ENST00000567954 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
LYRM1-208ENST00000567954 IGF1RP08069 1367 aa13.71□□□□□ -0.21
LYRM1-208ENST00000567954 NEO1Q92859 1461 aa13.71□□□□□ -0.21
LYRM1-208ENST00000567954 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
LYRM1-208ENST00000567954 FRMPD1Q5SYB0 1578 aa13.67□□□□□ -0.22
LYRM1-208ENST00000567954 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
LYRM1-208ENST00000567954 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
LYRM1-208ENST00000567954 FHOD3Q2V2M9 1422 aa13.63□□□□□ -0.23
LYRM1-208ENST00000567954 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
LYRM1-208ENST00000567954 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
LYRM1-208ENST00000567954 ARHGEF12Q9NZN5 1544 aa13.61□□□□□ -0.23
LYRM1-208ENST00000567954 IQGAP2Q13576 1575 aa13.61□□□□□ -0.23
LYRM1-208ENST00000567954 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
LYRM1-208ENST00000567954 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
LYRM1-208ENST00000567954 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
LYRM1-208ENST00000567954 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
LYRM1-208ENST00000567954 MAGI2Q86UL8 1455 aa13.56□□□□□ -0.24
LYRM1-208ENST00000567954 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
LYRM1-208ENST00000567954 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
LYRM1-208ENST00000567954 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
LYRM1-208ENST00000567954 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms