RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 KIAA0586Q9BVV6 1533 aa37.14■■■■□ 3.54
UBFD1-208ENST00000567264 CTTNBP2Q8WZ74 1663 aa37.07■■■■□ 3.52
UBFD1-208ENST00000567264 UBTFP17480 764 aaKnown RBP37.05■■■■□ 3.52
UBFD1-208ENST00000567264 IQGAP2Q13576 1575 aa37.04■■■■□ 3.52
UBFD1-208ENST00000567264 JPH4Q96JJ6 628 aa36.97■■■■□ 3.51
UBFD1-208ENST00000567264 DNAJC5Q9H3Z4 198 aa36.96■■■■□ 3.51
UBFD1-208ENST00000567264 SHROOM2Q13796 1616 aa36.96■■■■□ 3.51
UBFD1-208ENST00000567264 PRG4Q92954 1404 aaPredicted RBP36.85■■■■□ 3.49
UBFD1-208ENST00000567264 UGGT2Q9NYU1 1516 aa36.85■■■■□ 3.49
UBFD1-208ENST00000567264 ARHGEF11O15085 1522 aa36.82■■■■□ 3.48
UBFD1-208ENST00000567264 LOC105371045A0A1W2PR82 267 aa36.82■■■■□ 3.48
UBFD1-208ENST00000567264 TNIKQ9UKE5 1360 aa36.79■■■■□ 3.48
UBFD1-208ENST00000567264 CARMIL2Q6F5E8 1435 aa36.76■■■■□ 3.48
UBFD1-208ENST00000567264 RIMBP3CA6NJZ7 1639 aa36.75■■■■□ 3.47
UBFD1-208ENST00000567264 RIMBP3BA6NNM3 1639 aa36.75■■■■□ 3.47
UBFD1-208ENST00000567264 RIMBP3Q9UFD9 1639 aa36.75■■■■□ 3.47
UBFD1-208ENST00000567264 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
UBFD1-208ENST00000567264 RANGAP1P46060 587 aaPredicted RBP36.74■■■■□ 3.47
UBFD1-208ENST00000567264 DISP1Q96F81 1524 aa36.69■■■■□ 3.46
UBFD1-208ENST00000567264 KIAA0556O60303 1618 aa36.67■■■■□ 3.46
UBFD1-208ENST00000567264 SAMD9Q5K651 1589 aa36.62■■■■□ 3.45
UBFD1-208ENST00000567264 EFCAB5A4FU69 1503 aa36.61■■■■□ 3.45
UBFD1-208ENST00000567264 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
UBFD1-208ENST00000567264 P3H3Q8IVL6 736 aa36.56■■■■□ 3.44
UBFD1-208ENST00000567264 CLIP1P30622 1438 aa36.52■■■■□ 3.44
UBFD1-208ENST00000567264 TTBK1Q5TCY1 1321 aaPredicted RBP36.51■■■■□ 3.43
UBFD1-208ENST00000567264 PTPRGP23470 1445 aa36.51■■■■□ 3.43
UBFD1-208ENST00000567264 CEP162Q5TB80 1403 aa36.5■■■■□ 3.43
UBFD1-208ENST00000567264 ARHGAP35Q9NRY4 1499 aa36.5■■■■□ 3.43
UBFD1-208ENST00000567264 CYB5RLQ6IPT4 315 aa36.47■■■■□ 3.43
UBFD1-208ENST00000567264 FHOD3Q2V2M9 1422 aa36.46■■■■□ 3.43
UBFD1-208ENST00000567264 FMN1Q68DA7 1419 aa36.27■■■■□ 3.4
UBFD1-208ENST00000567264 UACAQ9BZF9 1416 aa36.27■■■■□ 3.4
UBFD1-208ENST00000567264 PLB1Q6P1J6 1458 aa36.24■■■■□ 3.39
UBFD1-208ENST00000567264 ABCA8O94911 1581 aa36.21■■■■□ 3.39
UBFD1-208ENST00000567264 ABCC2Q92887 1545 aa36.19■■■■□ 3.38
UBFD1-208ENST00000567264 UHRF1BP1LA0JNW5 1464 aa36.19■■■■□ 3.38
UBFD1-208ENST00000567264 ADCY10Q96PN6 1610 aa36.18■■■■□ 3.38
UBFD1-208ENST00000567264 RAPGEF6Q8TEU7 1601 aa36.16■■■■□ 3.38
UBFD1-208ENST00000567264 NPM1P06748 294 aaKnown RBP eCLIP36.09■■■■□ 3.37
UBFD1-208ENST00000567264 ATP1B4Q9UN42 357 aaPredicted RBP36.05■■■■□ 3.36
UBFD1-208ENST00000567264 PCF11O94913 1555 aaKnown RBP36.04■■■■□ 3.36
UBFD1-208ENST00000567264 CASKIN1Q8WXD9 1431 aa36.04■■■■□ 3.36
UBFD1-208ENST00000567264 HECW1Q76N89 1606 aa36.03■■■■□ 3.36
UBFD1-208ENST00000567264 VPS8Q8N3P4 1428 aa36.02■■■■□ 3.36
UBFD1-208ENST00000567264 NUP153P49790 1475 aaKnown RBP36.02■■■■□ 3.36
UBFD1-208ENST00000567264 KDM5BQ9UGL1 1544 aa36■■■■□ 3.35
UBFD1-208ENST00000567264 FYCO1Q9BQS8 1478 aa35.99■■■■□ 3.35
UBFD1-208ENST00000567264 ARID3CA6NKF2 412 aa35.98■■■■□ 3.35
UBFD1-208ENST00000567264 ZCCHC11Q5TAX3 1644 aaKnown RBP35.95■■■■□ 3.35
UBFD1-208ENST00000567264 ATP10BO94823 1461 aa35.92■■■■□ 3.34
UBFD1-208ENST00000567264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.91■■■■□ 3.34
UBFD1-208ENST00000567264 HNRNPUL2Q1KMD3 747 aaKnown RBP35.91■■■■□ 3.34
UBFD1-208ENST00000567264 EPRSP07814 1512 aaKnown RBP35.89■■■■□ 3.34
UBFD1-208ENST00000567264 CCDC18Q5T9S5 1454 aa35.85■■■■□ 3.33
UBFD1-208ENST00000567264 MAPKBP1O60336 1514 aa35.84■■■■□ 3.33
UBFD1-208ENST00000567264 CDK13Q14004 1512 aaKnown RBP35.84■■■■□ 3.33
UBFD1-208ENST00000567264 LRRIQ1Q96JM4 1722 aa35.8■■■■□ 3.32
UBFD1-208ENST00000567264 ASXL2Q76L83 1435 aa35.79■■■■□ 3.32
UBFD1-208ENST00000567264 CDK11AQ9UQ88 783 aaPredicted RBP35.74■■■■□ 3.31
UBFD1-208ENST00000567264 PLEKHD1A6NEE1 506 aa35.72■■■■□ 3.31
UBFD1-208ENST00000567264 WDR7Q9Y4E6 1490 aa35.72■■■■□ 3.31
UBFD1-208ENST00000567264 APLP2Q06481 763 aa35.68■■■■□ 3.3
UBFD1-208ENST00000567264 CFAP43Q8NDM7 1665 aa35.64■■■■□ 3.3
UBFD1-208ENST00000567264 TIAM1Q13009 1591 aa35.63■■■■□ 3.29
UBFD1-208ENST00000567264 MAP3K1Q13233 1512 aa35.61■■■■□ 3.29
UBFD1-208ENST00000567264 KCNH8Q96L42 1107 aa35.6■■■■□ 3.29
UBFD1-208ENST00000567264 ABCC10Q5T3U5 1492 aa35.6■■■■□ 3.29
UBFD1-208ENST00000567264 TROQ12816 1431 aaPredicted RBP35.58■■■■□ 3.29
UBFD1-208ENST00000567264 DIP2BQ9P265 1576 aa35.56■■■■□ 3.28
UBFD1-208ENST00000567264 MTUS2Q5JR59 1369 aa35.56■■■■□ 3.28
UBFD1-208ENST00000567264 TRHP20396 242 aaPredicted RBP35.56■■■■□ 3.28
UBFD1-208ENST00000567264 MAGI3Q5TCQ9 1506 aa35.54■■■■□ 3.28
UBFD1-208ENST00000567264 FAM69CQ0P6D2 419 aa35.53■■■■□ 3.28
UBFD1-208ENST00000567264 EHBP1L1Q8N3D4 1523 aa35.5■■■■□ 3.27
UBFD1-208ENST00000567264 GLI2P10070 1586 aa35.49■■■■□ 3.27
UBFD1-208ENST00000567264 KIF14Q15058 1648 aa35.47■■■■□ 3.27
UBFD1-208ENST00000567264 LRRC9Q6ZRR7 1453 aa35.47■■■■□ 3.27
UBFD1-208ENST00000567264 KIF13AQ9H1H9 1805 aa35.46■■■■□ 3.27
UBFD1-208ENST00000567264 KANK4Q5T7N3 995 aaPredicted RBP35.42■■■■□ 3.26
UBFD1-208ENST00000567264 ABCA9Q8IUA7 1624 aa35.39■■■■□ 3.26
UBFD1-208ENST00000567264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.38■■■■□ 3.25
UBFD1-208ENST00000567264 MAP3K4Q9Y6R4 1608 aa35.34■■■■□ 3.25
UBFD1-208ENST00000567264 SUPT6HQ7KZ85 1726 aaKnown RBP35.34■■■■□ 3.25
UBFD1-208ENST00000567264 TTC37Q6PGP7 1564 aa35.34■■■■□ 3.25
UBFD1-208ENST00000567264 CD109Q6YHK3 1445 aa35.32■■■■□ 3.25
UBFD1-208ENST00000567264 NCOA2Q15596 1464 aa35.28■■■■□ 3.24
UBFD1-208ENST00000567264 TSPOAP1O95153 1857 aa35.24■■■■□ 3.23
UBFD1-208ENST00000567264 CCNB3Q8WWL7 1395 aa35.23■■■■□ 3.23
UBFD1-208ENST00000567264 MYO5CQ9NQX4 1742 aa35.23■■■■□ 3.23
UBFD1-208ENST00000567264 PPARGC1BQ86YN6 1023 aaKnown RBP35.2■■■■□ 3.23
UBFD1-208ENST00000567264 PLCH2O75038 1416 aa35.19■■■■□ 3.22
UBFD1-208ENST00000567264 TEX14Q8IWB6 1497 aa35.18■■■■□ 3.22
UBFD1-208ENST00000567264 PPRC1Q5VV67 1664 aaKnown RBP35.16■■■■□ 3.22
UBFD1-208ENST00000567264 GPATCH8Q9UKJ3 1502 aaKnown RBP35.16■■■■□ 3.22
UBFD1-208ENST00000567264 CDC42BPAQ5VT25 1732 aa35.15■■■■□ 3.22
UBFD1-208ENST00000567264 PREX2Q70Z35 1606 aa35.14■■■■□ 3.22
UBFD1-208ENST00000567264 ARAP3Q8WWN8 1544 aa35.14■■■■□ 3.22
UBFD1-208ENST00000567264 ARHGAP5Q13017 1502 aa35.12■■■■□ 3.21
UBFD1-208ENST00000567264 ITSN2Q9NZM3 1697 aa35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms