RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
SF3B3-207ENST00000566095 KIAA0586Q9BVV6 1533 aa15.61■□□□□ 0.09
SF3B3-207ENST00000566095 NUP160Q12769 1436 aa15.6■□□□□ 0.09
SF3B3-207ENST00000566095 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
SF3B3-207ENST00000566095 CLIP1P30622 1438 aa15.59■□□□□ 0.09
SF3B3-207ENST00000566095 CHD1O14646 1710 aa15.58■□□□□ 0.08
SF3B3-207ENST00000566095 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.08
SF3B3-207ENST00000566095 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
SF3B3-207ENST00000566095 UGGT2Q9NYU1 1516 aa15.51■□□□□ 0.07
SF3B3-207ENST00000566095 CARMIL2Q6F5E8 1435 aa15.51■□□□□ 0.07
SF3B3-207ENST00000566095 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
SF3B3-207ENST00000566095 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
SF3B3-207ENST00000566095 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
SF3B3-207ENST00000566095 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
SF3B3-207ENST00000566095 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
SF3B3-207ENST00000566095 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
SF3B3-207ENST00000566095 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
SF3B3-207ENST00000566095 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
SF3B3-207ENST00000566095 KIAA0556O60303 1618 aa15.4■□□□□ 0.06
SF3B3-207ENST00000566095 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
SF3B3-207ENST00000566095 APLP2Q06481 763 aa15.4■□□□□ 0.06
SF3B3-207ENST00000566095 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
SF3B3-207ENST00000566095 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
SF3B3-207ENST00000566095 FHOD3Q2V2M9 1422 aa15.36■□□□□ 0.05
SF3B3-207ENST00000566095 DISP1Q96F81 1524 aa15.36■□□□□ 0.05
SF3B3-207ENST00000566095 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
SF3B3-207ENST00000566095 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.05
SF3B3-207ENST00000566095 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
SF3B3-207ENST00000566095 PTPRGP23470 1445 aa15.29■□□□□ 0.04
SF3B3-207ENST00000566095 HECW1Q76N89 1606 aa15.28■□□□□ 0.04
SF3B3-207ENST00000566095 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
SF3B3-207ENST00000566095 MAP3K1Q13233 1512 aa15.26■□□□□ 0.03
SF3B3-207ENST00000566095 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
SF3B3-207ENST00000566095 ATP1B4Q9UN42 357 aaPredicted RBP15.25■□□□□ 0.03
SF3B3-207ENST00000566095 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
SF3B3-207ENST00000566095 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
SF3B3-207ENST00000566095 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
SF3B3-207ENST00000566095 UACAQ9BZF9 1416 aa15.21■□□□□ 0.03
SF3B3-207ENST00000566095 ABCA8O94911 1581 aa15.19■□□□□ 0.02
SF3B3-207ENST00000566095 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
SF3B3-207ENST00000566095 CFAP43Q8NDM7 1665 aa15.17■□□□□ 0.02
SF3B3-207ENST00000566095 UHRF1BP1LA0JNW5 1464 aa15.17■□□□□ 0.02
SF3B3-207ENST00000566095 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
SF3B3-207ENST00000566095 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
SF3B3-207ENST00000566095 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
SF3B3-207ENST00000566095 EPRSP07814 1512 aaKnown RBP15.16■□□□□ 0.02
SF3B3-207ENST00000566095 ABCC2Q92887 1545 aa15.16■□□□□ 0.02
SF3B3-207ENST00000566095 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
SF3B3-207ENST00000566095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
SF3B3-207ENST00000566095 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
SF3B3-207ENST00000566095 NUP153P49790 1475 aaKnown RBP15.14■□□□□ 0.01
SF3B3-207ENST00000566095 MTUS2Q5JR59 1369 aa15.13■□□□□ 0.01
SF3B3-207ENST00000566095 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
SF3B3-207ENST00000566095 EHBP1L1Q8N3D4 1523 aa15.11■□□□□ 0.01
SF3B3-207ENST00000566095 LRRC9Q6ZRR7 1453 aa15.1■□□□□ 0.01
SF3B3-207ENST00000566095 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
SF3B3-207ENST00000566095 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
SF3B3-207ENST00000566095 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
SF3B3-207ENST00000566095 PLEKHD1A6NEE1 506 aa15.08■□□□□ 0
SF3B3-207ENST00000566095 CDK13Q14004 1512 aaKnown RBP15.06■□□□□ 0
SF3B3-207ENST00000566095 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
SF3B3-207ENST00000566095 ATP10BO94823 1461 aa15.05■□□□□ -0
SF3B3-207ENST00000566095 SUPT6HQ7KZ85 1726 aaKnown RBP15.05■□□□□ -0
SF3B3-207ENST00000566095 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
SF3B3-207ENST00000566095 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
SF3B3-207ENST00000566095 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
SF3B3-207ENST00000566095 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
SF3B3-207ENST00000566095 ZCCHC11Q5TAX3 1644 aaKnown RBP15.01□□□□□ -0.01
SF3B3-207ENST00000566095 KIF14Q15058 1648 aa15□□□□□ -0.01
SF3B3-207ENST00000566095 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
SF3B3-207ENST00000566095 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
SF3B3-207ENST00000566095 PPARGC1BQ86YN6 1023 aaKnown RBP14.97□□□□□ -0.01
SF3B3-207ENST00000566095 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
SF3B3-207ENST00000566095 WDR7Q9Y4E6 1490 aa14.95□□□□□ -0.02
SF3B3-207ENST00000566095 CCNB3Q8WWL7 1395 aa14.95□□□□□ -0.02
SF3B3-207ENST00000566095 ITSN2Q9NZM3 1697 aa14.93□□□□□ -0.02
SF3B3-207ENST00000566095 MYOM3Q5VTT5 1437 aa14.92□□□□□ -0.02
SF3B3-207ENST00000566095 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
SF3B3-207ENST00000566095 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
SF3B3-207ENST00000566095 ASXL2Q76L83 1435 aa14.92□□□□□ -0.02
SF3B3-207ENST00000566095 MIA2Q96PC5 1412 aa14.92□□□□□ -0.02
SF3B3-207ENST00000566095 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
SF3B3-207ENST00000566095 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
SF3B3-207ENST00000566095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.89□□□□□ -0.03
SF3B3-207ENST00000566095 PHLDB1Q86UU1 1377 aa14.87□□□□□ -0.03
SF3B3-207ENST00000566095 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
SF3B3-207ENST00000566095 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
SF3B3-207ENST00000566095 ABCC10Q5T3U5 1492 aa14.85□□□□□ -0.03
SF3B3-207ENST00000566095 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
SF3B3-207ENST00000566095 ARAP3Q8WWN8 1544 aa14.84□□□□□ -0.03
SF3B3-207ENST00000566095 MYO5CQ9NQX4 1742 aa14.83□□□□□ -0.03
SF3B3-207ENST00000566095 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.83□□□□□ -0.042e-7■□□□□ 10.7
SF3B3-207ENST00000566095 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
SF3B3-207ENST00000566095 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
SF3B3-207ENST00000566095 ABCA9Q8IUA7 1624 aa14.82□□□□□ -0.04
SF3B3-207ENST00000566095 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
SF3B3-207ENST00000566095 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
SF3B3-207ENST00000566095 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
SF3B3-207ENST00000566095 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
SF3B3-207ENST00000566095 EFCAB2Q5VUJ9 269 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms