RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
SHCBP1-204ENST00000565887 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
SHCBP1-204ENST00000565887 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
SHCBP1-204ENST00000565887 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
SHCBP1-204ENST00000565887 SHROOM2Q13796 1616 aa20.76■□□□□ 0.91
SHCBP1-204ENST00000565887 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
SHCBP1-204ENST00000565887 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
SHCBP1-204ENST00000565887 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
SHCBP1-204ENST00000565887 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
SHCBP1-204ENST00000565887 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
SHCBP1-204ENST00000565887 KIF21BO75037 1637 aa20.65■□□□□ 0.9
SHCBP1-204ENST00000565887 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
SHCBP1-204ENST00000565887 UGGT2Q9NYU1 1516 aa20.61■□□□□ 0.89
SHCBP1-204ENST00000565887 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
SHCBP1-204ENST00000565887 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
SHCBP1-204ENST00000565887 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
SHCBP1-204ENST00000565887 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.88
SHCBP1-204ENST00000565887 PTPRGP23470 1445 aa20.55■□□□□ 0.88
SHCBP1-204ENST00000565887 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
SHCBP1-204ENST00000565887 NPM1P06748 294 aaKnown RBP eCLIP20.49■□□□□ 0.87
SHCBP1-204ENST00000565887 KIAA0556O60303 1618 aa20.45■□□□□ 0.87
SHCBP1-204ENST00000565887 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
SHCBP1-204ENST00000565887 TTBK1Q5TCY1 1321 aaPredicted RBP20.43■□□□□ 0.86
SHCBP1-204ENST00000565887 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
SHCBP1-204ENST00000565887 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
SHCBP1-204ENST00000565887 P3H3Q8IVL6 736 aa20.39■□□□□ 0.85
SHCBP1-204ENST00000565887 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
SHCBP1-204ENST00000565887 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
SHCBP1-204ENST00000565887 SAMD9Q5K651 1589 aa20.37■□□□□ 0.85
SHCBP1-204ENST00000565887 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
SHCBP1-204ENST00000565887 ABCC2Q92887 1545 aa20.31■□□□□ 0.84
SHCBP1-204ENST00000565887 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
SHCBP1-204ENST00000565887 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
SHCBP1-204ENST00000565887 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
SHCBP1-204ENST00000565887 ABCA8O94911 1581 aa20.25■□□□□ 0.83
SHCBP1-204ENST00000565887 KDM5BQ9UGL1 1544 aa20.25■□□□□ 0.83
SHCBP1-204ENST00000565887 FMN1Q68DA7 1419 aa20.25■□□□□ 0.83
SHCBP1-204ENST00000565887 MAPKBP1O60336 1514 aa20.24■□□□□ 0.83
SHCBP1-204ENST00000565887 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
SHCBP1-204ENST00000565887 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
SHCBP1-204ENST00000565887 CLIP1P30622 1438 aa20.21■□□□□ 0.83
SHCBP1-204ENST00000565887 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
SHCBP1-204ENST00000565887 ASXL2Q76L83 1435 aa20.15■□□□□ 0.82
SHCBP1-204ENST00000565887 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
SHCBP1-204ENST00000565887 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
SHCBP1-204ENST00000565887 ZCCHC11Q5TAX3 1644 aaKnown RBP20.13■□□□□ 0.81
SHCBP1-204ENST00000565887 ATP10BO94823 1461 aa20.13■□□□□ 0.81
SHCBP1-204ENST00000565887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
SHCBP1-204ENST00000565887 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
SHCBP1-204ENST00000565887 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
SHCBP1-204ENST00000565887 PLEKHD1A6NEE1 506 aa20.1■□□□□ 0.81
SHCBP1-204ENST00000565887 ATP1B4Q9UN42 357 aaPredicted RBP20.1■□□□□ 0.81
SHCBP1-204ENST00000565887 NUP153P49790 1475 aaKnown RBP20.1■□□□□ 0.81
SHCBP1-204ENST00000565887 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
SHCBP1-204ENST00000565887 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
SHCBP1-204ENST00000565887 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
SHCBP1-204ENST00000565887 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
SHCBP1-204ENST00000565887 KCNH8Q96L42 1107 aa20.04■□□□□ 0.8
SHCBP1-204ENST00000565887 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
SHCBP1-204ENST00000565887 GLI2P10070 1586 aa20.04■□□□□ 0.8
SHCBP1-204ENST00000565887 DIP2BQ9P265 1576 aa20.03■□□□□ 0.8
SHCBP1-204ENST00000565887 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
SHCBP1-204ENST00000565887 KIF13AQ9H1H9 1805 aa20.01■□□□□ 0.79
SHCBP1-204ENST00000565887 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
SHCBP1-204ENST00000565887 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
SHCBP1-204ENST00000565887 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
SHCBP1-204ENST00000565887 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
SHCBP1-204ENST00000565887 PCF11O94913 1555 aaKnown RBP19.91■□□□□ 0.78
SHCBP1-204ENST00000565887 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
SHCBP1-204ENST00000565887 TEX14Q8IWB6 1497 aa19.9■□□□□ 0.78
SHCBP1-204ENST00000565887 CFAP43Q8NDM7 1665 aa19.88■□□□□ 0.77
SHCBP1-204ENST00000565887 MAP3K4Q9Y6R4 1608 aa19.88■□□□□ 0.77
SHCBP1-204ENST00000565887 TROQ12816 1431 aaPredicted RBP19.87■□□□□ 0.77
SHCBP1-204ENST00000565887 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
SHCBP1-204ENST00000565887 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
SHCBP1-204ENST00000565887 ABCA9Q8IUA7 1624 aa19.85■□□□□ 0.77
SHCBP1-204ENST00000565887 TSPOAP1O95153 1857 aa19.84■□□□□ 0.77
SHCBP1-204ENST00000565887 APLP2Q06481 763 aa19.83■□□□□ 0.77
SHCBP1-204ENST00000565887 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
SHCBP1-204ENST00000565887 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
SHCBP1-204ENST00000565887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHCBP1-204ENST00000565887 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
SHCBP1-204ENST00000565887 KIF14Q15058 1648 aa19.77■□□□□ 0.76
SHCBP1-204ENST00000565887 PPRC1Q5VV67 1664 aaKnown RBP19.77■□□□□ 0.76
SHCBP1-204ENST00000565887 PLCH2O75038 1416 aa19.76■□□□□ 0.75
SHCBP1-204ENST00000565887 NEO1Q92859 1461 aa19.75■□□□□ 0.75
SHCBP1-204ENST00000565887 EFCAB2Q5VUJ9 269 aa19.75■□□□□ 0.75
SHCBP1-204ENST00000565887 KDM6BO15054 1643 aa19.72■□□□□ 0.75
SHCBP1-204ENST00000565887 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
SHCBP1-204ENST00000565887 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
SHCBP1-204ENST00000565887 FANCAO15360 1455 aa19.69■□□□□ 0.74
SHCBP1-204ENST00000565887 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
SHCBP1-204ENST00000565887 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
SHCBP1-204ENST00000565887 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
SHCBP1-204ENST00000565887 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
SHCBP1-204ENST00000565887 MYO5CQ9NQX4 1742 aa19.67■□□□□ 0.74
SHCBP1-204ENST00000565887 CCNB3Q8WWL7 1395 aa19.67■□□□□ 0.74
SHCBP1-204ENST00000565887 LRRC9Q6ZRR7 1453 aa19.66■□□□□ 0.74
SHCBP1-204ENST00000565887 COL17A1Q9UMD9 1497 aaPredicted RBP19.63■□□□□ 0.73
SHCBP1-204ENST00000565887 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms