RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
CNOT1-208ENST00000565697 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
CNOT1-208ENST00000565697 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
CNOT1-208ENST00000565697 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
CNOT1-208ENST00000565697 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
CNOT1-208ENST00000565697 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
CNOT1-208ENST00000565697 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
CNOT1-208ENST00000565697 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
CNOT1-208ENST00000565697 ADAMTS12P58397 1594 aa17■□□□□ 0.31
CNOT1-208ENST00000565697 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
CNOT1-208ENST00000565697 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
CNOT1-208ENST00000565697 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
CNOT1-208ENST00000565697 NUP160Q12769 1436 aa16.91■□□□□ 0.3
CNOT1-208ENST00000565697 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
CNOT1-208ENST00000565697 IGF1RP08069 1367 aa16.89■□□□□ 0.29
CNOT1-208ENST00000565697 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
CNOT1-208ENST00000565697 CUL7Q14999 1698 aa16.87■□□□□ 0.29
CNOT1-208ENST00000565697 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
CNOT1-208ENST00000565697 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
CNOT1-208ENST00000565697 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
CNOT1-208ENST00000565697 JPH4Q96JJ6 628 aa16.77■□□□□ 0.28
CNOT1-208ENST00000565697 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
CNOT1-208ENST00000565697 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
CNOT1-208ENST00000565697 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
CNOT1-208ENST00000565697 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
CNOT1-208ENST00000565697 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
CNOT1-208ENST00000565697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.265e-30■■□□□ 11.7
CNOT1-208ENST00000565697 POTEHQ6S545 545 aa16.69■□□□□ 0.26
CNOT1-208ENST00000565697 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-208ENST00000565697 IQGAP2Q13576 1575 aa16.62■□□□□ 0.25
CNOT1-208ENST00000565697 EEA1Q15075 1411 aa16.6■□□□□ 0.25
CNOT1-208ENST00000565697 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
CNOT1-208ENST00000565697 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
CNOT1-208ENST00000565697 PRXQ9BXM0 1461 aa16.58■□□□□ 0.24
CNOT1-208ENST00000565697 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
CNOT1-208ENST00000565697 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
CNOT1-208ENST00000565697 PTPRGP23470 1445 aa16.53■□□□□ 0.24
CNOT1-208ENST00000565697 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.24
CNOT1-208ENST00000565697 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.23
CNOT1-208ENST00000565697 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
CNOT1-208ENST00000565697 DISP1Q96F81 1524 aa16.48■□□□□ 0.23
CNOT1-208ENST00000565697 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
CNOT1-208ENST00000565697 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-208ENST00000565697 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
CNOT1-208ENST00000565697 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
CNOT1-208ENST00000565697 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
CNOT1-208ENST00000565697 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
CNOT1-208ENST00000565697 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
CNOT1-208ENST00000565697 UHRF1BP1LA0JNW5 1464 aa16.41■□□□□ 0.22
CNOT1-208ENST00000565697 ABCC2Q92887 1545 aa16.39■□□□□ 0.21
CNOT1-208ENST00000565697 KIF21BO75037 1637 aa16.38■□□□□ 0.21
CNOT1-208ENST00000565697 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
CNOT1-208ENST00000565697 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
CNOT1-208ENST00000565697 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.2
CNOT1-208ENST00000565697 KDM5BQ9UGL1 1544 aa16.31■□□□□ 0.2
CNOT1-208ENST00000565697 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
CNOT1-208ENST00000565697 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
CNOT1-208ENST00000565697 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
CNOT1-208ENST00000565697 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
CNOT1-208ENST00000565697 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
CNOT1-208ENST00000565697 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
CNOT1-208ENST00000565697 DSG3P32926 999 aa16.28■□□□□ 0.2
CNOT1-208ENST00000565697 ABCA8O94911 1581 aa16.27■□□□□ 0.2
CNOT1-208ENST00000565697 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
CNOT1-208ENST00000565697 ZCCHC11Q5TAX3 1644 aaKnown RBP16.26■□□□□ 0.19
CNOT1-208ENST00000565697 CAPN15O75808 1086 aa16.25■□□□□ 0.19
CNOT1-208ENST00000565697 EFCAB5A4FU69 1503 aa16.24■□□□□ 0.19
CNOT1-208ENST00000565697 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
CNOT1-208ENST00000565697 GLI2P10070 1586 aa16.21■□□□□ 0.19
CNOT1-208ENST00000565697 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
CNOT1-208ENST00000565697 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
CNOT1-208ENST00000565697 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
CNOT1-208ENST00000565697 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
CNOT1-208ENST00000565697 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-208ENST00000565697 RAPGEF6Q8TEU7 1601 aa16.18■□□□□ 0.18
CNOT1-208ENST00000565697 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
CNOT1-208ENST00000565697 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
CNOT1-208ENST00000565697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
CNOT1-208ENST00000565697 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
CNOT1-208ENST00000565697 ATP10BO94823 1461 aa16.14■□□□□ 0.17
CNOT1-208ENST00000565697 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
CNOT1-208ENST00000565697 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
CNOT1-208ENST00000565697 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
CNOT1-208ENST00000565697 TEX14Q8IWB6 1497 aa16.11■□□□□ 0.17
CNOT1-208ENST00000565697 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
CNOT1-208ENST00000565697 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
CNOT1-208ENST00000565697 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
CNOT1-208ENST00000565697 KDM6BO15054 1643 aa16.09■□□□□ 0.17
CNOT1-208ENST00000565697 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
CNOT1-208ENST00000565697 CD109Q6YHK3 1445 aa16.07■□□□□ 0.16
CNOT1-208ENST00000565697 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
CNOT1-208ENST00000565697 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
CNOT1-208ENST00000565697 MAGI3Q5TCQ9 1506 aa16.04■□□□□ 0.16
CNOT1-208ENST00000565697 HECW1Q76N89 1606 aa16.02■□□□□ 0.16
CNOT1-208ENST00000565697 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
CNOT1-208ENST00000565697 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
CNOT1-208ENST00000565697 ABCA9Q8IUA7 1624 aa16■□□□□ 0.15
CNOT1-208ENST00000565697 CLIP1P30622 1438 aa15.99■□□□□ 0.15
CNOT1-208ENST00000565697 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
CNOT1-208ENST00000565697 CDK13Q14004 1512 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms