RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-215ENST00000565507 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
SCAPER-215ENST00000565507 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
SCAPER-215ENST00000565507 GTF3C3Q9Y5Q9 886 aa19.48■□□□□ 0.71
SCAPER-215ENST00000565507 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
SCAPER-215ENST00000565507 MIER1Q8N108 512 aa19.45■□□□□ 0.7
SCAPER-215ENST00000565507 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
SCAPER-215ENST00000565507 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.7
SCAPER-215ENST00000565507 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
SCAPER-215ENST00000565507 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
SCAPER-215ENST00000565507 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
SCAPER-215ENST00000565507 CCNB3Q8WWL7 1395 aa19.39■□□□□ 0.69
SCAPER-215ENST00000565507 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
SCAPER-215ENST00000565507 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
SCAPER-215ENST00000565507 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
SCAPER-215ENST00000565507 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
SCAPER-215ENST00000565507 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
SCAPER-215ENST00000565507 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
SCAPER-215ENST00000565507 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
SCAPER-215ENST00000565507 CUL7Q14999 1698 aa19.28■□□□□ 0.68
SCAPER-215ENST00000565507 WDR62O43379 1518 aa19.28■□□□□ 0.68
SCAPER-215ENST00000565507 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
SCAPER-215ENST00000565507 LRRC9Q6ZRR7 1453 aa19.25■□□□□ 0.67
SCAPER-215ENST00000565507 ITGAEP38570 1179 aa19.21■□□□□ 0.67
SCAPER-215ENST00000565507 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
SCAPER-215ENST00000565507 THOC2Q8NI27 1593 aaKnown RBP19.21■□□□□ 0.67
SCAPER-215ENST00000565507 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
SCAPER-215ENST00000565507 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
SCAPER-215ENST00000565507 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
SCAPER-215ENST00000565507 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
SCAPER-215ENST00000565507 MAPKBP1O60336 1514 aa19.18■□□□□ 0.66
SCAPER-215ENST00000565507 CTTNBP2Q8WZ74 1663 aa19.17■□□□□ 0.66
SCAPER-215ENST00000565507 PCF11O94913 1555 aaKnown RBP19.16■□□□□ 0.66
SCAPER-215ENST00000565507 CFAP43Q8NDM7 1665 aa19.16■□□□□ 0.66
SCAPER-215ENST00000565507 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
SCAPER-215ENST00000565507 SETD5Q9C0A6 1442 aa19.14■□□□□ 0.65
SCAPER-215ENST00000565507 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
SCAPER-215ENST00000565507 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
SCAPER-215ENST00000565507 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
SCAPER-215ENST00000565507 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
SCAPER-215ENST00000565507 FBLN2P98095 1184 aa19.09■□□□□ 0.65
SCAPER-215ENST00000565507 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
SCAPER-215ENST00000565507 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
SCAPER-215ENST00000565507 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
SCAPER-215ENST00000565507 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
SCAPER-215ENST00000565507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.02■□□□□ 0.64
SCAPER-215ENST00000565507 SAMD9Q5K651 1589 aa19.02■□□□□ 0.64
SCAPER-215ENST00000565507 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
SCAPER-215ENST00000565507 IQGAP2Q13576 1575 aa18.98■□□□□ 0.63
SCAPER-215ENST00000565507 FMN1Q68DA7 1419 aa18.98■□□□□ 0.63
SCAPER-215ENST00000565507 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
SCAPER-215ENST00000565507 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
SCAPER-215ENST00000565507 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
SCAPER-215ENST00000565507 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
SCAPER-215ENST00000565507 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
SCAPER-215ENST00000565507 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
SCAPER-215ENST00000565507 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
SCAPER-215ENST00000565507 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
SCAPER-215ENST00000565507 DISP1Q96F81 1524 aa18.88■□□□□ 0.61
SCAPER-215ENST00000565507 KIAA0586Q9BVV6 1533 aa18.88■□□□□ 0.61
SCAPER-215ENST00000565507 MTUS2Q5JR59 1369 aa18.86■□□□□ 0.61
SCAPER-215ENST00000565507 PTPRKQ15262 1439 aa18.86■□□□□ 0.61
SCAPER-215ENST00000565507 MAGI3Q5TCQ9 1506 aa18.85■□□□□ 0.61
SCAPER-215ENST00000565507 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
SCAPER-215ENST00000565507 UGGT2Q9NYU1 1516 aa18.84■□□□□ 0.61
SCAPER-215ENST00000565507 CDK13Q14004 1512 aaKnown RBP18.84■□□□□ 0.61
SCAPER-215ENST00000565507 KCNH8Q96L42 1107 aa18.84■□□□□ 0.61
SCAPER-215ENST00000565507 HFM1A2PYH4 1435 aa18.84■□□□□ 0.61
SCAPER-215ENST00000565507 NCOA2Q15596 1464 aa18.82■□□□□ 0.6
SCAPER-215ENST00000565507 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
SCAPER-215ENST00000565507 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
SCAPER-215ENST00000565507 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
SCAPER-215ENST00000565507 KIAA0556O60303 1618 aa18.8■□□□□ 0.6
SCAPER-215ENST00000565507 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
SCAPER-215ENST00000565507 JPH4Q96JJ6 628 aa18.8■□□□□ 0.6
SCAPER-215ENST00000565507 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
SCAPER-215ENST00000565507 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
SCAPER-215ENST00000565507 NUP160Q12769 1436 aa18.77■□□□□ 0.6
SCAPER-215ENST00000565507 NAIPQ13075 1403 aa18.77■□□□□ 0.6
SCAPER-215ENST00000565507 EPRSP07814 1512 aaKnown RBP18.77■□□□□ 0.59
SCAPER-215ENST00000565507 EHBP1L1Q8N3D4 1523 aa18.77■□□□□ 0.59
SCAPER-215ENST00000565507 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
SCAPER-215ENST00000565507 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
SCAPER-215ENST00000565507 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
SCAPER-215ENST00000565507 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
SCAPER-215ENST00000565507 NUP153P49790 1475 aaKnown RBP18.71■□□□□ 0.59
SCAPER-215ENST00000565507 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
SCAPER-215ENST00000565507 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
SCAPER-215ENST00000565507 TCOF1Q13428 1488 aaKnown RBP18.68■□□□□ 0.58
SCAPER-215ENST00000565507 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
SCAPER-215ENST00000565507 CHD1O14646 1710 aa18.66■□□□□ 0.58
SCAPER-215ENST00000565507 CCER2I3L3R5 266 aa18.63■□□□□ 0.57
SCAPER-215ENST00000565507 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
SCAPER-215ENST00000565507 PRG4Q92954 1404 aaPredicted RBP18.63■□□□□ 0.57
SCAPER-215ENST00000565507 CHIC2Q9UKJ5 165 aa18.62■□□□□ 0.57
SCAPER-215ENST00000565507 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
SCAPER-215ENST00000565507 CARMIL2Q6F5E8 1435 aa18.6■□□□□ 0.57
SCAPER-215ENST00000565507 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
SCAPER-215ENST00000565507 AKNAQ7Z591 1439 aa18.6■□□□□ 0.57
SCAPER-215ENST00000565507 GCC2Q8IWJ2 1684 aa18.59■□□□□ 0.57
SCAPER-215ENST00000565507 RRP7BPQ9NSQ0 103 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms