RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 FANCD2Q9BXW9 1451 aa10.59□□□□□ -0.71
SMG1-210ENST00000565224 CARMIL1Q5VZK9 1371 aa10.59□□□□□ -0.71
SMG1-210ENST00000565224 TIAM1Q13009 1591 aa10.58□□□□□ -0.72
SMG1-210ENST00000565224 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
SMG1-210ENST00000565224 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
SMG1-210ENST00000565224 ITGAEP38570 1179 aa10.54□□□□□ -0.72
SMG1-210ENST00000565224 RAB3GAP2Q9H2M9 1393 aa10.54□□□□□ -0.72
SMG1-210ENST00000565224 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
SMG1-210ENST00000565224 FHAD1B1AJZ9 1412 aa10.53□□□□□ -0.72
SMG1-210ENST00000565224 URB2Q14146 1524 aaKnown RBP10.52□□□□□ -0.73
SMG1-210ENST00000565224 MAPKBP1O60336 1514 aa10.52□□□□□ -0.73
SMG1-210ENST00000565224 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
SMG1-210ENST00000565224 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
SMG1-210ENST00000565224 PHLDB1Q86UU1 1377 aa10.5□□□□□ -0.73
SMG1-210ENST00000565224 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
SMG1-210ENST00000565224 WDR62O43379 1518 aa10.49□□□□□ -0.73
SMG1-210ENST00000565224 PCF11O94913 1555 aaKnown RBP10.49□□□□□ -0.73
SMG1-210ENST00000565224 DNMBPQ6XZF7 1577 aa10.47□□□□□ -0.73
SMG1-210ENST00000565224 ABCA10Q8WWZ4 1543 aa10.47□□□□□ -0.73
SMG1-210ENST00000565224 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.73
SMG1-210ENST00000565224 FYCO1Q9BQS8 1478 aa10.46□□□□□ -0.74
SMG1-210ENST00000565224 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.74
SMG1-210ENST00000565224 FHOD3Q2V2M9 1422 aa10.45□□□□□ -0.74
SMG1-210ENST00000565224 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
SMG1-210ENST00000565224 AQRO60306 1485 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMG1-210ENST00000565224 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
SMG1-210ENST00000565224 CASKIN1Q8WXD9 1431 aa10.44□□□□□ -0.74
SMG1-210ENST00000565224 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
SMG1-210ENST00000565224 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
SMG1-210ENST00000565224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMG1-210ENST00000565224 CUL7Q14999 1698 aa10.43□□□□□ -0.74
SMG1-210ENST00000565224 ATP1B4Q9UN42 357 aaPredicted RBP10.42□□□□□ -0.74
SMG1-210ENST00000565224 TIMELESSQ9UNS1 1208 aa10.41□□□□□ -0.74
SMG1-210ENST00000565224 SIN3AQ96ST3 1273 aa10.4□□□□□ -0.74
SMG1-210ENST00000565224 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
SMG1-210ENST00000565224 FMN1Q68DA7 1419 aa10.39□□□□□ -0.75
SMG1-210ENST00000565224 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
SMG1-210ENST00000565224 CTTNBP2Q8WZ74 1663 aa10.39□□□□□ -0.75
SMG1-210ENST00000565224 ZNF608Q9ULD9 1512 aaPredicted RBP10.37□□□□□ -0.75
SMG1-210ENST00000565224 FGD6Q6ZV73 1430 aa10.37□□□□□ -0.75
SMG1-210ENST00000565224 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
SMG1-210ENST00000565224 PPP1R15AO75807 674 aaPredicted RBP10.34□□□□□ -0.75
SMG1-210ENST00000565224 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
SMG1-210ENST00000565224 SAMD9Q5K651 1589 aa10.33□□□□□ -0.76
SMG1-210ENST00000565224 DDX10Q13206 875 aaKnown RBP10.33□□□□□ -0.76
SMG1-210ENST00000565224 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
SMG1-210ENST00000565224 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
SMG1-210ENST00000565224 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
SMG1-210ENST00000565224 CCDC18Q5T9S5 1454 aa10.33□□□□□ -0.76
SMG1-210ENST00000565224 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
SMG1-210ENST00000565224 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
SMG1-210ENST00000565224 UACAQ9BZF9 1416 aa10.31□□□□□ -0.76
SMG1-210ENST00000565224 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
SMG1-210ENST00000565224 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
SMG1-210ENST00000565224 PTPRKQ15262 1439 aa10.3□□□□□ -0.76
SMG1-210ENST00000565224 MYOM3Q5VTT5 1437 aa10.3□□□□□ -0.76
SMG1-210ENST00000565224 NCOA2Q15596 1464 aa10.3□□□□□ -0.76
SMG1-210ENST00000565224 IFT140Q96RY7 1462 aa10.3□□□□□ -0.76
SMG1-210ENST00000565224 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
SMG1-210ENST00000565224 PTPN23Q9H3S7 1636 aa10.3□□□□□ -0.76
SMG1-210ENST00000565224 EHBP1L1Q8N3D4 1523 aa10.29□□□□□ -0.76
SMG1-210ENST00000565224 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
SMG1-210ENST00000565224 NAIPQ13075 1403 aa10.28□□□□□ -0.76
SMG1-210ENST00000565224 SUPT6HQ7KZ85 1726 aaKnown RBP10.27□□□□□ -0.77
SMG1-210ENST00000565224 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.77
SMG1-210ENST00000565224 ANP32CO43423 234 aa10.26□□□□□ -0.77
SMG1-210ENST00000565224 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
SMG1-210ENST00000565224 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
SMG1-210ENST00000565224 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
SMG1-210ENST00000565224 ARHGEF11O15085 1522 aa10.25□□□□□ -0.77
SMG1-210ENST00000565224 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
SMG1-210ENST00000565224 TCOF1Q13428 1488 aaKnown RBP10.23□□□□□ -0.77
SMG1-210ENST00000565224 MAGI3Q5TCQ9 1506 aa10.22□□□□□ -0.77
SMG1-210ENST00000565224 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.77
SMG1-210ENST00000565224 HECW1Q76N89 1606 aa10.21□□□□□ -0.77
SMG1-210ENST00000565224 FKBP8Q14318 412 aa10.21□□□□□ -0.78
SMG1-210ENST00000565224 AKNAQ7Z591 1439 aa10.2□□□□□ -0.78
SMG1-210ENST00000565224 GCC2Q8IWJ2 1684 aa10.19□□□□□ -0.78
SMG1-210ENST00000565224 NEFLP07196 543 aa10.18□□□□□ -0.78
SMG1-210ENST00000565224 RRP7BPQ9NSQ0 103 aa10.18□□□□□ -0.78
SMG1-210ENST00000565224 IQGAP2Q13576 1575 aa10.18□□□□□ -0.78
SMG1-210ENST00000565224 EPRSP07814 1512 aaKnown RBP10.18□□□□□ -0.78
SMG1-210ENST00000565224 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
SMG1-210ENST00000565224 BCANQ96GW7 911 aa10.18□□□□□ -0.78
SMG1-210ENST00000565224 MIA2Q96PC5 1412 aa10.18□□□□□ -0.78
SMG1-210ENST00000565224 PBRM1Q86U86 1689 aa10.16□□□□□ -0.78
SMG1-210ENST00000565224 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
SMG1-210ENST00000565224 CHIC2Q9UKJ5 165 aa10.16□□□□□ -0.78
SMG1-210ENST00000565224 ADAMTS12P58397 1594 aa10.16□□□□□ -0.78
SMG1-210ENST00000565224 DENND4BO75064 1496 aaPredicted RBP10.16□□□□□ -0.78
SMG1-210ENST00000565224 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
SMG1-210ENST00000565224 HSPA5P11021 654 aaKnown RBP10.14□□□□□ -0.79
SMG1-210ENST00000565224 KDM6BO15054 1643 aa10.13□□□□□ -0.79
SMG1-210ENST00000565224 FBLN2P98095 1184 aa10.13□□□□□ -0.79
SMG1-210ENST00000565224 WASHC2AQ641Q2 1341 aa10.13□□□□□ -0.79
SMG1-210ENST00000565224 MPHOSPH9Q99550 1183 aa10.12□□□□□ -0.79
SMG1-210ENST00000565224 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMG1-210ENST00000565224 ROCK1Q13464 1354 aa10.11□□□□□ -0.79
SMG1-210ENST00000565224 CHD1O14646 1710 aa10.11□□□□□ -0.79
SMG1-210ENST00000565224 OSCARQ8IYS5 282 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms