RNA–Protein interactions for RNA: ENST00000564999.5

TCF4-225, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TCF4, Length 3,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-225ENST00000564999 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
TCF4-225ENST00000564999 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
TCF4-225ENST00000564999 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
TCF4-225ENST00000564999 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
TCF4-225ENST00000564999 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
TCF4-225ENST00000564999 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
TCF4-225ENST00000564999 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
TCF4-225ENST00000564999 ZNF428Q96B54 188 aa11.05□□□□□ -0.64
TCF4-225ENST00000564999 VASPP50552 380 aaPredicted RBP11.05□□□□□ -0.64
TCF4-225ENST00000564999 DHX37Q8IY37 1157 aaKnown RBP11.04□□□□□ -0.64
TCF4-225ENST00000564999 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
TCF4-225ENST00000564999 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
TCF4-225ENST00000564999 BAZ1BQ9UIG0 1483 aaKnown RBP10.99□□□□□ -0.65
TCF4-225ENST00000564999 RGL2O15211 777 aa10.98□□□□□ -0.65
TCF4-225ENST00000564999 CFTRP13569 1480 aa10.98□□□□□ -0.65
TCF4-225ENST00000564999 CCDC9Q9Y3X0 531 aaKnown RBP10.97□□□□□ -0.65
TCF4-225ENST00000564999 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
TCF4-225ENST00000564999 CC2D2AQ9P2K1 1620 aa10.96□□□□□ -0.66
TCF4-225ENST00000564999 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
TCF4-225ENST00000564999 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
TCF4-225ENST00000564999 CDK11BP21127 795 aaKnown RBP10.93□□□□□ -0.66
TCF4-225ENST00000564999 CDK11AQ9UQ88 783 aaPredicted RBP10.93□□□□□ -0.66
TCF4-225ENST00000564999 CUX1P39880 1505 aa10.93□□□□□ -0.66
TCF4-225ENST00000564999 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
TCF4-225ENST00000564999 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
TCF4-225ENST00000564999 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
TCF4-225ENST00000564999 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
TCF4-225ENST00000564999 ERICH3Q5RHP9 1530 aa10.91□□□□□ -0.66
TCF4-225ENST00000564999 EEA1Q15075 1411 aa10.91□□□□□ -0.66
TCF4-225ENST00000564999 PIAS4Q8N2W9 510 aaPredicted RBP10.9□□□□□ -0.66
TCF4-225ENST00000564999 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
TCF4-225ENST00000564999 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
TCF4-225ENST00000564999 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
TCF4-225ENST00000564999 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
TCF4-225ENST00000564999 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
TCF4-225ENST00000564999 FOXD4L5Q5VV16 416 aaPredicted RBP10.81□□□□□ -0.68
TCF4-225ENST00000564999 FOXD4L4Q8WXT5 416 aaPredicted RBP10.81□□□□□ -0.68
TCF4-225ENST00000564999 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
TCF4-225ENST00000564999 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
TCF4-225ENST00000564999 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
TCF4-225ENST00000564999 FAM9AQ8IZU1 332 aaPredicted RBP10.8□□□□□ -0.68
TCF4-225ENST00000564999 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
TCF4-225ENST00000564999 SOGA1O94964 1423 aa10.78□□□□□ -0.68
TCF4-225ENST00000564999 RAD21O60216 631 aa10.77□□□□□ -0.69
TCF4-225ENST00000564999 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
TCF4-225ENST00000564999 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.69
TCF4-225ENST00000564999 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
TCF4-225ENST00000564999 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
TCF4-225ENST00000564999 APBB1O00213 710 aa10.76□□□□□ -0.69
TCF4-225ENST00000564999 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
TCF4-225ENST00000564999 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
TCF4-225ENST00000564999 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
TCF4-225ENST00000564999 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
TCF4-225ENST00000564999 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
TCF4-225ENST00000564999 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
TCF4-225ENST00000564999 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
TCF4-225ENST00000564999 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
TCF4-225ENST00000564999 POLR3GLQ9BT43 218 aa10.72□□□□□ -0.69
TCF4-225ENST00000564999 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
TCF4-225ENST00000564999 TNIKQ9UKE5 1360 aa10.72□□□□□ -0.69
TCF4-225ENST00000564999 SLC24A3Q9HC58 644 aa10.71□□□□□ -0.69
TCF4-225ENST00000564999 CUL7Q14999 1698 aa10.71□□□□□ -0.69
TCF4-225ENST00000564999 CFAP43Q8NDM7 1665 aa10.7□□□□□ -0.7
TCF4-225ENST00000564999 MYCNP04198 464 aaPredicted RBP10.7□□□□□ -0.7
TCF4-225ENST00000564999 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
TCF4-225ENST00000564999 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
TCF4-225ENST00000564999 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
TCF4-225ENST00000564999 PBRM1Q86U86 1689 aa10.67□□□□□ -0.7
TCF4-225ENST00000564999 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
TCF4-225ENST00000564999 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
TCF4-225ENST00000564999 HSP90B1P14625 803 aaKnown RBP10.66□□□□□ -0.7
TCF4-225ENST00000564999 SAMD9Q5K651 1589 aa10.65□□□□□ -0.7
TCF4-225ENST00000564999 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
TCF4-225ENST00000564999 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
TCF4-225ENST00000564999 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
TCF4-225ENST00000564999 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
TCF4-225ENST00000564999 ARAP1Q96P48 1450 aa10.62□□□□□ -0.71
TCF4-225ENST00000564999 THOC2Q8NI27 1593 aaKnown RBP10.62□□□□□ -0.71
TCF4-225ENST00000564999 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
TCF4-225ENST00000564999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.61□□□□□ -0.71
TCF4-225ENST00000564999 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
TCF4-225ENST00000564999 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
TCF4-225ENST00000564999 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
TCF4-225ENST00000564999 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
TCF4-225ENST00000564999 WDR62O43379 1518 aa10.59□□□□□ -0.71
TCF4-225ENST00000564999 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
TCF4-225ENST00000564999 CCDC82Q8N4S0 544 aa10.58□□□□□ -0.72
TCF4-225ENST00000564999 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
TCF4-225ENST00000564999 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
TCF4-225ENST00000564999 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
TCF4-225ENST00000564999 RGS22Q8NE09 1264 aa10.56□□□□□ -0.72
TCF4-225ENST00000564999 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
TCF4-225ENST00000564999 FANCD2Q9BXW9 1451 aa10.55□□□□□ -0.72
TCF4-225ENST00000564999 IRX6P78412 446 aaPredicted RBP10.55□□□□□ -0.72
TCF4-225ENST00000564999 CUX2O14529 1486 aa10.54□□□□□ -0.72
TCF4-225ENST00000564999 MKRN3Q13064 507 aaKnown RBP10.54□□□□□ -0.72
TCF4-225ENST00000564999 PDE4CQ08493 712 aa10.53□□□□□ -0.72
TCF4-225ENST00000564999 BRD2P25440 801 aaKnown RBP10.52□□□□□ -0.72
TCF4-225ENST00000564999 ADAMTS12P58397 1594 aa10.51□□□□□ -0.73
TCF4-225ENST00000564999 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms