RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
HERC2-207ENST00000564734 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
HERC2-207ENST00000564734 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
HERC2-207ENST00000564734 LRRC9Q6ZRR7 1453 aa22.49■■□□□ 1.19
HERC2-207ENST00000564734 FHAD1B1AJZ9 1412 aa22.47■■□□□ 1.19
HERC2-207ENST00000564734 MIER1Q8N108 512 aa22.46■■□□□ 1.19
HERC2-207ENST00000564734 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
HERC2-207ENST00000564734 CFAP43Q8NDM7 1665 aa22.44■■□□□ 1.18
HERC2-207ENST00000564734 CUL7Q14999 1698 aa22.43■■□□□ 1.18
HERC2-207ENST00000564734 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
HERC2-207ENST00000564734 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
HERC2-207ENST00000564734 EFCAB5A4FU69 1503 aa22.4■■□□□ 1.18
HERC2-207ENST00000564734 PHLDB1Q86UU1 1377 aa22.4■■□□□ 1.18
HERC2-207ENST00000564734 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
HERC2-207ENST00000564734 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
HERC2-207ENST00000564734 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.172e-6■■■■□ 21.9
HERC2-207ENST00000564734 RAB3GAP2Q9H2M9 1393 aa22.36■■□□□ 1.17
HERC2-207ENST00000564734 FHOD3Q2V2M9 1422 aa22.35■■□□□ 1.17
HERC2-207ENST00000564734 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
HERC2-207ENST00000564734 CTTNBP2Q8WZ74 1663 aa22.34■■□□□ 1.17
HERC2-207ENST00000564734 CASKIN1Q8WXD9 1431 aa22.33■■□□□ 1.17
HERC2-207ENST00000564734 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
HERC2-207ENST00000564734 ITGAEP38570 1179 aa22.33■■□□□ 1.16
HERC2-207ENST00000564734 MAPKBP1O60336 1514 aa22.32■■□□□ 1.16
HERC2-207ENST00000564734 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
HERC2-207ENST00000564734 ABCA5Q8WWZ7 1642 aa22.3■■□□□ 1.16
HERC2-207ENST00000564734 PELP1Q8IZL8 1130 aaKnown RBP22.29■■□□□ 1.16
HERC2-207ENST00000564734 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
HERC2-207ENST00000564734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.24■■□□□ 1.15
HERC2-207ENST00000564734 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
HERC2-207ENST00000564734 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
HERC2-207ENST00000564734 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
HERC2-207ENST00000564734 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
HERC2-207ENST00000564734 SAMD9Q5K651 1589 aa22.22■■□□□ 1.15
HERC2-207ENST00000564734 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
HERC2-207ENST00000564734 WDR62O43379 1518 aa22.2■■□□□ 1.14
HERC2-207ENST00000564734 FAM50AQ14320 339 aaKnown RBP22.19■■□□□ 1.14
HERC2-207ENST00000564734 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
HERC2-207ENST00000564734 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
HERC2-207ENST00000564734 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
HERC2-207ENST00000564734 FBLN2P98095 1184 aa22.11■■□□□ 1.13
HERC2-207ENST00000564734 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
HERC2-207ENST00000564734 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
HERC2-207ENST00000564734 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
HERC2-207ENST00000564734 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
HERC2-207ENST00000564734 TIMELESSQ9UNS1 1208 aa22.04■■□□□ 1.12
HERC2-207ENST00000564734 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
HERC2-207ENST00000564734 MTUS2Q5JR59 1369 aa22.03■■□□□ 1.12
HERC2-207ENST00000564734 PTPRKQ15262 1439 aa22.01■■□□□ 1.11
HERC2-207ENST00000564734 NCOA2Q15596 1464 aa22■■□□□ 1.11
HERC2-207ENST00000564734 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
HERC2-207ENST00000564734 MYOM3Q5VTT5 1437 aa21.98■■□□□ 1.11
HERC2-207ENST00000564734 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
HERC2-207ENST00000564734 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
HERC2-207ENST00000564734 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
HERC2-207ENST00000564734 SUPT6HQ7KZ85 1726 aaKnown RBP21.96■■□□□ 1.11
HERC2-207ENST00000564734 UGGT2Q9NYU1 1516 aa21.94■■□□□ 1.1
HERC2-207ENST00000564734 MAGI3Q5TCQ9 1506 aa21.94■■□□□ 1.1
HERC2-207ENST00000564734 PTPN23Q9H3S7 1636 aa21.94■■□□□ 1.1
HERC2-207ENST00000564734 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
HERC2-207ENST00000564734 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
HERC2-207ENST00000564734 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
HERC2-207ENST00000564734 NAIPQ13075 1403 aa21.9■■□□□ 1.1
HERC2-207ENST00000564734 UACAQ9BZF9 1416 aa21.9■■□□□ 1.1
HERC2-207ENST00000564734 IQGAP2Q13576 1575 aa21.9■■□□□ 1.1
HERC2-207ENST00000564734 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
HERC2-207ENST00000564734 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.09
HERC2-207ENST00000564734 HECW1Q76N89 1606 aa21.87■■□□□ 1.09
HERC2-207ENST00000564734 TCOF1Q13428 1488 aaKnown RBP21.87■■□□□ 1.09
HERC2-207ENST00000564734 EPRSP07814 1512 aaKnown RBP21.83■■□□□ 1.08
HERC2-207ENST00000564734 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
HERC2-207ENST00000564734 KCNH8Q96L42 1107 aa21.76■■□□□ 1.07
HERC2-207ENST00000564734 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
HERC2-207ENST00000564734 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
HERC2-207ENST00000564734 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
HERC2-207ENST00000564734 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
HERC2-207ENST00000564734 KDM5BQ9UGL1 1544 aa21.75■■□□□ 1.07
HERC2-207ENST00000564734 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
HERC2-207ENST00000564734 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
HERC2-207ENST00000564734 DENND4BO75064 1496 aaPredicted RBP21.71■■□□□ 1.07
HERC2-207ENST00000564734 DISP1Q96F81 1524 aa21.7■■□□□ 1.06
HERC2-207ENST00000564734 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
HERC2-207ENST00000564734 RRP7BPQ9NSQ0 103 aa21.67■■□□□ 1.06
HERC2-207ENST00000564734 KDM6BO15054 1643 aa21.67■■□□□ 1.06
HERC2-207ENST00000564734 HIRIP3Q9BW71 556 aaPredicted RBP21.67■■□□□ 1.06
HERC2-207ENST00000564734 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
HERC2-207ENST00000564734 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.05
HERC2-207ENST00000564734 CHIC2Q9UKJ5 165 aa21.64■■□□□ 1.05
HERC2-207ENST00000564734 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
HERC2-207ENST00000564734 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
HERC2-207ENST00000564734 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
HERC2-207ENST00000564734 CCER2I3L3R5 266 aa21.61■■□□□ 1.05
HERC2-207ENST00000564734 RAPGEF6Q8TEU7 1601 aa21.59■■□□□ 1.05
HERC2-207ENST00000564734 ROCK1Q13464 1354 aa21.58■■□□□ 1.05
HERC2-207ENST00000564734 DAPK1P53355 1430 aa21.57■■□□□ 1.04
HERC2-207ENST00000564734 ARID3CA6NKF2 412 aa21.57■■□□□ 1.04
HERC2-207ENST00000564734 DNMT1P26358 1616 aaKnown RBP21.55■■□□□ 1.04
HERC2-207ENST00000564734 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
HERC2-207ENST00000564734 ABCC5O15440 1437 aa21.55■■□□□ 1.04
HERC2-207ENST00000564734 ANP32CO43423 234 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms