RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
MSLN-205ENST00000563941 CENPBP07199 599 aaPredicted RBP29.5■■■□□ 2.31
MSLN-205ENST00000563941 LRRC9Q6ZRR7 1453 aa29.5■■■□□ 2.31
MSLN-205ENST00000563941 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
MSLN-205ENST00000563941 CFAP43Q8NDM7 1665 aa29.49■■■□□ 2.31
MSLN-205ENST00000563941 WDR97A6NE52 1622 aa29.47■■■□□ 2.31
MSLN-205ENST00000563941 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
MSLN-205ENST00000563941 CTTNBP2Q8WZ74 1663 aa29.45■■■□□ 2.31
MSLN-205ENST00000563941 EFCAB5A4FU69 1503 aa29.44■■■□□ 2.3
MSLN-205ENST00000563941 P3H3Q8IVL6 736 aa29.41■■■□□ 2.3
MSLN-205ENST00000563941 ITGAEP38570 1179 aa29.41■■■□□ 2.3
MSLN-205ENST00000563941 PDS5BQ9NTI5 1447 aa29.4■■■□□ 2.3
MSLN-205ENST00000563941 FHOD3Q2V2M9 1422 aa29.39■■■□□ 2.3
MSLN-205ENST00000563941 PHLDB1Q86UU1 1377 aa29.36■■■□□ 2.29
MSLN-205ENST00000563941 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
MSLN-205ENST00000563941 MIER1Q8N108 512 aa29.34■■■□□ 2.29
MSLN-205ENST00000563941 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
MSLN-205ENST00000563941 AQRO60306 1485 aaKnown RBP eCLIP29.31■■■□□ 2.28
MSLN-205ENST00000563941 RAB3GAP2Q9H2M9 1393 aa29.31■■■□□ 2.28
MSLN-205ENST00000563941 CASKIN1Q8WXD9 1431 aa29.31■■■□□ 2.28
MSLN-205ENST00000563941 ATP1B4Q9UN42 357 aaPredicted RBP29.28■■■□□ 2.28
MSLN-205ENST00000563941 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
MSLN-205ENST00000563941 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
MSLN-205ENST00000563941 GAPVD1Q14C86 1478 aa29.24■■■□□ 2.27
MSLN-205ENST00000563941 SETD5Q9C0A6 1442 aa29.23■■■□□ 2.27
MSLN-205ENST00000563941 FMN1Q68DA7 1419 aa29.21■■■□□ 2.27
MSLN-205ENST00000563941 GTF3C3Q9Y5Q9 886 aa29.21■■■□□ 2.27
MSLN-205ENST00000563941 FAM50AQ14320 339 aaKnown RBP29.2■■■□□ 2.27
MSLN-205ENST00000563941 MAPKBP1O60336 1514 aa29.2■■■□□ 2.27
MSLN-205ENST00000563941 YTHDC1Q96MU7 727 aaKnown RBP29.18■■■□□ 2.26
MSLN-205ENST00000563941 SAMD9Q5K651 1589 aa29.18■■■□□ 2.26
MSLN-205ENST00000563941 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
MSLN-205ENST00000563941 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
MSLN-205ENST00000563941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.25
MSLN-205ENST00000563941 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
MSLN-205ENST00000563941 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
MSLN-205ENST00000563941 GRIN2BQ13224 1484 aa29.01■■■□□ 2.24
MSLN-205ENST00000563941 MTUS2Q5JR59 1369 aa29.01■■■□□ 2.23
MSLN-205ENST00000563941 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
MSLN-205ENST00000563941 PBRM1Q86U86 1689 aa29■■■□□ 2.23
MSLN-205ENST00000563941 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
MSLN-205ENST00000563941 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
MSLN-205ENST00000563941 SUPT6HQ7KZ85 1726 aaKnown RBP28.9■■■□□ 2.22
MSLN-205ENST00000563941 EHBP1L1Q8N3D4 1523 aa28.9■■■□□ 2.22
MSLN-205ENST00000563941 NCOA2Q15596 1464 aa28.9■■■□□ 2.22
MSLN-205ENST00000563941 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
MSLN-205ENST00000563941 SIN3AQ96ST3 1273 aa28.88■■■□□ 2.21
MSLN-205ENST00000563941 MYOM3Q5VTT5 1437 aa28.86■■■□□ 2.21
MSLN-205ENST00000563941 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
MSLN-205ENST00000563941 CCDC18Q5T9S5 1454 aa28.82■■■□□ 2.2
MSLN-205ENST00000563941 PTPRKQ15262 1439 aa28.82■■■□□ 2.2
MSLN-205ENST00000563941 HFM1A2PYH4 1435 aa28.81■■■□□ 2.2
MSLN-205ENST00000563941 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
MSLN-205ENST00000563941 UGGT2Q9NYU1 1516 aa28.8■■■□□ 2.2
MSLN-205ENST00000563941 HECW1Q76N89 1606 aa28.8■■■□□ 2.2
MSLN-205ENST00000563941 PTPN23Q9H3S7 1636 aa28.79■■■□□ 2.2
MSLN-205ENST00000563941 WDR62O43379 1518 aa28.79■■■□□ 2.2
MSLN-205ENST00000563941 MAGI3Q5TCQ9 1506 aa28.79■■■□□ 2.2
MSLN-205ENST00000563941 ARHGEF11O15085 1522 aa28.78■■■□□ 2.2
MSLN-205ENST00000563941 UACAQ9BZF9 1416 aa28.72■■■□□ 2.19
MSLN-205ENST00000563941 IFT140Q96RY7 1462 aa28.7■■■□□ 2.19
MSLN-205ENST00000563941 NAIPQ13075 1403 aa28.7■■■□□ 2.18
MSLN-205ENST00000563941 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
MSLN-205ENST00000563941 EPRSP07814 1512 aaKnown RBP28.69■■■□□ 2.18
MSLN-205ENST00000563941 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
MSLN-205ENST00000563941 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
MSLN-205ENST00000563941 PPP1R15AO75807 674 aaPredicted RBP28.65■■■□□ 2.18
MSLN-205ENST00000563941 CDK13Q14004 1512 aaKnown RBP28.63■■■□□ 2.17
MSLN-205ENST00000563941 TONSLQ96HA7 1378 aa28.58■■■□□ 2.17
MSLN-205ENST00000563941 GCC2Q8IWJ2 1684 aa28.58■■■□□ 2.17
MSLN-205ENST00000563941 KIAA0586Q9BVV6 1533 aa28.55■■■□□ 2.16
MSLN-205ENST00000563941 KIAA0556O60303 1618 aa28.55■■■□□ 2.16
MSLN-205ENST00000563941 MIA2Q96PC5 1412 aa28.53■■■□□ 2.16
MSLN-205ENST00000563941 EIF4G3O43432 1585 aaKnown RBP28.53■■■□□ 2.16
MSLN-205ENST00000563941 DDX10Q13206 875 aaKnown RBP28.52■■■□□ 2.16
MSLN-205ENST00000563941 DISP1Q96F81 1524 aa28.51■■■□□ 2.16
MSLN-205ENST00000563941 AKNAQ7Z591 1439 aa28.51■■■□□ 2.15
MSLN-205ENST00000563941 RRP7BPQ9NSQ0 103 aa28.49■■■□□ 2.15
MSLN-205ENST00000563941 GRIN2AQ12879 1464 aa28.49■■■□□ 2.15
MSLN-205ENST00000563941 ARID3CA6NKF2 412 aa28.48■■■□□ 2.15
MSLN-205ENST00000563941 CHIC2Q9UKJ5 165 aa28.48■■■□□ 2.15
MSLN-205ENST00000563941 HIRIP3Q9BW71 556 aaPredicted RBP28.44■■■□□ 2.14
MSLN-205ENST00000563941 KCNH8Q96L42 1107 aa28.43■■■□□ 2.14
MSLN-205ENST00000563941 KDM6BO15054 1643 aa28.43■■■□□ 2.14
MSLN-205ENST00000563941 RAPGEF6Q8TEU7 1601 aa28.43■■■□□ 2.14
MSLN-205ENST00000563941 NUP153P49790 1475 aaKnown RBP28.41■■■□□ 2.14
MSLN-205ENST00000563941 KDM5BQ9UGL1 1544 aa28.41■■■□□ 2.14
MSLN-205ENST00000563941 DENND4BO75064 1496 aaPredicted RBP28.39■■■□□ 2.13
MSLN-205ENST00000563941 MAGI1Q96QZ7 1491 aaPredicted RBP28.36■■■□□ 2.13
MSLN-205ENST00000563941 TRIM52Q96A61 297 aa28.35■■■□□ 2.13
MSLN-205ENST00000563941 DNMT1P26358 1616 aaKnown RBP28.32■■■□□ 2.12
MSLN-205ENST00000563941 DAPK1P53355 1430 aa28.32■■■□□ 2.12
MSLN-205ENST00000563941 CEP170Q5SW79 1584 aa28.31■■■□□ 2.12
MSLN-205ENST00000563941 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
MSLN-205ENST00000563941 ROCK1Q13464 1354 aa28.29■■■□□ 2.12
MSLN-205ENST00000563941 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
MSLN-205ENST00000563941 MPHOSPH9Q99550 1183 aa28.27■■■□□ 2.12
MSLN-205ENST00000563941 ABCC5O15440 1437 aa28.26■■■□□ 2.12
MSLN-205ENST00000563941 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
MSLN-205ENST00000563941 SUPT16HQ9Y5B9 1047 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms