RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
TCF4-221ENST00000563888 POLA2Q14181 598 aa14.09□□□□□ -0.15
TCF4-221ENST00000563888 RSF1Q96T23 1441 aaPredicted RBP14.06□□□□□ -0.16
TCF4-221ENST00000563888 WIZO95785 1651 aa14.05□□□□□ -0.16
TCF4-221ENST00000563888 AQRO60306 1485 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCF4-221ENST00000563888 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
TCF4-221ENST00000563888 CHD1O14646 1710 aa13.96□□□□□ -0.17
TCF4-221ENST00000563888 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
TCF4-221ENST00000563888 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
TCF4-221ENST00000563888 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
TCF4-221ENST00000563888 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
TCF4-221ENST00000563888 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
TCF4-221ENST00000563888 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
TCF4-221ENST00000563888 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
TCF4-221ENST00000563888 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
TCF4-221ENST00000563888 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
TCF4-221ENST00000563888 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
TCF4-221ENST00000563888 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
TCF4-221ENST00000563888 CLASP1Q7Z460 1538 aa13.82□□□□□ -0.2
TCF4-221ENST00000563888 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
TCF4-221ENST00000563888 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
TCF4-221ENST00000563888 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
TCF4-221ENST00000563888 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
TCF4-221ENST00000563888 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
TCF4-221ENST00000563888 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
TCF4-221ENST00000563888 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
TCF4-221ENST00000563888 SYNJ1O43426 1573 aa13.77□□□□□ -0.21
TCF4-221ENST00000563888 POLA1P09884 1462 aaPredicted RBP13.75□□□□□ -0.21
TCF4-221ENST00000563888 SOGA1O94964 1423 aa13.75□□□□□ -0.21
TCF4-221ENST00000563888 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
TCF4-221ENST00000563888 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
TCF4-221ENST00000563888 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
TCF4-221ENST00000563888 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
TCF4-221ENST00000563888 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
TCF4-221ENST00000563888 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
TCF4-221ENST00000563888 PROM2Q8N271 834 aa13.65□□□□□ -0.22
TCF4-221ENST00000563888 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
TCF4-221ENST00000563888 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
TCF4-221ENST00000563888 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
TCF4-221ENST00000563888 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
TCF4-221ENST00000563888 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
TCF4-221ENST00000563888 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
TCF4-221ENST00000563888 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
TCF4-221ENST00000563888 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
TCF4-221ENST00000563888 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
TCF4-221ENST00000563888 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
TCF4-221ENST00000563888 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
TCF4-221ENST00000563888 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
TCF4-221ENST00000563888 ABCC10Q5T3U5 1492 aa13.51□□□□□ -0.25
TCF4-221ENST00000563888 POTEHQ6S545 545 aa13.51□□□□□ -0.25
TCF4-221ENST00000563888 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
TCF4-221ENST00000563888 KDM6BO15054 1643 aa13.49□□□□□ -0.25
TCF4-221ENST00000563888 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
TCF4-221ENST00000563888 CUX1P39880 1505 aa13.45□□□□□ -0.26
TCF4-221ENST00000563888 PRG4Q92954 1404 aaPredicted RBP13.45□□□□□ -0.26
TCF4-221ENST00000563888 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
TCF4-221ENST00000563888 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
TCF4-221ENST00000563888 NUP160Q12769 1436 aa13.43□□□□□ -0.26
TCF4-221ENST00000563888 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
TCF4-221ENST00000563888 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
TCF4-221ENST00000563888 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
TCF4-221ENST00000563888 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
TCF4-221ENST00000563888 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
TCF4-221ENST00000563888 DIP2BQ9P265 1576 aa13.39□□□□□ -0.27
TCF4-221ENST00000563888 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
TCF4-221ENST00000563888 MAPKBP1O60336 1514 aa13.36□□□□□ -0.27
TCF4-221ENST00000563888 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
TCF4-221ENST00000563888 TSPOAP1O95153 1857 aa13.36□□□□□ -0.27
TCF4-221ENST00000563888 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
TCF4-221ENST00000563888 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
TCF4-221ENST00000563888 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
TCF4-221ENST00000563888 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
TCF4-221ENST00000563888 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
TCF4-221ENST00000563888 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
TCF4-221ENST00000563888 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
TCF4-221ENST00000563888 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
TCF4-221ENST00000563888 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
TCF4-221ENST00000563888 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
TCF4-221ENST00000563888 ADCY10Q96PN6 1610 aa13.28□□□□□ -0.28
TCF4-221ENST00000563888 SOCS7O14512 581 aa13.26□□□□□ -0.29
TCF4-221ENST00000563888 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
TCF4-221ENST00000563888 MIER1Q8N108 512 aa13.25□□□□□ -0.29
TCF4-221ENST00000563888 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
TCF4-221ENST00000563888 COL17A1Q9UMD9 1497 aaPredicted RBP13.23□□□□□ -0.29
TCF4-221ENST00000563888 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
TCF4-221ENST00000563888 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
TCF4-221ENST00000563888 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
TCF4-221ENST00000563888 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
TCF4-221ENST00000563888 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
TCF4-221ENST00000563888 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
TCF4-221ENST00000563888 PTPRGP23470 1445 aa13.16□□□□□ -0.3
TCF4-221ENST00000563888 ERICH3Q5RHP9 1530 aa13.14□□□□□ -0.31
TCF4-221ENST00000563888 PLB1Q6P1J6 1458 aa13.13□□□□□ -0.31
TCF4-221ENST00000563888 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
TCF4-221ENST00000563888 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
TCF4-221ENST00000563888 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
TCF4-221ENST00000563888 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
TCF4-221ENST00000563888 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
TCF4-221ENST00000563888 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
TCF4-221ENST00000563888 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms