RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
CYLD-205ENST00000563629 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
CYLD-205ENST00000563629 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
CYLD-205ENST00000563629 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
CYLD-205ENST00000563629 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
CYLD-205ENST00000563629 ITGAEP38570 1179 aa11.53□□□□□ -0.56
CYLD-205ENST00000563629 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
CYLD-205ENST00000563629 WDR97A6NE52 1622 aa11.51□□□□□ -0.57
CYLD-205ENST00000563629 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
CYLD-205ENST00000563629 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
CYLD-205ENST00000563629 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
CYLD-205ENST00000563629 YTHDC1Q96MU7 727 aaKnown RBP11.5□□□□□ -0.57
CYLD-205ENST00000563629 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
CYLD-205ENST00000563629 ARID3CA6NKF2 412 aa11.49□□□□□ -0.57
CYLD-205ENST00000563629 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
CYLD-205ENST00000563629 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
CYLD-205ENST00000563629 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
CYLD-205ENST00000563629 ACIN1Q9UKV3 1341 aaKnown RBP11.45□□□□□ -0.58
CYLD-205ENST00000563629 FHAD1B1AJZ9 1412 aa11.44□□□□□ -0.58
CYLD-205ENST00000563629 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
CYLD-205ENST00000563629 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
CYLD-205ENST00000563629 CENPBP07199 599 aaPredicted RBP11.4□□□□□ -0.58
CYLD-205ENST00000563629 MIER1Q8N108 512 aa11.4□□□□□ -0.58
CYLD-205ENST00000563629 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
CYLD-205ENST00000563629 CUL7Q14999 1698 aa11.39□□□□□ -0.59
CYLD-205ENST00000563629 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
CYLD-205ENST00000563629 ADAMTS12P58397 1594 aa11.38□□□□□ -0.59
CYLD-205ENST00000563629 GRIN2AQ12879 1464 aa11.36□□□□□ -0.59
CYLD-205ENST00000563629 CCNB3Q8WWL7 1395 aa11.36□□□□□ -0.59
CYLD-205ENST00000563629 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
CYLD-205ENST00000563629 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
CYLD-205ENST00000563629 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
CYLD-205ENST00000563629 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
CYLD-205ENST00000563629 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
CYLD-205ENST00000563629 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
CYLD-205ENST00000563629 PCF11O94913 1555 aaKnown RBP11.32□□□□□ -0.6
CYLD-205ENST00000563629 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
CYLD-205ENST00000563629 PHLDB1Q86UU1 1377 aa11.29□□□□□ -0.6
CYLD-205ENST00000563629 RAB3GAP2Q9H2M9 1393 aa11.29□□□□□ -0.6
CYLD-205ENST00000563629 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
CYLD-205ENST00000563629 LRRC9Q6ZRR7 1453 aa11.28□□□□□ -0.6
CYLD-205ENST00000563629 CTTNBP2Q8WZ74 1663 aa11.28□□□□□ -0.6
CYLD-205ENST00000563629 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
CYLD-205ENST00000563629 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
CYLD-205ENST00000563629 NUP160Q12769 1436 aa11.24□□□□□ -0.61
CYLD-205ENST00000563629 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
CYLD-205ENST00000563629 DISP1Q96F81 1524 aa11.24□□□□□ -0.61
CYLD-205ENST00000563629 CHD1O14646 1710 aa11.23□□□□□ -0.61
CYLD-205ENST00000563629 PRG4Q92954 1404 aaPredicted RBP11.23□□□□□ -0.61
CYLD-205ENST00000563629 CLSPNQ9HAW4 1339 aa11.23□□□□□ -0.61
CYLD-205ENST00000563629 SIN3AQ96ST3 1273 aa11.22□□□□□ -0.61
CYLD-205ENST00000563629 PLB1Q6P1J6 1458 aa11.21□□□□□ -0.62
CYLD-205ENST00000563629 SETD5Q9C0A6 1442 aa11.2□□□□□ -0.62
CYLD-205ENST00000563629 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
CYLD-205ENST00000563629 MAPKBP1O60336 1514 aa11.2□□□□□ -0.62
CYLD-205ENST00000563629 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
CYLD-205ENST00000563629 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
CYLD-205ENST00000563629 SAMD9Q5K651 1589 aa11.19□□□□□ -0.62
CYLD-205ENST00000563629 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
CYLD-205ENST00000563629 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
CYLD-205ENST00000563629 UGGT2Q9NYU1 1516 aa11.18□□□□□ -0.62
CYLD-205ENST00000563629 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
CYLD-205ENST00000563629 CASKIN1Q8WXD9 1431 aa11.17□□□□□ -0.62
CYLD-205ENST00000563629 HIRIP3Q9BW71 556 aaPredicted RBP11.17□□□□□ -0.62
CYLD-205ENST00000563629 CDK13Q14004 1512 aaKnown RBP11.17□□□□□ -0.62
CYLD-205ENST00000563629 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
CYLD-205ENST00000563629 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
CYLD-205ENST00000563629 CARMIL2Q6F5E8 1435 aa11.16□□□□□ -0.62
CYLD-205ENST00000563629 PTPRGP23470 1445 aa11.15□□□□□ -0.63
CYLD-205ENST00000563629 LRRIQ1Q96JM4 1722 aa11.14□□□□□ -0.63
CYLD-205ENST00000563629 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
CYLD-205ENST00000563629 FGD6Q6ZV73 1430 aa11.11□□□□□ -0.63
CYLD-205ENST00000563629 EPRSP07814 1512 aaKnown RBP11.1□□□□□ -0.63
CYLD-205ENST00000563629 MAGI3Q5TCQ9 1506 aa11.1□□□□□ -0.63
CYLD-205ENST00000563629 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
CYLD-205ENST00000563629 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
CYLD-205ENST00000563629 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
CYLD-205ENST00000563629 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
CYLD-205ENST00000563629 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
CYLD-205ENST00000563629 NCOA2Q15596 1464 aa11.08□□□□□ -0.64
CYLD-205ENST00000563629 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
CYLD-205ENST00000563629 CYB5RLQ6IPT4 315 aa11.07□□□□□ -0.64
CYLD-205ENST00000563629 PTPRKQ15262 1439 aa11.07□□□□□ -0.64
CYLD-205ENST00000563629 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
CYLD-205ENST00000563629 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
CYLD-205ENST00000563629 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
CYLD-205ENST00000563629 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
CYLD-205ENST00000563629 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
CYLD-205ENST00000563629 ATP10BO94823 1461 aa11.04□□□□□ -0.64
CYLD-205ENST00000563629 RAPGEF6Q8TEU7 1601 aa11.04□□□□□ -0.64
CYLD-205ENST00000563629 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
CYLD-205ENST00000563629 CDK11AQ9UQ88 783 aaPredicted RBP11.03□□□□□ -0.64
CYLD-205ENST00000563629 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
CYLD-205ENST00000563629 PTPN23Q9H3S7 1636 aa11.03□□□□□ -0.64
CYLD-205ENST00000563629 UACAQ9BZF9 1416 aa11.02□□□□□ -0.64
CYLD-205ENST00000563629 HECW1Q76N89 1606 aa11.02□□□□□ -0.65
CYLD-205ENST00000563629 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.65
CYLD-205ENST00000563629 TRIM52Q96A61 297 aa11.01□□□□□ -0.65
CYLD-205ENST00000563629 SHROOM2Q13796 1616 aa11□□□□□ -0.65
CYLD-205ENST00000563629 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms