RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
CNN2-204ENST00000562075 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
CNN2-204ENST00000562075 FBLN2P98095 1184 aa22.53■■□□□ 1.2
CNN2-204ENST00000562075 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
CNN2-204ENST00000562075 VPS8Q8N3P4 1428 aa22.51■■□□□ 1.19
CNN2-204ENST00000562075 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
CNN2-204ENST00000562075 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
CNN2-204ENST00000562075 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
CNN2-204ENST00000562075 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
CNN2-204ENST00000562075 CHD1O14646 1710 aa22.45■■□□□ 1.18
CNN2-204ENST00000562075 NUP160Q12769 1436 aa22.44■■□□□ 1.18
CNN2-204ENST00000562075 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
CNN2-204ENST00000562075 P3H3Q8IVL6 736 aa22.39■■□□□ 1.17
CNN2-204ENST00000562075 UGGT2Q9NYU1 1516 aa22.38■■□□□ 1.17
CNN2-204ENST00000562075 FHOD3Q2V2M9 1422 aa22.38■■□□□ 1.17
CNN2-204ENST00000562075 APLP2Q06481 763 aa22.3■■□□□ 1.16
CNN2-204ENST00000562075 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
CNN2-204ENST00000562075 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
CNN2-204ENST00000562075 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
CNN2-204ENST00000562075 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
CNN2-204ENST00000562075 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
CNN2-204ENST00000562075 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
CNN2-204ENST00000562075 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
CNN2-204ENST00000562075 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
CNN2-204ENST00000562075 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
CNN2-204ENST00000562075 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
CNN2-204ENST00000562075 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
CNN2-204ENST00000562075 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
CNN2-204ENST00000562075 TRIM26Q12899 539 aaPredicted RBP22.16■■□□□ 1.14
CNN2-204ENST00000562075 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
CNN2-204ENST00000562075 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
CNN2-204ENST00000562075 TIAM1Q13009 1591 aa22.14■■□□□ 1.13
CNN2-204ENST00000562075 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
CNN2-204ENST00000562075 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
CNN2-204ENST00000562075 HECW1Q76N89 1606 aa22.1■■□□□ 1.13
CNN2-204ENST00000562075 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
CNN2-204ENST00000562075 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
CNN2-204ENST00000562075 RAPGEF6Q8TEU7 1601 aa22.05■■□□□ 1.12
CNN2-204ENST00000562075 LRRIQ1Q96JM4 1722 aa22.04■■□□□ 1.12
CNN2-204ENST00000562075 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
CNN2-204ENST00000562075 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
CNN2-204ENST00000562075 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
CNN2-204ENST00000562075 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
CNN2-204ENST00000562075 PTPRGP23470 1445 aa21.98■■□□□ 1.11
CNN2-204ENST00000562075 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
CNN2-204ENST00000562075 PLB1Q6P1J6 1458 aa21.97■■□□□ 1.11
CNN2-204ENST00000562075 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
CNN2-204ENST00000562075 ABCA8O94911 1581 aa21.95■■□□□ 1.11
CNN2-204ENST00000562075 CDK13Q14004 1512 aaKnown RBP21.94■■□□□ 1.1
CNN2-204ENST00000562075 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
CNN2-204ENST00000562075 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
CNN2-204ENST00000562075 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
CNN2-204ENST00000562075 UACAQ9BZF9 1416 aa21.86■■□□□ 1.09
CNN2-204ENST00000562075 MAGI3Q5TCQ9 1506 aa21.85■■□□□ 1.09
CNN2-204ENST00000562075 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
CNN2-204ENST00000562075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.84■■□□□ 1.09
CNN2-204ENST00000562075 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
CNN2-204ENST00000562075 ABCC2Q92887 1545 aa21.81■■□□□ 1.08
CNN2-204ENST00000562075 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
CNN2-204ENST00000562075 ATP10BO94823 1461 aa21.79■■□□□ 1.08
CNN2-204ENST00000562075 PHLDB1Q86UU1 1377 aa21.79■■□□□ 1.08
CNN2-204ENST00000562075 RRBP1Q9P2E9 1410 aaKnown RBP21.79■■□□□ 1.08
CNN2-204ENST00000562075 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
CNN2-204ENST00000562075 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
CNN2-204ENST00000562075 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
CNN2-204ENST00000562075 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
CNN2-204ENST00000562075 ARHGEF11O15085 1522 aa21.74■■□□□ 1.07
CNN2-204ENST00000562075 MYOM3Q5VTT5 1437 aa21.7■■□□□ 1.06
CNN2-204ENST00000562075 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
CNN2-204ENST00000562075 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
CNN2-204ENST00000562075 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
CNN2-204ENST00000562075 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
CNN2-204ENST00000562075 KDM5BQ9UGL1 1544 aa21.66■■□□□ 1.06
CNN2-204ENST00000562075 KIF14Q15058 1648 aa21.66■■□□□ 1.06
CNN2-204ENST00000562075 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
CNN2-204ENST00000562075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.6■■□□□ 1.051e-6■□□□□ 11.1
CNN2-204ENST00000562075 PTPN23Q9H3S7 1636 aa21.59■■□□□ 1.05
CNN2-204ENST00000562075 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.05
CNN2-204ENST00000562075 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.05
CNN2-204ENST00000562075 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.05
CNN2-204ENST00000562075 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
CNN2-204ENST00000562075 ITSN2Q9NZM3 1697 aa21.58■■□□□ 1.05
CNN2-204ENST00000562075 TCOF1Q13428 1488 aaKnown RBP21.55■■□□□ 1.04
CNN2-204ENST00000562075 ABCC10Q5T3U5 1492 aa21.55■■□□□ 1.04
CNN2-204ENST00000562075 ITGAEP38570 1179 aa21.54■■□□□ 1.04
CNN2-204ENST00000562075 GPATCH8Q9UKJ3 1502 aaKnown RBP21.52■■□□□ 1.04
CNN2-204ENST00000562075 NPM1P06748 294 aaKnown RBP eCLIP21.5■■□□□ 1.03
CNN2-204ENST00000562075 CDC42BPAQ5VT25 1732 aa21.49■■□□□ 1.03
CNN2-204ENST00000562075 WDR7Q9Y4E6 1490 aa21.48■■□□□ 1.03
CNN2-204ENST00000562075 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
CNN2-204ENST00000562075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.47■■□□□ 1.032e-6■□□□□ 8.3
CNN2-204ENST00000562075 TTC37Q6PGP7 1564 aa21.47■■□□□ 1.03
CNN2-204ENST00000562075 KCNH8Q96L42 1107 aa21.46■■□□□ 1.03
CNN2-204ENST00000562075 ASXL2Q76L83 1435 aa21.45■■□□□ 1.02
CNN2-204ENST00000562075 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
CNN2-204ENST00000562075 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
CNN2-204ENST00000562075 CAMSAP2Q08AD1 1489 aa21.44■■□□□ 1.02
CNN2-204ENST00000562075 MYO5CQ9NQX4 1742 aa21.42■■□□□ 1.02
CNN2-204ENST00000562075 ZNF644Q9H582 1327 aaPredicted RBP21.4■■□□□ 1.02
CNN2-204ENST00000562075 ZNF777Q9ULD5 760 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms