RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 KIF21BO75037 1637 aa23.2■■□□□ 1.3
IFT140-205ENST00000561954 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
IFT140-205ENST00000561954 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
IFT140-205ENST00000561954 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
IFT140-205ENST00000561954 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
IFT140-205ENST00000561954 IQGAP2Q13576 1575 aa23.17■■□□□ 1.3
IFT140-205ENST00000561954 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
IFT140-205ENST00000561954 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
IFT140-205ENST00000561954 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
IFT140-205ENST00000561954 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
IFT140-205ENST00000561954 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
IFT140-205ENST00000561954 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
IFT140-205ENST00000561954 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
IFT140-205ENST00000561954 CARMIL2Q6F5E8 1435 aa23.01■■□□□ 1.27
IFT140-205ENST00000561954 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
IFT140-205ENST00000561954 DISP1Q96F81 1524 aa22.93■■□□□ 1.26
IFT140-205ENST00000561954 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
IFT140-205ENST00000561954 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
IFT140-205ENST00000561954 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
IFT140-205ENST00000561954 SAMD9Q5K651 1589 aa22.87■■□□□ 1.25
IFT140-205ENST00000561954 EFCAB5A4FU69 1503 aa22.86■■□□□ 1.25
IFT140-205ENST00000561954 PTPRGP23470 1445 aa22.82■■□□□ 1.24
IFT140-205ENST00000561954 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
IFT140-205ENST00000561954 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
IFT140-205ENST00000561954 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
IFT140-205ENST00000561954 UACAQ9BZF9 1416 aa22.7■■□□□ 1.22
IFT140-205ENST00000561954 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
IFT140-205ENST00000561954 TTBK1Q5TCY1 1321 aaPredicted RBP22.68■■□□□ 1.22
IFT140-205ENST00000561954 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
IFT140-205ENST00000561954 FHOD3Q2V2M9 1422 aa22.67■■□□□ 1.22
IFT140-205ENST00000561954 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
IFT140-205ENST00000561954 ABCA8O94911 1581 aa22.65■■□□□ 1.22
IFT140-205ENST00000561954 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
IFT140-205ENST00000561954 CLIP1P30622 1438 aa22.63■■□□□ 1.21
IFT140-205ENST00000561954 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
IFT140-205ENST00000561954 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
IFT140-205ENST00000561954 NPM1P06748 294 aaKnown RBP eCLIP22.6■■□□□ 1.21
IFT140-205ENST00000561954 MAPKBP1O60336 1514 aa22.59■■□□□ 1.21
IFT140-205ENST00000561954 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
IFT140-205ENST00000561954 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
IFT140-205ENST00000561954 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
IFT140-205ENST00000561954 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
IFT140-205ENST00000561954 HECW1Q76N89 1606 aa22.5■■□□□ 1.19
IFT140-205ENST00000561954 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
IFT140-205ENST00000561954 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
IFT140-205ENST00000561954 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
IFT140-205ENST00000561954 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
IFT140-205ENST00000561954 FYCO1Q9BQS8 1478 aa22.43■■□□□ 1.18
IFT140-205ENST00000561954 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
IFT140-205ENST00000561954 CASKIN1Q8WXD9 1431 aa22.41■■□□□ 1.18
IFT140-205ENST00000561954 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
IFT140-205ENST00000561954 ATP10BO94823 1461 aa22.41■■□□□ 1.18
IFT140-205ENST00000561954 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
IFT140-205ENST00000561954 TRHP20396 242 aaPredicted RBP22.38■■□□□ 1.17
IFT140-205ENST00000561954 CCDC18Q5T9S5 1454 aa22.37■■□□□ 1.17
IFT140-205ENST00000561954 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
IFT140-205ENST00000561954 GLI2P10070 1586 aa22.33■■□□□ 1.16
IFT140-205ENST00000561954 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
IFT140-205ENST00000561954 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
IFT140-205ENST00000561954 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
IFT140-205ENST00000561954 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
IFT140-205ENST00000561954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
IFT140-205ENST00000561954 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
IFT140-205ENST00000561954 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
IFT140-205ENST00000561954 FAM69CQ0P6D2 419 aa22.27■■□□□ 1.16
IFT140-205ENST00000561954 CDK11AQ9UQ88 783 aaPredicted RBP22.26■■□□□ 1.15
IFT140-205ENST00000561954 LRRIQ1Q96JM4 1722 aa22.25■■□□□ 1.15
IFT140-205ENST00000561954 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
IFT140-205ENST00000561954 MAP3K4Q9Y6R4 1608 aa22.22■■□□□ 1.15
IFT140-205ENST00000561954 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
IFT140-205ENST00000561954 TROQ12816 1431 aaPredicted RBP22.19■■□□□ 1.14
IFT140-205ENST00000561954 KIF14Q15058 1648 aa22.19■■□□□ 1.14
IFT140-205ENST00000561954 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
IFT140-205ENST00000561954 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
IFT140-205ENST00000561954 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
IFT140-205ENST00000561954 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
IFT140-205ENST00000561954 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
IFT140-205ENST00000561954 MAP3K1Q13233 1512 aa22.12■■□□□ 1.13
IFT140-205ENST00000561954 MAGI3Q5TCQ9 1506 aa22.12■■□□□ 1.13
IFT140-205ENST00000561954 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
IFT140-205ENST00000561954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.13
IFT140-205ENST00000561954 TTC37Q6PGP7 1564 aa22.1■■□□□ 1.13
IFT140-205ENST00000561954 PPRC1Q5VV67 1664 aaKnown RBP22.1■■□□□ 1.13
IFT140-205ENST00000561954 MTUS2Q5JR59 1369 aa22.09■■□□□ 1.13
IFT140-205ENST00000561954 TSPOAP1O95153 1857 aa22.08■■□□□ 1.13
IFT140-205ENST00000561954 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
IFT140-205ENST00000561954 ARAP3Q8WWN8 1544 aa22.04■■□□□ 1.12
IFT140-205ENST00000561954 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
IFT140-205ENST00000561954 APLP2Q06481 763 aa22.02■■□□□ 1.12
IFT140-205ENST00000561954 NEO1Q92859 1461 aa22.01■■□□□ 1.11
IFT140-205ENST00000561954 LRRC9Q6ZRR7 1453 aa22■■□□□ 1.11
IFT140-205ENST00000561954 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
IFT140-205ENST00000561954 KDM6BO15054 1643 aa21.99■■□□□ 1.11
IFT140-205ENST00000561954 SUPT6HQ7KZ85 1726 aaKnown RBP21.98■■□□□ 1.11
IFT140-205ENST00000561954 PREX2Q70Z35 1606 aa21.98■■□□□ 1.11
IFT140-205ENST00000561954 PLCH2O75038 1416 aa21.97■■□□□ 1.11
IFT140-205ENST00000561954 FANCAO15360 1455 aa21.96■■□□□ 1.11
IFT140-205ENST00000561954 ARHGAP5Q13017 1502 aa21.94■■□□□ 1.1
IFT140-205ENST00000561954 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
IFT140-205ENST00000561954 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms