RNA–Protein interactions for RNA: ENST00000561857.1

SPN-204, Transcript of sialophorin, humanhuman

Gene SPN, Length 2,077 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-204ENST00000561857 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
SPN-204ENST00000561857 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
SPN-204ENST00000561857 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
SPN-204ENST00000561857 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
SPN-204ENST00000561857 CUL7Q14999 1698 aa16.3■□□□□ 0.2
SPN-204ENST00000561857 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
SPN-204ENST00000561857 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
SPN-204ENST00000561857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
SPN-204ENST00000561857 MSH5O43196 834 aa16.25■□□□□ 0.19
SPN-204ENST00000561857 ARXQ96QS3 562 aa16.25■□□□□ 0.19
SPN-204ENST00000561857 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
SPN-204ENST00000561857 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
SPN-204ENST00000561857 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
SPN-204ENST00000561857 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
SPN-204ENST00000561857 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
SPN-204ENST00000561857 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
SPN-204ENST00000561857 EFCAB5A4FU69 1503 aa16.18■□□□□ 0.18
SPN-204ENST00000561857 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
SPN-204ENST00000561857 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
SPN-204ENST00000561857 WDR62O43379 1518 aa16.17■□□□□ 0.18
SPN-204ENST00000561857 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
SPN-204ENST00000561857 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
SPN-204ENST00000561857 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
SPN-204ENST00000561857 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
SPN-204ENST00000561857 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
SPN-204ENST00000561857 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
SPN-204ENST00000561857 CFAP43Q8NDM7 1665 aa16.09■□□□□ 0.17
SPN-204ENST00000561857 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
SPN-204ENST00000561857 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
SPN-204ENST00000561857 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.17
SPN-204ENST00000561857 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
SPN-204ENST00000561857 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
SPN-204ENST00000561857 FYCO1Q9BQS8 1478 aa16.06■□□□□ 0.16
SPN-204ENST00000561857 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
SPN-204ENST00000561857 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
SPN-204ENST00000561857 SAMD9Q5K651 1589 aa16.04■□□□□ 0.16
SPN-204ENST00000561857 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
SPN-204ENST00000561857 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
SPN-204ENST00000561857 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
SPN-204ENST00000561857 CCNB3Q8WWL7 1395 aa16.02■□□□□ 0.16
SPN-204ENST00000561857 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
SPN-204ENST00000561857 FMN1Q68DA7 1419 aa16.01■□□□□ 0.15
SPN-204ENST00000561857 CLSPNQ9HAW4 1339 aa16■□□□□ 0.15
SPN-204ENST00000561857 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
SPN-204ENST00000561857 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
SPN-204ENST00000561857 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
SPN-204ENST00000561857 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
SPN-204ENST00000561857 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
SPN-204ENST00000561857 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
SPN-204ENST00000561857 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
SPN-204ENST00000561857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
SPN-204ENST00000561857 IQGAP2Q13576 1575 aa15.89■□□□□ 0.13
SPN-204ENST00000561857 PHLDB1Q86UU1 1377 aa15.89■□□□□ 0.13
SPN-204ENST00000561857 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
SPN-204ENST00000561857 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
SPN-204ENST00000561857 UGGT2Q9NYU1 1516 aa15.83■□□□□ 0.12
SPN-204ENST00000561857 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
SPN-204ENST00000561857 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
SPN-204ENST00000561857 EHBP1L1Q8N3D4 1523 aa15.81■□□□□ 0.12
SPN-204ENST00000561857 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
SPN-204ENST00000561857 HECW1Q76N89 1606 aa15.8■□□□□ 0.12
SPN-204ENST00000561857 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
SPN-204ENST00000561857 SUPT6HQ7KZ85 1726 aaKnown RBP15.79■□□□□ 0.12
SPN-204ENST00000561857 GRIN2AQ12879 1464 aa15.79■□□□□ 0.12
SPN-204ENST00000561857 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
SPN-204ENST00000561857 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
SPN-204ENST00000561857 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
SPN-204ENST00000561857 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
SPN-204ENST00000561857 RAB3GAP2Q9H2M9 1393 aa15.77■□□□□ 0.12
SPN-204ENST00000561857 SYNJ2O15056 1496 aa15.77■□□□□ 0.12
SPN-204ENST00000561857 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
SPN-204ENST00000561857 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.11
SPN-204ENST00000561857 FBLN2P98095 1184 aa15.76■□□□□ 0.11
SPN-204ENST00000561857 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
SPN-204ENST00000561857 NCOA2Q15596 1464 aa15.73■□□□□ 0.11
SPN-204ENST00000561857 FAM50AQ14320 339 aaKnown RBP15.73■□□□□ 0.11
SPN-204ENST00000561857 ITGAEP38570 1179 aa15.72■□□□□ 0.11
SPN-204ENST00000561857 MYOM3Q5VTT5 1437 aa15.72■□□□□ 0.11
SPN-204ENST00000561857 KIAA0556O60303 1618 aa15.72■□□□□ 0.11
SPN-204ENST00000561857 TULP1O00294 542 aaPredicted RBP15.71■□□□□ 0.1
SPN-204ENST00000561857 EPRSP07814 1512 aaKnown RBP15.7■□□□□ 0.1
SPN-204ENST00000561857 NUP160Q12769 1436 aa15.7■□□□□ 0.1
SPN-204ENST00000561857 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
SPN-204ENST00000561857 MAPKBP1O60336 1514 aa15.69■□□□□ 0.1
SPN-204ENST00000561857 DISP1Q96F81 1524 aa15.69■□□□□ 0.1
SPN-204ENST00000561857 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
SPN-204ENST00000561857 MAGI3Q5TCQ9 1506 aa15.68■□□□□ 0.1
SPN-204ENST00000561857 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
SPN-204ENST00000561857 HOMEZQ8IX15 550 aa15.66■□□□□ 0.1
SPN-204ENST00000561857 PTPN23Q9H3S7 1636 aa15.66■□□□□ 0.1
SPN-204ENST00000561857 TCOF1Q13428 1488 aaKnown RBP15.65■□□□□ 0.1
SPN-204ENST00000561857 HFM1A2PYH4 1435 aa15.64■□□□□ 0.09
SPN-204ENST00000561857 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
SPN-204ENST00000561857 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
SPN-204ENST00000561857 CDK13Q14004 1512 aaKnown RBP15.61■□□□□ 0.09
SPN-204ENST00000561857 JPH4Q96JJ6 628 aa15.59■□□□□ 0.09
SPN-204ENST00000561857 AKNAQ7Z591 1439 aa15.59■□□□□ 0.09
SPN-204ENST00000561857 NUP153P49790 1475 aaKnown RBP15.58■□□□□ 0.08
SPN-204ENST00000561857 PTPRKQ15262 1439 aa15.58■□□□□ 0.08
SPN-204ENST00000561857 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms