RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
LINC00662-201ENST00000561521 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
LINC00662-201ENST00000561521 CFTRP13569 1480 aa14.07□□□□□ -0.16
LINC00662-201ENST00000561521 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
LINC00662-201ENST00000561521 WRNQ14191 1432 aaPredicted RBP eCLIP14.04□□□□□ -0.16
LINC00662-201ENST00000561521 ARXQ96QS3 562 aa14.02□□□□□ -0.16
LINC00662-201ENST00000561521 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.17
LINC00662-201ENST00000561521 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
LINC00662-201ENST00000561521 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
LINC00662-201ENST00000561521 WDR62O43379 1518 aa14□□□□□ -0.17
LINC00662-201ENST00000561521 FKBP8Q14318 412 aa14□□□□□ -0.17
LINC00662-201ENST00000561521 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
LINC00662-201ENST00000561521 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
LINC00662-201ENST00000561521 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
LINC00662-201ENST00000561521 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
LINC00662-201ENST00000561521 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
LINC00662-201ENST00000561521 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
LINC00662-201ENST00000561521 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
LINC00662-201ENST00000561521 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
LINC00662-201ENST00000561521 WASHC2CQ9Y4E1 1318 aa13.93□□□□□ -0.18
LINC00662-201ENST00000561521 RTL5Q5HYW3 569 aaPredicted RBP13.92□□□□□ -0.18
LINC00662-201ENST00000561521 ZMYND15Q9H091 742 aa13.9□□□□□ -0.18
LINC00662-201ENST00000561521 USP35Q9P2H5 1018 aa13.89□□□□□ -0.19
LINC00662-201ENST00000561521 BCANQ96GW7 911 aa13.88□□□□□ -0.19
LINC00662-201ENST00000561521 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
LINC00662-201ENST00000561521 FGD1P98174 961 aa13.83□□□□□ -0.2
LINC00662-201ENST00000561521 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
LINC00662-201ENST00000561521 PDE4CQ08493 712 aa13.81□□□□□ -0.2
LINC00662-201ENST00000561521 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
LINC00662-201ENST00000561521 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
LINC00662-201ENST00000561521 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.2
LINC00662-201ENST00000561521 AAMPQ13685 434 aa13.77□□□□□ -0.21
LINC00662-201ENST00000561521 TOPBP1Q92547 1522 aa13.76□□□□□ -0.21
LINC00662-201ENST00000561521 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
LINC00662-201ENST00000561521 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
LINC00662-201ENST00000561521 NBR1Q14596 966 aa13.73□□□□□ -0.21
LINC00662-201ENST00000561521 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
LINC00662-201ENST00000561521 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
LINC00662-201ENST00000561521 RRP9O43818 475 aaKnown RBP13.71□□□□□ -0.21
LINC00662-201ENST00000561521 ZBTB22O15209 634 aa13.7□□□□□ -0.22
LINC00662-201ENST00000561521 ITGAEP38570 1179 aa13.7□□□□□ -0.22
LINC00662-201ENST00000561521 IPO9Q96P70 1041 aaKnown RBP13.69□□□□□ -0.22
LINC00662-201ENST00000561521 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
LINC00662-201ENST00000561521 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
LINC00662-201ENST00000561521 EEA1Q15075 1411 aa13.67□□□□□ -0.22
LINC00662-201ENST00000561521 PAK3O75914 559 aaPredicted RBP13.67□□□□□ -0.22
LINC00662-201ENST00000561521 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
LINC00662-201ENST00000561521 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
LINC00662-201ENST00000561521 PPP4R2Q9NY27 417 aa13.65□□□□□ -0.22
LINC00662-201ENST00000561521 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
LINC00662-201ENST00000561521 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
LINC00662-201ENST00000561521 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
LINC00662-201ENST00000561521 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
LINC00662-201ENST00000561521 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
LINC00662-201ENST00000561521 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
LINC00662-201ENST00000561521 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
LINC00662-201ENST00000561521 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
LINC00662-201ENST00000561521 CUX1P39880 1505 aa13.6□□□□□ -0.23
LINC00662-201ENST00000561521 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
LINC00662-201ENST00000561521 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
LINC00662-201ENST00000561521 NEFMP07197 916 aa13.56□□□□□ -0.24
LINC00662-201ENST00000561521 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
LINC00662-201ENST00000561521 HSP90AA2PQ14568 343 aaPredicted RBP13.55□□□□□ -0.24
LINC00662-201ENST00000561521 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
LINC00662-201ENST00000561521 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
LINC00662-201ENST00000561521 GSE1Q14687 1217 aa13.54□□□□□ -0.24
LINC00662-201ENST00000561521 ADRA2BP18089 450 aa13.53□□□□□ -0.24
LINC00662-201ENST00000561521 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
LINC00662-201ENST00000561521 CALD1Q05682 793 aaKnown RBP13.53□□□□□ -0.24
LINC00662-201ENST00000561521 SOGA1O94964 1423 aa13.52□□□□□ -0.24
LINC00662-201ENST00000561521 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.24
LINC00662-201ENST00000561521 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
LINC00662-201ENST00000561521 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
LINC00662-201ENST00000561521 HAP1P54257 671 aaPredicted RBP13.5□□□□□ -0.25
LINC00662-201ENST00000561521 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
LINC00662-201ENST00000561521 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
LINC00662-201ENST00000561521 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
LINC00662-201ENST00000561521 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
LINC00662-201ENST00000561521 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
LINC00662-201ENST00000561521 DHX57Q6P158 1386 aaKnown RBP13.47□□□□□ -0.25
LINC00662-201ENST00000561521 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
LINC00662-201ENST00000561521 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00662-201ENST00000561521 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
LINC00662-201ENST00000561521 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.25
LINC00662-201ENST00000561521 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.26
LINC00662-201ENST00000561521 CHD1O14646 1710 aa13.44□□□□□ -0.26
LINC00662-201ENST00000561521 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
LINC00662-201ENST00000561521 RSPH4AQ5TD94 716 aa13.44□□□□□ -0.26
LINC00662-201ENST00000561521 PRDM4Q9UKN5 801 aa13.44□□□□□ -0.26
LINC00662-201ENST00000561521 GRIN2BQ13224 1484 aa13.43□□□□□ -0.26
LINC00662-201ENST00000561521 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
LINC00662-201ENST00000561521 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
LINC00662-201ENST00000561521 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
LINC00662-201ENST00000561521 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
LINC00662-201ENST00000561521 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
LINC00662-201ENST00000561521 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
LINC00662-201ENST00000561521 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
LINC00662-201ENST00000561521 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
LINC00662-201ENST00000561521 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
LINC00662-201ENST00000561521 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms