RNA–Protein interactions for RNA: ENST00000561449.1

TCF12-226, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-226ENST00000561449 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
TCF12-226ENST00000561449 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
TCF12-226ENST00000561449 CHMP7Q8WUX9 453 aaPredicted RBP13.31□□□□□ -0.28
TCF12-226ENST00000561449 FBLN2P98095 1184 aa13.29□□□□□ -0.28
TCF12-226ENST00000561449 CHD1O14646 1710 aa13.29□□□□□ -0.28
TCF12-226ENST00000561449 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
TCF12-226ENST00000561449 IGF1RP08069 1367 aa13.28□□□□□ -0.28
TCF12-226ENST00000561449 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
TCF12-226ENST00000561449 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
TCF12-226ENST00000561449 CUL7Q14999 1698 aa13.24□□□□□ -0.29
TCF12-226ENST00000561449 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
TCF12-226ENST00000561449 RUSC2Q8N2Y8 1516 aa13.2□□□□□ -0.3
TCF12-226ENST00000561449 NUP160Q12769 1436 aa13.19□□□□□ -0.3
TCF12-226ENST00000561449 EEA1Q15075 1411 aa13.19□□□□□ -0.3
TCF12-226ENST00000561449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.31e-7■□□□□ 9.4
TCF12-226ENST00000561449 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
TCF12-226ENST00000561449 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
TCF12-226ENST00000561449 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
TCF12-226ENST00000561449 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
TCF12-226ENST00000561449 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
TCF12-226ENST00000561449 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
TCF12-226ENST00000561449 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
TCF12-226ENST00000561449 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
TCF12-226ENST00000561449 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
TCF12-226ENST00000561449 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
TCF12-226ENST00000561449 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
TCF12-226ENST00000561449 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
TCF12-226ENST00000561449 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
TCF12-226ENST00000561449 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
TCF12-226ENST00000561449 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
TCF12-226ENST00000561449 KIF21BO75037 1637 aa13□□□□□ -0.33
TCF12-226ENST00000561449 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
TCF12-226ENST00000561449 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
TCF12-226ENST00000561449 CTTNBP2Q8WZ74 1663 aa12.98□□□□□ -0.33
TCF12-226ENST00000561449 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
TCF12-226ENST00000561449 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
TCF12-226ENST00000561449 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
TCF12-226ENST00000561449 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.34
TCF12-226ENST00000561449 GOLGA3Q08378 1498 aa12.93□□□□□ -0.34
TCF12-226ENST00000561449 DISP1Q96F81 1524 aa12.91□□□□□ -0.34
TCF12-226ENST00000561449 TNIKQ9UKE5 1360 aa12.9□□□□□ -0.34
TCF12-226ENST00000561449 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
TCF12-226ENST00000561449 PTPRGP23470 1445 aa12.88□□□□□ -0.35
TCF12-226ENST00000561449 KIAA0556O60303 1618 aa12.88□□□□□ -0.35
TCF12-226ENST00000561449 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
TCF12-226ENST00000561449 SAMD9Q5K651 1589 aa12.83□□□□□ -0.36
TCF12-226ENST00000561449 EFCAB5A4FU69 1503 aa12.82□□□□□ -0.36
TCF12-226ENST00000561449 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
TCF12-226ENST00000561449 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
TCF12-226ENST00000561449 UHRF1BP1LA0JNW5 1464 aa12.79□□□□□ -0.36
TCF12-226ENST00000561449 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
TCF12-226ENST00000561449 ADCY10Q96PN6 1610 aa12.77□□□□□ -0.36
TCF12-226ENST00000561449 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.37
TCF12-226ENST00000561449 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
TCF12-226ENST00000561449 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
TCF12-226ENST00000561449 ABCC2Q92887 1545 aa12.76□□□□□ -0.37
TCF12-226ENST00000561449 CAPN15O75808 1086 aa12.75□□□□□ -0.37
TCF12-226ENST00000561449 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
TCF12-226ENST00000561449 ABCA8O94911 1581 aa12.74□□□□□ -0.37
TCF12-226ENST00000561449 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
TCF12-226ENST00000561449 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
TCF12-226ENST00000561449 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
TCF12-226ENST00000561449 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
TCF12-226ENST00000561449 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
TCF12-226ENST00000561449 DSG3P32926 999 aa12.71□□□□□ -0.37
TCF12-226ENST00000561449 FMN1Q68DA7 1419 aa12.71□□□□□ -0.38
TCF12-226ENST00000561449 CLIP1P30622 1438 aa12.7□□□□□ -0.38
TCF12-226ENST00000561449 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
TCF12-226ENST00000561449 RAPGEF6Q8TEU7 1601 aa12.68□□□□□ -0.38
TCF12-226ENST00000561449 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
TCF12-226ENST00000561449 KCNA4P22459 653 aa12.66□□□□□ -0.38
TCF12-226ENST00000561449 ZCCHC11Q5TAX3 1644 aaKnown RBP12.66□□□□□ -0.38
TCF12-226ENST00000561449 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
TCF12-226ENST00000561449 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
TCF12-226ENST00000561449 ASXL2Q76L83 1435 aa12.64□□□□□ -0.39
TCF12-226ENST00000561449 ATP10BO94823 1461 aa12.64□□□□□ -0.39
TCF12-226ENST00000561449 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
TCF12-226ENST00000561449 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
TCF12-226ENST00000561449 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
TCF12-226ENST00000561449 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
TCF12-226ENST00000561449 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
TCF12-226ENST00000561449 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
TCF12-226ENST00000561449 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
TCF12-226ENST00000561449 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
TCF12-226ENST00000561449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
TCF12-226ENST00000561449 GLI2P10070 1586 aa12.58□□□□□ -0.4
TCF12-226ENST00000561449 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
TCF12-226ENST00000561449 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
TCF12-226ENST00000561449 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
TCF12-226ENST00000561449 ARID3CA6NKF2 412 aa12.57□□□□□ -0.4
TCF12-226ENST00000561449 FYCO1Q9BQS8 1478 aa12.57□□□□□ -0.4
TCF12-226ENST00000561449 ATP1B4Q9UN42 357 aaPredicted RBP12.56□□□□□ -0.4
TCF12-226ENST00000561449 CDK11AQ9UQ88 783 aaPredicted RBP12.56□□□□□ -0.4
TCF12-226ENST00000561449 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
TCF12-226ENST00000561449 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
TCF12-226ENST00000561449 POTEHQ6S545 545 aa12.54□□□□□ -0.4
TCF12-226ENST00000561449 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
TCF12-226ENST00000561449 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
TCF12-226ENST00000561449 VPS8Q8N3P4 1428 aa12.52□□□□□ -0.41
TCF12-226ENST00000561449 MAP3K4Q9Y6R4 1608 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms