RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 LAMC3Q9Y6N6 1575 aa21.6■■□□□ 1.05
CRTC3-210ENST00000560927 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
CRTC3-210ENST00000560927 LRRC9Q6ZRR7 1453 aa21.58■■□□□ 1.05
CRTC3-210ENST00000560927 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
CRTC3-210ENST00000560927 PCF11O94913 1555 aaKnown RBP21.57■■□□□ 1.04
CRTC3-210ENST00000560927 FHOD3Q2V2M9 1422 aa21.56■■□□□ 1.04
CRTC3-210ENST00000560927 CUL7Q14999 1698 aa21.55■■□□□ 1.04
CRTC3-210ENST00000560927 PHLDB1Q86UU1 1377 aa21.53■■□□□ 1.04
CRTC3-210ENST00000560927 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
CRTC3-210ENST00000560927 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
CRTC3-210ENST00000560927 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
CRTC3-210ENST00000560927 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
CRTC3-210ENST00000560927 MIER1Q8N108 512 aa21.49■■□□□ 1.03
CRTC3-210ENST00000560927 EFCAB5A4FU69 1503 aa21.48■■□□□ 1.03
CRTC3-210ENST00000560927 CTTNBP2Q8WZ74 1663 aa21.48■■□□□ 1.03
CRTC3-210ENST00000560927 CENPBP07199 599 aaPredicted RBP21.48■■□□□ 1.03
CRTC3-210ENST00000560927 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
CRTC3-210ENST00000560927 RAB3GAP2Q9H2M9 1393 aa21.46■■□□□ 1.03
CRTC3-210ENST00000560927 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.03
CRTC3-210ENST00000560927 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
CRTC3-210ENST00000560927 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
CRTC3-210ENST00000560927 GAPVD1Q14C86 1478 aa21.42■■□□□ 1.02
CRTC3-210ENST00000560927 KIF21AQ7Z4S6 1674 aa21.42■■□□□ 1.02
CRTC3-210ENST00000560927 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
CRTC3-210ENST00000560927 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
CRTC3-210ENST00000560927 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
CRTC3-210ENST00000560927 SETD5Q9C0A6 1442 aa21.37■■□□□ 1.01
CRTC3-210ENST00000560927 MAPKBP1O60336 1514 aa21.36■■□□□ 1.01
CRTC3-210ENST00000560927 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
CRTC3-210ENST00000560927 GTF3C3Q9Y5Q9 886 aa21.35■■□□□ 1.01
CRTC3-210ENST00000560927 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
CRTC3-210ENST00000560927 SAMD9Q5K651 1589 aa21.32■■□□□ 1
CRTC3-210ENST00000560927 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
CRTC3-210ENST00000560927 LRRIQ1Q96JM4 1722 aa21.25■□□□□ 0.99
CRTC3-210ENST00000560927 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
CRTC3-210ENST00000560927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
CRTC3-210ENST00000560927 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
CRTC3-210ENST00000560927 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
CRTC3-210ENST00000560927 SIN3AQ96ST3 1273 aa21.2■□□□□ 0.98
CRTC3-210ENST00000560927 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
CRTC3-210ENST00000560927 NCOA2Q15596 1464 aa21.16■□□□□ 0.98
CRTC3-210ENST00000560927 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
CRTC3-210ENST00000560927 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
CRTC3-210ENST00000560927 PTPRKQ15262 1439 aa21.14■□□□□ 0.98
CRTC3-210ENST00000560927 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
CRTC3-210ENST00000560927 MYOM3Q5VTT5 1437 aa21.11■□□□□ 0.97
CRTC3-210ENST00000560927 MAGI3Q5TCQ9 1506 aa21.11■□□□□ 0.97
CRTC3-210ENST00000560927 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
CRTC3-210ENST00000560927 EHBP1L1Q8N3D4 1523 aa21.1■□□□□ 0.97
CRTC3-210ENST00000560927 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
CRTC3-210ENST00000560927 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
CRTC3-210ENST00000560927 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
CRTC3-210ENST00000560927 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
CRTC3-210ENST00000560927 UGGT2Q9NYU1 1516 aa21.05■□□□□ 0.96
CRTC3-210ENST00000560927 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
CRTC3-210ENST00000560927 PTPN23Q9H3S7 1636 aa21.03■□□□□ 0.96
CRTC3-210ENST00000560927 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
CRTC3-210ENST00000560927 NAIPQ13075 1403 aa21.01■□□□□ 0.95
CRTC3-210ENST00000560927 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
CRTC3-210ENST00000560927 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
CRTC3-210ENST00000560927 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
CRTC3-210ENST00000560927 WDR62O43379 1518 aa20.99■□□□□ 0.95
CRTC3-210ENST00000560927 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
CRTC3-210ENST00000560927 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
CRTC3-210ENST00000560927 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
CRTC3-210ENST00000560927 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
CRTC3-210ENST00000560927 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
CRTC3-210ENST00000560927 TCOF1Q13428 1488 aaKnown RBP20.93■□□□□ 0.94
CRTC3-210ENST00000560927 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
CRTC3-210ENST00000560927 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
CRTC3-210ENST00000560927 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
CRTC3-210ENST00000560927 DISP1Q96F81 1524 aa20.9■□□□□ 0.94
CRTC3-210ENST00000560927 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
CRTC3-210ENST00000560927 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
CRTC3-210ENST00000560927 TONSLQ96HA7 1378 aa20.9■□□□□ 0.94
CRTC3-210ENST00000560927 KCNH8Q96L42 1107 aa20.89■□□□□ 0.93
CRTC3-210ENST00000560927 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
CRTC3-210ENST00000560927 KIAA0556O60303 1618 aa20.88■□□□□ 0.93
CRTC3-210ENST00000560927 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
CRTC3-210ENST00000560927 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
CRTC3-210ENST00000560927 KDM6BO15054 1643 aa20.83■□□□□ 0.93
CRTC3-210ENST00000560927 ERCC6Q03468 1493 aa20.83■□□□□ 0.93
CRTC3-210ENST00000560927 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.93
CRTC3-210ENST00000560927 NUP153P49790 1475 aaKnown RBP20.82■□□□□ 0.92
CRTC3-210ENST00000560927 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
CRTC3-210ENST00000560927 AKNAQ7Z591 1439 aa20.8■□□□□ 0.92
CRTC3-210ENST00000560927 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
CRTC3-210ENST00000560927 TRIM52Q96A61 297 aa20.78■□□□□ 0.92
CRTC3-210ENST00000560927 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
CRTC3-210ENST00000560927 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
CRTC3-210ENST00000560927 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
CRTC3-210ENST00000560927 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
CRTC3-210ENST00000560927 ZNF644Q9H582 1327 aaPredicted RBP20.75■□□□□ 0.91
CRTC3-210ENST00000560927 DAPK1P53355 1430 aa20.73■□□□□ 0.91
CRTC3-210ENST00000560927 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
CRTC3-210ENST00000560927 FBLN2P98095 1184 aa20.72■□□□□ 0.91
CRTC3-210ENST00000560927 MPHOSPH9Q99550 1183 aa20.71■□□□□ 0.91
CRTC3-210ENST00000560927 PLB1Q6P1J6 1458 aa20.7■□□□□ 0.9
CRTC3-210ENST00000560927 ABCC5O15440 1437 aa20.7■□□□□ 0.9
CRTC3-210ENST00000560927 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms