RNA–Protein interactions for RNA: ENST00000560887.1

TCF12-220, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-220ENST00000560887 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
TCF12-220ENST00000560887 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
TCF12-220ENST00000560887 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
TCF12-220ENST00000560887 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
TCF12-220ENST00000560887 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
TCF12-220ENST00000560887 ABCB7O75027 752 aa11.3□□□□□ -0.6
TCF12-220ENST00000560887 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
TCF12-220ENST00000560887 SOGA1O94964 1423 aa11.26□□□□□ -0.61
TCF12-220ENST00000560887 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
TCF12-220ENST00000560887 CUL7Q14999 1698 aa11.22□□□□□ -0.61
TCF12-220ENST00000560887 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.61
TCF12-220ENST00000560887 ZNF608Q9ULD9 1512 aaPredicted RBP11.21□□□□□ -0.61
TCF12-220ENST00000560887 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
TCF12-220ENST00000560887 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
TCF12-220ENST00000560887 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
TCF12-220ENST00000560887 KIF27Q86VH2 1401 aa11.19□□□□□ -0.62
TCF12-220ENST00000560887 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
TCF12-220ENST00000560887 POLA2Q14181 598 aa11.18□□□□□ -0.62
TCF12-220ENST00000560887 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
TCF12-220ENST00000560887 MAGI1Q96QZ7 1491 aaPredicted RBP11.18□□□□□ -0.62
TCF12-220ENST00000560887 EEA1Q15075 1411 aa11.18□□□□□ -0.62
TCF12-220ENST00000560887 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
TCF12-220ENST00000560887 CHD1O14646 1710 aa11.15□□□□□ -0.63
TCF12-220ENST00000560887 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.63
TCF12-220ENST00000560887 SNAPC4Q5SXM2 1469 aa11.14□□□□□ -0.63
TCF12-220ENST00000560887 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
TCF12-220ENST00000560887 KIF21BO75037 1637 aa11.1□□□□□ -0.63
TCF12-220ENST00000560887 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
TCF12-220ENST00000560887 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
TCF12-220ENST00000560887 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
TCF12-220ENST00000560887 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
TCF12-220ENST00000560887 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
TCF12-220ENST00000560887 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
TCF12-220ENST00000560887 PRXQ9BXM0 1461 aa11.04□□□□□ -0.64
TCF12-220ENST00000560887 IGF1RP08069 1367 aa11.03□□□□□ -0.64
TCF12-220ENST00000560887 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
TCF12-220ENST00000560887 CEP170Q5SW79 1584 aa11□□□□□ -0.65
TCF12-220ENST00000560887 CARMIL1Q5VZK9 1371 aa11□□□□□ -0.65
TCF12-220ENST00000560887 CLASP1Q7Z460 1538 aa10.99□□□□□ -0.65
TCF12-220ENST00000560887 NUP160Q12769 1436 aa10.99□□□□□ -0.65
TCF12-220ENST00000560887 GOLGA3Q08378 1498 aa10.99□□□□□ -0.65
TCF12-220ENST00000560887 IQGAP2Q13576 1575 aa10.96□□□□□ -0.65
TCF12-220ENST00000560887 SHROOM2Q13796 1616 aa10.95□□□□□ -0.66
TCF12-220ENST00000560887 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
TCF12-220ENST00000560887 CHMP7Q8WUX9 453 aaPredicted RBP10.93□□□□□ -0.66
TCF12-220ENST00000560887 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
TCF12-220ENST00000560887 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
TCF12-220ENST00000560887 KIAA0586Q9BVV6 1533 aa10.91□□□□□ -0.66
TCF12-220ENST00000560887 FBLN2P98095 1184 aa10.89□□□□□ -0.67
TCF12-220ENST00000560887 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
TCF12-220ENST00000560887 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
TCF12-220ENST00000560887 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
TCF12-220ENST00000560887 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
TCF12-220ENST00000560887 KIAA0556O60303 1618 aa10.86□□□□□ -0.67
TCF12-220ENST00000560887 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
TCF12-220ENST00000560887 RIMBP3CA6NJZ7 1639 aa10.81□□□□□ -0.68
TCF12-220ENST00000560887 RIMBP3BA6NNM3 1639 aa10.81□□□□□ -0.68
TCF12-220ENST00000560887 RIMBP3Q9UFD9 1639 aa10.81□□□□□ -0.68
TCF12-220ENST00000560887 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
TCF12-220ENST00000560887 ARHGEF11O15085 1522 aa10.81□□□□□ -0.68
TCF12-220ENST00000560887 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
TCF12-220ENST00000560887 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
TCF12-220ENST00000560887 CARMIL2Q6F5E8 1435 aa10.79□□□□□ -0.68
TCF12-220ENST00000560887 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
TCF12-220ENST00000560887 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.68
TCF12-220ENST00000560887 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
TCF12-220ENST00000560887 UBTFP17480 764 aaKnown RBP10.76□□□□□ -0.69
TCF12-220ENST00000560887 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
TCF12-220ENST00000560887 CLIP1P30622 1438 aa10.74□□□□□ -0.69
TCF12-220ENST00000560887 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
TCF12-220ENST00000560887 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
TCF12-220ENST00000560887 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
TCF12-220ENST00000560887 POTEHQ6S545 545 aa10.71□□□□□ -0.69
TCF12-220ENST00000560887 RAPGEF6Q8TEU7 1601 aa10.71□□□□□ -0.69
TCF12-220ENST00000560887 HECW1Q76N89 1606 aa10.7□□□□□ -0.7
TCF12-220ENST00000560887 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
TCF12-220ENST00000560887 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
TCF12-220ENST00000560887 ABCA8O94911 1581 aa10.69□□□□□ -0.7
TCF12-220ENST00000560887 FMN1Q68DA7 1419 aa10.69□□□□□ -0.7
TCF12-220ENST00000560887 LOC105371045A0A1W2PR82 267 aa10.69□□□□□ -0.7
TCF12-220ENST00000560887 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
TCF12-220ENST00000560887 ABCC2Q92887 1545 aa10.68□□□□□ -0.7
TCF12-220ENST00000560887 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
TCF12-220ENST00000560887 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
TCF12-220ENST00000560887 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
TCF12-220ENST00000560887 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
TCF12-220ENST00000560887 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
TCF12-220ENST00000560887 REM2Q8IYK8 340 aaPredicted RBP10.66□□□□□ -0.7
TCF12-220ENST00000560887 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
TCF12-220ENST00000560887 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
TCF12-220ENST00000560887 PTPRGP23470 1445 aa10.65□□□□□ -0.7
TCF12-220ENST00000560887 LRRIQ1Q96JM4 1722 aa10.64□□□□□ -0.71
TCF12-220ENST00000560887 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
TCF12-220ENST00000560887 TRIM26Q12899 539 aaPredicted RBP10.63□□□□□ -0.71
TCF12-220ENST00000560887 CHRDL2Q6WN34 429 aa10.63□□□□□ -0.71
TCF12-220ENST00000560887 VPS8Q8N3P4 1428 aa10.63□□□□□ -0.71
TCF12-220ENST00000560887 UACAQ9BZF9 1416 aa10.63□□□□□ -0.71
TCF12-220ENST00000560887 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
TCF12-220ENST00000560887 PLB1Q6P1J6 1458 aa10.62□□□□□ -0.71
TCF12-220ENST00000560887 HRCP23327 699 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms