RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
PBX1-219ENST00000560641 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
PBX1-219ENST00000560641 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
PBX1-219ENST00000560641 CFAP43Q8NDM7 1665 aa22.56■■□□□ 1.2
PBX1-219ENST00000560641 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.19
PBX1-219ENST00000560641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
PBX1-219ENST00000560641 ANP32CO43423 234 aa22.49■■□□□ 1.19
PBX1-219ENST00000560641 CDK11AQ9UQ88 783 aaPredicted RBP22.46■■□□□ 1.19
PBX1-219ENST00000560641 LRRC9Q6ZRR7 1453 aa22.46■■□□□ 1.19
PBX1-219ENST00000560641 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
PBX1-219ENST00000560641 PRKCSHP14314 528 aaPredicted RBP22.41■■□□□ 1.18
PBX1-219ENST00000560641 ITGAEP38570 1179 aa22.41■■□□□ 1.18
PBX1-219ENST00000560641 CUX1P39880 1505 aa22.39■■□□□ 1.18
PBX1-219ENST00000560641 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
PBX1-219ENST00000560641 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
PBX1-219ENST00000560641 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
PBX1-219ENST00000560641 KDM5BQ9UGL1 1544 aa22.32■■□□□ 1.16
PBX1-219ENST00000560641 PHLDB1Q86UU1 1377 aa22.32■■□□□ 1.16
PBX1-219ENST00000560641 PPP4R2Q9NY27 417 aa22.32■■□□□ 1.16
PBX1-219ENST00000560641 DEKP35659 375 aaKnown RBP22.3■■□□□ 1.16
PBX1-219ENST00000560641 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
PBX1-219ENST00000560641 NCOA2Q15596 1464 aa22.29■■□□□ 1.16
PBX1-219ENST00000560641 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
PBX1-219ENST00000560641 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
PBX1-219ENST00000560641 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
PBX1-219ENST00000560641 PCF11O94913 1555 aaKnown RBP22.22■■□□□ 1.15
PBX1-219ENST00000560641 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
PBX1-219ENST00000560641 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
PBX1-219ENST00000560641 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
PBX1-219ENST00000560641 FYCO1Q9BQS8 1478 aa22.18■■□□□ 1.14
PBX1-219ENST00000560641 POLR1AO95602 1720 aaPredicted RBP22.18■■□□□ 1.14
PBX1-219ENST00000560641 PTPN23Q9H3S7 1636 aa22.17■■□□□ 1.14
PBX1-219ENST00000560641 HFM1A2PYH4 1435 aa22.16■■□□□ 1.14
PBX1-219ENST00000560641 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
PBX1-219ENST00000560641 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
PBX1-219ENST00000560641 TONSLQ96HA7 1378 aa22.14■■□□□ 1.14
PBX1-219ENST00000560641 HNRNPUQ00839 825 aaKnown RBP eCLIP22.14■■□□□ 1.13
PBX1-219ENST00000560641 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
PBX1-219ENST00000560641 CCDC18Q5T9S5 1454 aa22.13■■□□□ 1.13
PBX1-219ENST00000560641 CFTRP13569 1480 aa22.11■■□□□ 1.13
PBX1-219ENST00000560641 CNTLNQ9NXG0 1405 aa22.1■■□□□ 1.13
PBX1-219ENST00000560641 ZBED9Q6R2W3 1325 aa22.1■■□□□ 1.13
PBX1-219ENST00000560641 IGF1RP08069 1367 aa22.09■■□□□ 1.13
PBX1-219ENST00000560641 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
PBX1-219ENST00000560641 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
PBX1-219ENST00000560641 CASKIN1Q8WXD9 1431 aa22.07■■□□□ 1.12
PBX1-219ENST00000560641 FGD6Q6ZV73 1430 aa22.04■■□□□ 1.12
PBX1-219ENST00000560641 RNF123Q5XPI4 1314 aa22.03■■□□□ 1.12
PBX1-219ENST00000560641 GCC2Q8IWJ2 1684 aa22.03■■□□□ 1.12
PBX1-219ENST00000560641 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
PBX1-219ENST00000560641 WASHC2AQ641Q2 1341 aa22■■□□□ 1.11
PBX1-219ENST00000560641 SMG6Q86US8 1419 aaKnown RBP21.99■■□□□ 1.11
PBX1-219ENST00000560641 NCOA1Q15788 1441 aa21.99■■□□□ 1.11
PBX1-219ENST00000560641 IRX6P78412 446 aaPredicted RBP21.98■■□□□ 1.11
PBX1-219ENST00000560641 NAIPQ13075 1403 aa21.97■■□□□ 1.11
PBX1-219ENST00000560641 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
PBX1-219ENST00000560641 IPO9Q96P70 1041 aaKnown RBP21.96■■□□□ 1.11
PBX1-219ENST00000560641 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
PBX1-219ENST00000560641 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
PBX1-219ENST00000560641 AKNAQ7Z591 1439 aa21.94■■□□□ 1.1
PBX1-219ENST00000560641 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
PBX1-219ENST00000560641 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
PBX1-219ENST00000560641 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
PBX1-219ENST00000560641 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
PBX1-219ENST00000560641 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
PBX1-219ENST00000560641 B4GALNT3Q6L9W6 998 aa21.89■■□□□ 1.1
PBX1-219ENST00000560641 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.1
PBX1-219ENST00000560641 PRKRIP1Q9H875 184 aaPredicted RBP21.89■■□□□ 1.09
PBX1-219ENST00000560641 PABPN1Q86U42 306 aaKnown RBP eCLIP21.89■■□□□ 1.09
PBX1-219ENST00000560641 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
PBX1-219ENST00000560641 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
PBX1-219ENST00000560641 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
PBX1-219ENST00000560641 CCDC7Q96M83 1385 aa21.86■■□□□ 1.09
PBX1-219ENST00000560641 HSPA5P11021 654 aaKnown RBP21.86■■□□□ 1.09
PBX1-219ENST00000560641 USP35Q9P2H5 1018 aa21.86■■□□□ 1.09
PBX1-219ENST00000560641 C11orf95C9JLR9 678 aaPredicted RBP21.85■■□□□ 1.09
PBX1-219ENST00000560641 ANP32AP39687 249 aaKnown RBP21.85■■□□□ 1.09
PBX1-219ENST00000560641 CUL7Q14999 1698 aa21.85■■□□□ 1.09
PBX1-219ENST00000560641 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
PBX1-219ENST00000560641 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
PBX1-219ENST00000560641 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
PBX1-219ENST00000560641 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
PBX1-219ENST00000560641 MYOM3Q5VTT5 1437 aa21.83■■□□□ 1.08
PBX1-219ENST00000560641 EIF4G2P78344 907 aaKnown RBP eCLIP21.81■■□□□ 1.08
PBX1-219ENST00000560641 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
PBX1-219ENST00000560641 SPATA31E1Q6ZUB1 1445 aa21.81■■□□□ 1.08
PBX1-219ENST00000560641 SAMD9Q5K651 1589 aa21.81■■□□□ 1.08
PBX1-219ENST00000560641 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
PBX1-219ENST00000560641 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
PBX1-219ENST00000560641 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
PBX1-219ENST00000560641 NBR1Q14596 966 aa21.8■■□□□ 1.08
PBX1-219ENST00000560641 ZBTB47Q9UFB7 747 aaPredicted RBP21.78■■□□□ 1.08
PBX1-219ENST00000560641 UGGT2Q9NYU1 1516 aa21.78■■□□□ 1.08
PBX1-219ENST00000560641 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.07
PBX1-219ENST00000560641 NUDCQ9Y266 331 aa21.75■■□□□ 1.07
PBX1-219ENST00000560641 GRIN2BQ13224 1484 aa21.73■■□□□ 1.07
PBX1-219ENST00000560641 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
PBX1-219ENST00000560641 TEX14Q8IWB6 1497 aa21.72■■□□□ 1.07
PBX1-219ENST00000560641 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
PBX1-219ENST00000560641 MIA2Q96PC5 1412 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms