RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 CARMIL1Q5VZK9 1371 aa36.89■■■■□ 3.5
SHF-207ENST00000560540 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
SHF-207ENST00000560540 NEUROD1Q13562 356 aa36.89■■■■□ 3.5
SHF-207ENST00000560540 CENPBP07199 599 aaPredicted RBP36.88■■■■□ 3.49
SHF-207ENST00000560540 PBRM1Q86U86 1689 aa36.87■■■■□ 3.49
SHF-207ENST00000560540 GRIN2BQ13224 1484 aa36.83■■■■□ 3.49
SHF-207ENST00000560540 ZNF316A6NFI3 1004 aaPredicted RBP36.82■■■■□ 3.48
SHF-207ENST00000560540 CUL7Q14999 1698 aa36.78■■■■□ 3.48
SHF-207ENST00000560540 SNAPC4Q5SXM2 1469 aa36.69■■■■□ 3.46
SHF-207ENST00000560540 ADAMTS12P58397 1594 aa36.65■■■■□ 3.46
SHF-207ENST00000560540 FHAD1B1AJZ9 1412 aa36.63■■■■□ 3.45
SHF-207ENST00000560540 APLP2Q06481 763 aa36.6■■■■□ 3.45
SHF-207ENST00000560540 HNRNPUL2Q1KMD3 747 aaKnown RBP36.58■■■■□ 3.45
SHF-207ENST00000560540 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
SHF-207ENST00000560540 GTF3C3Q9Y5Q9 886 aa36.55■■■■□ 3.44
SHF-207ENST00000560540 RANGAP1P46060 587 aaPredicted RBP36.47■■■■□ 3.43
SHF-207ENST00000560540 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
SHF-207ENST00000560540 ARAP1Q96P48 1450 aa36.44■■■■□ 3.42
SHF-207ENST00000560540 FBLN2P98095 1184 aa36.43■■■■□ 3.42
SHF-207ENST00000560540 CHMP7Q8WUX9 453 aaPredicted RBP36.41■■■■□ 3.42
SHF-207ENST00000560540 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
SHF-207ENST00000560540 CLSPNQ9HAW4 1339 aa36.38■■■■□ 3.41
SHF-207ENST00000560540 CTTNBP2Q8WZ74 1663 aa36.32■■■■□ 3.4
SHF-207ENST00000560540 CHD1O14646 1710 aa36.22■■■■□ 3.39
SHF-207ENST00000560540 CEP170Q5SW79 1584 aa36.21■■■■□ 3.39
SHF-207ENST00000560540 MIER1Q8N108 512 aa36.2■■■■□ 3.39
SHF-207ENST00000560540 RRBP1Q9P2E9 1410 aaKnown RBP36.2■■■■□ 3.39
SHF-207ENST00000560540 DHX57Q6P158 1386 aaKnown RBP36.19■■■■□ 3.38
SHF-207ENST00000560540 NUP160Q12769 1436 aa36.15■■■■□ 3.38
SHF-207ENST00000560540 ARHGAP35Q9NRY4 1499 aa36.14■■■■□ 3.38
SHF-207ENST00000560540 IQGAP2Q13576 1575 aa36.13■■■■□ 3.37
SHF-207ENST00000560540 KIAA0586Q9BVV6 1533 aa36.12■■■■□ 3.37
SHF-207ENST00000560540 YTHDC1Q96MU7 727 aaKnown RBP36.06■■■■□ 3.36
SHF-207ENST00000560540 P3H3Q8IVL6 736 aa36.05■■■■□ 3.36
SHF-207ENST00000560540 KANK4Q5T7N3 995 aaPredicted RBP36.04■■■■□ 3.36
SHF-207ENST00000560540 EFCAB5A4FU69 1503 aa35.95■■■■□ 3.35
SHF-207ENST00000560540 SAMD9Q5K651 1589 aa35.94■■■■□ 3.34
SHF-207ENST00000560540 FHOD3Q2V2M9 1422 aa35.94■■■■□ 3.34
SHF-207ENST00000560540 UGGT2Q9NYU1 1516 aa35.93■■■■□ 3.34
SHF-207ENST00000560540 MAP3K1Q13233 1512 aa35.92■■■■□ 3.34
SHF-207ENST00000560540 CCNB3Q8WWL7 1395 aa35.91■■■■□ 3.34
SHF-207ENST00000560540 JPH4Q96JJ6 628 aa35.89■■■■□ 3.34
SHF-207ENST00000560540 DISP1Q96F81 1524 aa35.84■■■■□ 3.33
SHF-207ENST00000560540 TIAM1Q13009 1591 aa35.83■■■■□ 3.33
SHF-207ENST00000560540 CLASP1Q7Z460 1538 aa35.79■■■■□ 3.32
SHF-207ENST00000560540 KIAA0556O60303 1618 aa35.77■■■■□ 3.32
SHF-207ENST00000560540 PRG4Q92954 1404 aaPredicted RBP35.7■■■■□ 3.31
SHF-207ENST00000560540 SHROOM2Q13796 1616 aa35.7■■■■□ 3.31
SHF-207ENST00000560540 OSCARQ8IYS5 282 aa35.69■■■■□ 3.3
SHF-207ENST00000560540 CFAP43Q8NDM7 1665 aa35.67■■■■□ 3.3
SHF-207ENST00000560540 CARMIL2Q6F5E8 1435 aa35.66■■■■□ 3.3
SHF-207ENST00000560540 FMN1Q68DA7 1419 aa35.65■■■■□ 3.3
SHF-207ENST00000560540 PCF11O94913 1555 aaKnown RBP35.63■■■■□ 3.29
SHF-207ENST00000560540 LRRC9Q6ZRR7 1453 aa35.61■■■■□ 3.29
SHF-207ENST00000560540 MAPKBP1O60336 1514 aa35.61■■■■□ 3.29
SHF-207ENST00000560540 ERCC6L2Q5T890 1561 aa35.61■■■■□ 3.29
SHF-207ENST00000560540 MYT1Q01538 1121 aa35.59■■■■□ 3.29
SHF-207ENST00000560540 RAB3GAP2Q9H2M9 1393 aa35.59■■■■□ 3.29
SHF-207ENST00000560540 ATP1B4Q9UN42 357 aaPredicted RBP35.56■■■■□ 3.28
SHF-207ENST00000560540 CASKIN1Q8WXD9 1431 aa35.54■■■■□ 3.28
SHF-207ENST00000560540 FYCO1Q9BQS8 1478 aa35.51■■■■□ 3.27
SHF-207ENST00000560540 SETD5Q9C0A6 1442 aa35.49■■■■□ 3.27
SHF-207ENST00000560540 PHLDB1Q86UU1 1377 aa35.42■■■■□ 3.26
SHF-207ENST00000560540 PLB1Q6P1J6 1458 aa35.42■■■■□ 3.26
SHF-207ENST00000560540 PTPRGP23470 1445 aa35.41■■■■□ 3.26
SHF-207ENST00000560540 ITGAEP38570 1179 aa35.41■■■■□ 3.26
SHF-207ENST00000560540 LRRIQ1Q96JM4 1722 aa35.39■■■■□ 3.26
SHF-207ENST00000560540 ARID3CA6NKF2 412 aa35.36■■■■□ 3.25
SHF-207ENST00000560540 RAPGEF6Q8TEU7 1601 aa35.35■■■■□ 3.25
SHF-207ENST00000560540 HECW1Q76N89 1606 aa35.33■■■■□ 3.25
SHF-207ENST00000560540 NUP153P49790 1475 aaKnown RBP35.31■■■■□ 3.24
SHF-207ENST00000560540 ABCA8O94911 1581 aa35.29■■■■□ 3.24
SHF-207ENST00000560540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.29■■■■□ 3.24
SHF-207ENST00000560540 EPRSP07814 1512 aaKnown RBP35.27■■■■□ 3.24
SHF-207ENST00000560540 CDK13Q14004 1512 aaKnown RBP35.26■■■■□ 3.23
SHF-207ENST00000560540 SUPT16HQ9Y5B9 1047 aaKnown RBP35.23■■■■□ 3.23
SHF-207ENST00000560540 TIMELESSQ9UNS1 1208 aa35.22■■■■□ 3.23
SHF-207ENST00000560540 CCDC18Q5T9S5 1454 aa35.19■■■■□ 3.22
SHF-207ENST00000560540 UACAQ9BZF9 1416 aa35.19■■■■□ 3.22
SHF-207ENST00000560540 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
SHF-207ENST00000560540 FAM50AQ14320 339 aaKnown RBP35.15■■■■□ 3.22
SHF-207ENST00000560540 ARHGEF11O15085 1522 aa35.13■■■■□ 3.21
SHF-207ENST00000560540 MAGI3Q5TCQ9 1506 aa35.12■■■■□ 3.21
SHF-207ENST00000560540 ABCC2Q92887 1545 aa35.08■■■■□ 3.21
SHF-207ENST00000560540 MTUS2Q5JR59 1369 aa35.08■■■■□ 3.21
SHF-207ENST00000560540 ATP10BO94823 1461 aa35.08■■■■□ 3.21
SHF-207ENST00000560540 SIN3AQ96ST3 1273 aa35.02■■■■□ 3.2
SHF-207ENST00000560540 FGD6Q6ZV73 1430 aa35.02■■■■□ 3.2
SHF-207ENST00000560540 UHRF1BP1LA0JNW5 1464 aa34.99■■■■□ 3.19
SHF-207ENST00000560540 RIMBP3CA6NJZ7 1639 aa34.99■■■■□ 3.19
SHF-207ENST00000560540 RIMBP3BA6NNM3 1639 aa34.99■■■■□ 3.19
SHF-207ENST00000560540 RIMBP3Q9UFD9 1639 aa34.99■■■■□ 3.19
SHF-207ENST00000560540 EHBP1L1Q8N3D4 1523 aa34.98■■■■□ 3.19
SHF-207ENST00000560540 ADCY10Q96PN6 1610 aa34.97■■■■□ 3.19
SHF-207ENST00000560540 CDK11AQ9UQ88 783 aaPredicted RBP34.93■■■■□ 3.18
SHF-207ENST00000560540 PPP1R15AO75807 674 aaPredicted RBP34.91■■■■□ 3.18
SHF-207ENST00000560540 KCNH8Q96L42 1107 aa34.9■■■■□ 3.18
SHF-207ENST00000560540 PTPN23Q9H3S7 1636 aa34.89■■■■□ 3.18
SHF-207ENST00000560540 HFM1A2PYH4 1435 aa34.89■■■■□ 3.18
SHF-207ENST00000560540 KDM5BQ9UGL1 1544 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms