RNA–Protein interactions for RNA: ENST00000560335.5

NUMB-232, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-232ENST00000560335 PBRM1Q86U86 1689 aa10.8□□□□□ -0.68
NUMB-232ENST00000560335 IGF1RP08069 1367 aa10.77□□□□□ -0.69
NUMB-232ENST00000560335 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
NUMB-232ENST00000560335 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
NUMB-232ENST00000560335 CHD1O14646 1710 aa10.74□□□□□ -0.69
NUMB-232ENST00000560335 ARAP1Q96P48 1450 aa10.71□□□□□ -0.69
NUMB-232ENST00000560335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.71□□□□□ -0.69
NUMB-232ENST00000560335 FBLN2P98095 1184 aa10.71□□□□□ -0.69
NUMB-232ENST00000560335 MAP3K1Q13233 1512 aa10.71□□□□□ -0.7
NUMB-232ENST00000560335 MAGI1Q96QZ7 1491 aaPredicted RBP10.71□□□□□ -0.7
NUMB-232ENST00000560335 CARMIL1Q5VZK9 1371 aa10.7□□□□□ -0.7
NUMB-232ENST00000560335 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
NUMB-232ENST00000560335 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
NUMB-232ENST00000560335 SYNJ2O15056 1496 aa10.68□□□□□ -0.7
NUMB-232ENST00000560335 CUL7Q14999 1698 aa10.67□□□□□ -0.7
NUMB-232ENST00000560335 CHMP7Q8WUX9 453 aaPredicted RBP10.67□□□□□ -0.7
NUMB-232ENST00000560335 ARHGAP35Q9NRY4 1499 aa10.66□□□□□ -0.7
NUMB-232ENST00000560335 FHAD1B1AJZ9 1412 aa10.65□□□□□ -0.7
NUMB-232ENST00000560335 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
NUMB-232ENST00000560335 RRBP1Q9P2E9 1410 aaKnown RBP10.65□□□□□ -0.7
NUMB-232ENST00000560335 GRIN2AQ12879 1464 aa10.64□□□□□ -0.71
NUMB-232ENST00000560335 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
NUMB-232ENST00000560335 CEP170Q5SW79 1584 aa10.62□□□□□ -0.71
NUMB-232ENST00000560335 TTBK1Q5TCY1 1321 aaPredicted RBP10.61□□□□□ -0.71
NUMB-232ENST00000560335 CLASP1Q7Z460 1538 aa10.59□□□□□ -0.71
NUMB-232ENST00000560335 RANGAP1P46060 587 aaPredicted RBP10.58□□□□□ -0.72
NUMB-232ENST00000560335 NUP160Q12769 1436 aa10.57□□□□□ -0.72
NUMB-232ENST00000560335 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
NUMB-232ENST00000560335 CCNB3Q8WWL7 1395 aa10.57□□□□□ -0.72
NUMB-232ENST00000560335 CTTNBP2Q8WZ74 1663 aa10.56□□□□□ -0.72
NUMB-232ENST00000560335 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
NUMB-232ENST00000560335 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
NUMB-232ENST00000560335 FOXD1Q16676 465 aa10.54□□□□□ -0.72
NUMB-232ENST00000560335 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
NUMB-232ENST00000560335 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
NUMB-232ENST00000560335 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
NUMB-232ENST00000560335 CFAP43Q8NDM7 1665 aa10.53□□□□□ -0.72
NUMB-232ENST00000560335 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.72
NUMB-232ENST00000560335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.72
NUMB-232ENST00000560335 CASKIN1Q8WXD9 1431 aa10.52□□□□□ -0.73
NUMB-232ENST00000560335 KANK4Q5T7N3 995 aaPredicted RBP10.52□□□□□ -0.73
NUMB-232ENST00000560335 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
NUMB-232ENST00000560335 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
NUMB-232ENST00000560335 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
NUMB-232ENST00000560335 ERCC6L2Q5T890 1561 aa10.51□□□□□ -0.73
NUMB-232ENST00000560335 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
NUMB-232ENST00000560335 ARHGEF11O15085 1522 aa10.5□□□□□ -0.73
NUMB-232ENST00000560335 KIAA0586Q9BVV6 1533 aa10.5□□□□□ -0.73
NUMB-232ENST00000560335 IQGAP2Q13576 1575 aa10.49□□□□□ -0.73
NUMB-232ENST00000560335 DHX57Q6P158 1386 aaKnown RBP10.49□□□□□ -0.73
NUMB-232ENST00000560335 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
NUMB-232ENST00000560335 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
NUMB-232ENST00000560335 PCF11O94913 1555 aaKnown RBP10.47□□□□□ -0.73
NUMB-232ENST00000560335 CENPBP07199 599 aaPredicted RBP10.46□□□□□ -0.74
NUMB-232ENST00000560335 SAMD9Q5K651 1589 aa10.46□□□□□ -0.74
NUMB-232ENST00000560335 PRG4Q92954 1404 aaPredicted RBP10.46□□□□□ -0.74
NUMB-232ENST00000560335 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
NUMB-232ENST00000560335 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
NUMB-232ENST00000560335 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
NUMB-232ENST00000560335 CYB5RLQ6IPT4 315 aa10.42□□□□□ -0.74
NUMB-232ENST00000560335 SETD5Q9C0A6 1442 aa10.42□□□□□ -0.74
NUMB-232ENST00000560335 TIMELESSQ9UNS1 1208 aa10.41□□□□□ -0.74
NUMB-232ENST00000560335 CCDC18Q5T9S5 1454 aa10.41□□□□□ -0.74
NUMB-232ENST00000560335 KIAA0556O60303 1618 aa10.4□□□□□ -0.74
NUMB-232ENST00000560335 PHLDB1Q86UU1 1377 aa10.4□□□□□ -0.75
NUMB-232ENST00000560335 RAB3GAP2Q9H2M9 1393 aa10.38□□□□□ -0.75
NUMB-232ENST00000560335 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
NUMB-232ENST00000560335 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
NUMB-232ENST00000560335 MTUS2Q5JR59 1369 aa10.36□□□□□ -0.75
NUMB-232ENST00000560335 CARMIL2Q6F5E8 1435 aa10.36□□□□□ -0.75
NUMB-232ENST00000560335 FGD6Q6ZV73 1430 aa10.35□□□□□ -0.75
NUMB-232ENST00000560335 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
NUMB-232ENST00000560335 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
NUMB-232ENST00000560335 LRRIQ1Q96JM4 1722 aa10.33□□□□□ -0.76
NUMB-232ENST00000560335 PTPRGP23470 1445 aa10.33□□□□□ -0.76
NUMB-232ENST00000560335 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
NUMB-232ENST00000560335 MAPKBP1O60336 1514 aa10.31□□□□□ -0.76
NUMB-232ENST00000560335 FAM50AQ14320 339 aaKnown RBP10.31□□□□□ -0.76
NUMB-232ENST00000560335 ADCY10Q96PN6 1610 aa10.31□□□□□ -0.76
NUMB-232ENST00000560335 HFM1A2PYH4 1435 aa10.31□□□□□ -0.76
NUMB-232ENST00000560335 NCOA2Q15596 1464 aa10.3□□□□□ -0.76
NUMB-232ENST00000560335 PLB1Q6P1J6 1458 aa10.3□□□□□ -0.76
NUMB-232ENST00000560335 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
NUMB-232ENST00000560335 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
NUMB-232ENST00000560335 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
NUMB-232ENST00000560335 MIA2Q96PC5 1412 aa10.29□□□□□ -0.76
NUMB-232ENST00000560335 SCAF1Q9H7N4 1312 aaKnown RBP10.28□□□□□ -0.76
NUMB-232ENST00000560335 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
NUMB-232ENST00000560335 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
NUMB-232ENST00000560335 ITGAEP38570 1179 aa10.27□□□□□ -0.76
NUMB-232ENST00000560335 RAPGEF6Q8TEU7 1601 aa10.27□□□□□ -0.77
NUMB-232ENST00000560335 ABCA8O94911 1581 aa10.27□□□□□ -0.77
NUMB-232ENST00000560335 CDK13Q14004 1512 aaKnown RBP10.27□□□□□ -0.77
NUMB-232ENST00000560335 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.77
NUMB-232ENST00000560335 UACAQ9BZF9 1416 aa10.26□□□□□ -0.77
NUMB-232ENST00000560335 MSH5O43196 834 aa10.26□□□□□ -0.77
NUMB-232ENST00000560335 EPRSP07814 1512 aaKnown RBP10.25□□□□□ -0.77
NUMB-232ENST00000560335 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
NUMB-232ENST00000560335 ABCC2Q92887 1545 aa10.25□□□□□ -0.77
NUMB-232ENST00000560335 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms