RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 CERKQ8TCT0 537 aa19.2■□□□□ 0.66
KNSTRN-209ENST00000560220 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
KNSTRN-209ENST00000560220 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
KNSTRN-209ENST00000560220 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
KNSTRN-209ENST00000560220 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
KNSTRN-209ENST00000560220 PRG4Q92954 1404 aaPredicted RBP19.09■□□□□ 0.65
KNSTRN-209ENST00000560220 NUP160Q12769 1436 aa19.08■□□□□ 0.65
KNSTRN-209ENST00000560220 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
KNSTRN-209ENST00000560220 COL17A1Q9UMD9 1497 aaPredicted RBP19.06■□□□□ 0.64
KNSTRN-209ENST00000560220 ADCY10Q96PN6 1610 aa19.04■□□□□ 0.64
KNSTRN-209ENST00000560220 PPRC1Q5VV67 1664 aaKnown RBP19.02■□□□□ 0.64
KNSTRN-209ENST00000560220 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
KNSTRN-209ENST00000560220 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
KNSTRN-209ENST00000560220 GLI2P10070 1586 aa18.89■□□□□ 0.62
KNSTRN-209ENST00000560220 PTPRMP28827 1452 aa18.89■□□□□ 0.61
KNSTRN-209ENST00000560220 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
KNSTRN-209ENST00000560220 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
KNSTRN-209ENST00000560220 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
KNSTRN-209ENST00000560220 HSPA2P54652 639 aa18.81■□□□□ 0.6
KNSTRN-209ENST00000560220 CUX1P39880 1505 aa18.8■□□□□ 0.6
KNSTRN-209ENST00000560220 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
KNSTRN-209ENST00000560220 KIF21BO75037 1637 aa18.79■□□□□ 0.6
KNSTRN-209ENST00000560220 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
KNSTRN-209ENST00000560220 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
KNSTRN-209ENST00000560220 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
KNSTRN-209ENST00000560220 MAP3K4Q9Y6R4 1608 aa18.73■□□□□ 0.59
KNSTRN-209ENST00000560220 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
KNSTRN-209ENST00000560220 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
KNSTRN-209ENST00000560220 EPRSP07814 1512 aaKnown RBP18.64■□□□□ 0.58
KNSTRN-209ENST00000560220 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
KNSTRN-209ENST00000560220 KIAA0586Q9BVV6 1533 aa18.63■□□□□ 0.57
KNSTRN-209ENST00000560220 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
KNSTRN-209ENST00000560220 PTPRGP23470 1445 aa18.59■□□□□ 0.57
KNSTRN-209ENST00000560220 CUL7Q14999 1698 aa18.59■□□□□ 0.57
KNSTRN-209ENST00000560220 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
KNSTRN-209ENST00000560220 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
KNSTRN-209ENST00000560220 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
KNSTRN-209ENST00000560220 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.55
KNSTRN-209ENST00000560220 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
KNSTRN-209ENST00000560220 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
KNSTRN-209ENST00000560220 RIMS1Q86UR5 1692 aaKnown RBP18.47■□□□□ 0.55
KNSTRN-209ENST00000560220 MAGI3Q5TCQ9 1506 aa18.44■□□□□ 0.54
KNSTRN-209ENST00000560220 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
KNSTRN-209ENST00000560220 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
KNSTRN-209ENST00000560220 UHRF1BP1LA0JNW5 1464 aa18.43■□□□□ 0.54
KNSTRN-209ENST00000560220 WRNQ14191 1432 aaPredicted RBP eCLIP18.42■□□□□ 0.54
KNSTRN-209ENST00000560220 CD109Q6YHK3 1445 aa18.42■□□□□ 0.54
KNSTRN-209ENST00000560220 IQSEC2Q5JU85 1478 aa18.42■□□□□ 0.54
KNSTRN-209ENST00000560220 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
KNSTRN-209ENST00000560220 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
KNSTRN-209ENST00000560220 UACAQ9BZF9 1416 aa18.38■□□□□ 0.53
KNSTRN-209ENST00000560220 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
KNSTRN-209ENST00000560220 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
KNSTRN-209ENST00000560220 ARAP3Q8WWN8 1544 aa18.34■□□□□ 0.53
KNSTRN-209ENST00000560220 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
KNSTRN-209ENST00000560220 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
KNSTRN-209ENST00000560220 ZCCHC11Q5TAX3 1644 aaKnown RBP18.33■□□□□ 0.52
KNSTRN-209ENST00000560220 CARMIL2Q6F5E8 1435 aa18.32■□□□□ 0.52
KNSTRN-209ENST00000560220 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
KNSTRN-209ENST00000560220 WDR7Q9Y4E6 1490 aa18.32■□□□□ 0.52
KNSTRN-209ENST00000560220 KCNH8Q96L42 1107 aa18.29■□□□□ 0.52
KNSTRN-209ENST00000560220 PTPRTO14522 1441 aa18.27■□□□□ 0.52
KNSTRN-209ENST00000560220 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
KNSTRN-209ENST00000560220 PREX1Q8TCU6 1659 aa18.23■□□□□ 0.51
KNSTRN-209ENST00000560220 HSPA1LP34931 641 aa18.23■□□□□ 0.51
KNSTRN-209ENST00000560220 POGZQ7Z3K3 1410 aa18.18■□□□□ 0.5
KNSTRN-209ENST00000560220 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
KNSTRN-209ENST00000560220 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
KNSTRN-209ENST00000560220 MLECQ14165 292 aa18.11■□□□□ 0.49
KNSTRN-209ENST00000560220 TTC37Q6PGP7 1564 aa18.11■□□□□ 0.49
KNSTRN-209ENST00000560220 FANCAO15360 1455 aa18.09■□□□□ 0.49
KNSTRN-209ENST00000560220 UHRF1BP1Q6BDS2 1440 aa18.09■□□□□ 0.49
KNSTRN-209ENST00000560220 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
KNSTRN-209ENST00000560220 PIP4K2BP78356 416 aa18.08■□□□□ 0.48
KNSTRN-209ENST00000560220 CEBPAP49715 358 aaPredicted RBP18.07■□□□□ 0.48
KNSTRN-209ENST00000560220 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
KNSTRN-209ENST00000560220 ARHGEF40Q8TER5 1519 aa18.06■□□□□ 0.48
KNSTRN-209ENST00000560220 FRMPD1Q5SYB0 1578 aa18.04■□□□□ 0.48
KNSTRN-209ENST00000560220 DISP1Q96F81 1524 aa18.02■□□□□ 0.47
KNSTRN-209ENST00000560220 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
KNSTRN-209ENST00000560220 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
KNSTRN-209ENST00000560220 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
KNSTRN-209ENST00000560220 NEO1Q92859 1461 aa17.99■□□□□ 0.47
KNSTRN-209ENST00000560220 TOM1O60784 492 aa17.98■□□□□ 0.47
KNSTRN-209ENST00000560220 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
KNSTRN-209ENST00000560220 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
KNSTRN-209ENST00000560220 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
KNSTRN-209ENST00000560220 IGF1RP08069 1367 aa17.92■□□□□ 0.46
KNSTRN-209ENST00000560220 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
KNSTRN-209ENST00000560220 ARHGEF12Q9NZN5 1544 aa17.88■□□□□ 0.45
KNSTRN-209ENST00000560220 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
KNSTRN-209ENST00000560220 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
KNSTRN-209ENST00000560220 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
KNSTRN-209ENST00000560220 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
KNSTRN-209ENST00000560220 ZFYVE16Q7Z3T8 1539 aa17.85■□□□□ 0.45
KNSTRN-209ENST00000560220 RICTORQ6R327 1708 aa17.84■□□□□ 0.45
KNSTRN-209ENST00000560220 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
KNSTRN-209ENST00000560220 KIAA0556O60303 1618 aa17.83■□□□□ 0.45
KNSTRN-209ENST00000560220 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.45
KNSTRN-209ENST00000560220 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms